RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 PLA2G1BP04054 148 aaKnown RBP9.45□□□□□ -0.9
SCN1B-204ENST00000596348 Q8IZM0 81 aa9.45□□□□□ -0.9
SCN1B-204ENST00000596348 STPG4Q8N801 248 aa9.45□□□□□ -0.9
SCN1B-204ENST00000596348 PACRGQ96M98 296 aaPredicted RBP9.45□□□□□ -0.9
SCN1B-204ENST00000596348 LINC00474Q9P2X8 69 aa9.45□□□□□ -0.9
SCN1B-204ENST00000596348 NUPR1O60356 82 aa9.44□□□□□ -0.9
SCN1B-204ENST00000596348 PRSS2P07478 247 aa9.44□□□□□ -0.9
SCN1B-204ENST00000596348 RPL18AQ02543 176 aaKnown RBP9.44□□□□□ -0.9
SCN1B-204ENST00000596348 SPINK8P0C7L1 97 aa9.43□□□□□ -0.9
SCN1B-204ENST00000596348 INAFM2P0DMQ5 153 aa9.43□□□□□ -0.9
SCN1B-204ENST00000596348 ZNF22P17026 224 aaPredicted RBP9.43□□□□□ -0.9
SCN1B-204ENST00000596348 C9orf116Q5BN46 136 aaPredicted RBP9.43□□□□□ -0.9
SCN1B-204ENST00000596348 IFI27L1Q96BM0 104 aa9.43□□□□□ -0.9
SCN1B-204ENST00000596348 TRBV30A0A0K0K1B3 111 aa9.42□□□□□ -0.9
SCN1B-204ENST00000596348 C11orf86A6NJI1 115 aa9.42□□□□□ -0.9
SCN1B-204ENST00000596348 TLX1NBP0CAT3 122 aa9.42□□□□□ -0.9
SCN1B-204ENST00000596348 C6orf226Q5I0X4 101 aa9.42□□□□□ -0.9
SCN1B-204ENST00000596348 Q6ZRP5 223 aa9.42□□□□□ -0.9
SCN1B-204ENST00000596348 CKS1BP61024 79 aa9.41□□□□□ -0.9
SCN1B-204ENST00000596348 RPL37AP61513 92 aaKnown RBP9.41□□□□□ -0.9
SCN1B-204ENST00000596348 DMBT1Q9UGM3 2413 aaPredicted RBP9.41□□□□□ -0.9
SCN1B-204ENST00000596348 A0A1W2PNN7 141 aa9.4□□□□□ -0.9
SCN1B-204ENST00000596348 HIST1H2BKO60814 126 aa9.4□□□□□ -0.9
SCN1B-204ENST00000596348 HIST1H2BJP06899 126 aa9.4□□□□□ -0.9
SCN1B-204ENST00000596348 HIST1H2BOP23527 126 aa9.4□□□□□ -0.9
SCN1B-204ENST00000596348 HIST1H2BBP33778 126 aa9.4□□□□□ -0.9
SCN1B-204ENST00000596348 HIST1H2BDP58876 126 aa9.4□□□□□ -0.9
SCN1B-204ENST00000596348 HIST1H2BCP62807 126 aa9.4□□□□□ -0.9
SCN1B-204ENST00000596348 HIST2H2BEQ16778 126 aa9.4□□□□□ -0.9
SCN1B-204ENST00000596348 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.4□□□□□ -0.9
SCN1B-204ENST00000596348 COX7B2Q8TF08 81 aa9.4□□□□□ -0.9
SCN1B-204ENST00000596348 HIST1H2BHQ93079 126 aa9.4□□□□□ -0.9
SCN1B-204ENST00000596348 HIST1H2BNQ99877 126 aa9.4□□□□□ -0.9
SCN1B-204ENST00000596348 HIST1H2BMQ99879 126 aa9.4□□□□□ -0.9
SCN1B-204ENST00000596348 TRAV12-1A0A0B4J245 112 aa9.39□□□□□ -0.91
SCN1B-204ENST00000596348 IGLV5-39A0A0G2JS06 123 aa9.39□□□□□ -0.91
SCN1B-204ENST00000596348 H3BRM9 83 aa9.39□□□□□ -0.91
SCN1B-204ENST00000596348 CHTOPQ9Y3Y2 248 aaKnown RBP9.39□□□□□ -0.91
SCN1B-204ENST00000596348 NDUFC2-KCTD14E9PQ53 114 aa9.38□□□□□ -0.91
SCN1B-204ENST00000596348 F8VRH5 84 aa9.38□□□□□ -0.91
SCN1B-204ENST00000596348 GAGE2EQ4V326 116 aa9.38□□□□□ -0.91
SCN1B-204ENST00000596348 GAGE2DQ9UEU5 116 aa9.38□□□□□ -0.91
SCN1B-204ENST00000596348 ATP6V1G1O75348 118 aa9.37□□□□□ -0.91
SCN1B-204ENST00000596348 LEPROTL1O95214 131 aa9.37□□□□□ -0.91
SCN1B-204ENST00000596348 CXCL5P42830 114 aa9.37□□□□□ -0.91
SCN1B-204ENST00000596348 PKHD1L1Q86WI1 4243 aa9.37□□□□□ -0.91
SCN1B-204ENST00000596348 FAM168BA1KXE4 195 aa9.36□□□□□ -0.91
SCN1B-204ENST00000596348 HNRNPA3P51991 378 aaKnown RBP9.36□□□□□ -0.91
SCN1B-204ENST00000596348 TMEM170BQ5T4T1 132 aa9.36□□□□□ -0.91
SCN1B-204ENST00000596348 C7orf33Q8WU49 177 aa9.36□□□□□ -0.91
