RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 RNF151Q2KHN1 245 aa8.71□□□□□ -1.02
SHKBP1-207ENST00000595631 Q8IZM0 81 aa8.71□□□□□ -1.02
SHKBP1-207ENST00000595631 STPG4Q8N801 248 aa8.71□□□□□ -1.02
SHKBP1-207ENST00000595631 PLAC8Q9NZF1 115 aa8.71□□□□□ -1.02
SHKBP1-207ENST00000595631 HIST1H2BKO60814 126 aa8.7□□□□□ -1.02
SHKBP1-207ENST00000595631 HIST1H2BJP06899 126 aa8.7□□□□□ -1.02
SHKBP1-207ENST00000595631 ZNF22P17026 224 aaPredicted RBP8.7□□□□□ -1.02
SHKBP1-207ENST00000595631 HIST1H2BOP23527 126 aa8.7□□□□□ -1.02
SHKBP1-207ENST00000595631 HIST1H2BBP33778 126 aa8.7□□□□□ -1.02
SHKBP1-207ENST00000595631 HIST1H2BDP58876 126 aa8.7□□□□□ -1.02
SHKBP1-207ENST00000595631 HIST1H2BCP62807 126 aa8.7□□□□□ -1.02
SHKBP1-207ENST00000595631 HIST2H2BEQ16778 126 aa8.7□□□□□ -1.02
SHKBP1-207ENST00000595631 C9orf116Q5BN46 136 aaPredicted RBP8.7□□□□□ -1.02
SHKBP1-207ENST00000595631 C6orf226Q5I0X4 101 aa8.7□□□□□ -1.02
SHKBP1-207ENST00000595631 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.7□□□□□ -1.02
SHKBP1-207ENST00000595631 HIST1H2BHQ93079 126 aa8.7□□□□□ -1.02
SHKBP1-207ENST00000595631 HIST1H2BNQ99877 126 aa8.7□□□□□ -1.02
SHKBP1-207ENST00000595631 HIST1H2BMQ99879 126 aa8.7□□□□□ -1.02
SHKBP1-207ENST00000595631 PKIGQ9Y2B9 76 aa8.7□□□□□ -1.02
SHKBP1-207ENST00000595631 CKS1BP61024 79 aa8.69□□□□□ -1.02
SHKBP1-207ENST00000595631 COX7B2Q8TF08 81 aa8.69□□□□□ -1.02
SHKBP1-207ENST00000595631 CHTOPQ9Y3Y2 248 aaKnown RBP8.69□□□□□ -1.02
SHKBP1-207ENST00000595631 VPS13BQ7Z7G8 4022 aa8.69□□□□□ -1.02
SHKBP1-207ENST00000595631 H0Y8G0 127 aa8.68□□□□□ -1.02
SHKBP1-207ENST00000595631 KRTAP10-4P