SCN1B-204ENST00000596348 H0Y8G0 127 aa9.35□□□□□ -0.91
SCN1B-204ENST00000596348 FABP4P15090 132 aa9.35□□□□□ -0.91
SCN1B-204ENST00000596348 ODF1Q14990 250 aa9.35□□□□□ -0.91
SCN1B-204ENST00000596348 C9orf129Q5T035 196 aaKnown RBP9.35□□□□□ -0.91
SCN1B-204ENST00000596348 KRTAP7-1Q8IUC3 87 aa9.35□□□□□ -0.91
SCN1B-204ENST00000596348 S100A1P23297 94 aa9.34□□□□□ -0.91
SCN1B-204ENST00000596348 LRP1Q07954 4544 aaKnown RBP9.33□□□□□ -0.92
SCN1B-204ENST00000596348 HSPB8Q9UJY1 196 aa9.33□□□□□ -0.92
SCN1B-204ENST00000596348 TMEM223A0PJW6 202 aa9.32□□□□□ -0.92
SCN1B-204ENST00000596348 PRR3P79522 188 aaKnown RBP9.32□□□□□ -0.92
SCN1B-204ENST00000596348 PHF5AQ7RTV0 110 aaKnown RBP9.32□□□□□ -0.92
SCN1B-204ENST00000596348 FAM19A5Q7Z5A7 132 aaPredicted RBP9.32□□□□□ -0.92
SCN1B-204ENST00000596348 XAGE1AQ9HD64 81 aa9.32□□□□□ -0.92
SCN1B-204ENST00000596348 COA6Q5JTJ3 125 aaKnown RBP9.29□□□□□ -0.92
SCN1B-204ENST00000596348 KRTAP11-1Q8IUC1 163 aa9.29□□□□□ -0.92
SCN1B-204ENST00000596348 ZNF625Q96I27 306 aaPredicted RBP9.29□□□□□ -0.92
SCN1B-204ENST00000596348 PMCHL2Q9BQD1 86 aa9.29□□□□□ -0.92
SCN1B-204ENST00000596348 FAT3Q8TDW7 4589 aa9.28□□□□□ -0.92
SCN1B-204ENST00000596348 SERTAD4-AS1Q5TG53 156 aa9.28□□□□□ -0.92
SCN1B-204ENST00000596348 M0QXV9 152 aa9.27□□□□□ -0.93
SCN1B-204ENST00000596348 DPM2O94777 84 aa9.26□□□□□ -0.93
SCN1B-204ENST00000596348 PLNP26678 52 aa9.26□□□□□ -0.93
SCN1B-204ENST00000596348 MAP1LC3CQ9BXW4 147 aa9.26□□□□□ -0.93
SCN1B-204ENST00000596348 PSORS1C2Q9UIG4 136 aa9.26□□□□□ -0.93
SCN1B-204ENST00000596348 HERC1Q15751 4861 aa9.25□□□□□ -0.93
SCN1B-204ENST00000596348 PFN2P35080 140 aa9.25□□□□□ -0.93
SCN1B-204ENST00000596348 ERG28Q9UKR5 140 aa9.25□□□□□ -0.93
SCN1B-204ENST00000596348 SYS1-DBNDD2H3BUS1 97 aa9.24□□□□□ -0.93
SCN1B-204ENST00000596348 TSPEAR-AS2P59090 65 aa9.24□□□□□ -0.93
SCN1B-204ENST00000596348 IGKCP01834 107 aa9.23□□□□□ -0.93
SCN1B-204ENST00000596348 SFTA2Q6UW10 78 aa9.23□□□□□ -0.93
SCN1B-204ENST00000596348 KRTAP29-1A8MX34 341 aaPredicted RBP9.22□□□□□ -0.93
SCN1B-204ENST00000596348 SND1-IT1Q9HBX3 110 aa9.22□□□□□ -0.93
SCN1B-204ENST00000596348 C22orf24Q9Y442 160 aa9.22□□□□□ -0.93
SCN1B-204ENST00000596348 COX17Q14061 63 aa9.21□□□□□ -0.94
SCN1B-204ENST00000596348 NDUFA12Q9UI09 145 aa9.21□□□□□ -0.94
SCN1B-204ENST00000596348 PLA2G2DQ9UNK4 145 aa9.21□□□□□ -0.94
SCN1B-204ENST00000596348 LEPROTO15243 131 aa9.2□□□□□ -0.94
SCN1B-204ENST00000596348 C3orf79P0CE67 100 aa9.2□□□□□ -0.94
SCN1B-204ENST00000596348 SRSF9Q13242 221 aaKnown RBP eCLIP9.2□□□□□ -0.94
SCN1B-204ENST00000596348 C1orf137Q5JT78 98 aa9.2□□□□□ -0.94
SCN1B-204ENST00000596348 LINC01545Q5VT33 79 aa9.2□□□□□ -0.94
SCN1B-204ENST00000596348 UBE2BP63146 152 aa9.19□□□□□ -0.94
SCN1B-204ENST00000596348 PET117Q6UWS5 81 aa9.19□□□□□ -0.94
SCN1B-204ENST00000596348 PLEKHB2Q96CS7 222 aa9.19□□□□□ -0.94
SCN1B-204ENST00000596348 TP73-AS1Q9UF72 201 aa9.19□□□□□ -0.94
SCN1B-204ENST00000596348 IGLV5-37A0A075B6J1 123 aa9.18□□□□□ -0.94
SCN1B-204ENST00000596348 A0A0U1RRA0 63 aa9.18□□□□□ -0.94
SCN1B-204ENST00000596348 OXTP01178 125 aa9.18□□□□□ -0.94
SCN1B-204ENST00000596348 LINC00158P58513 81 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms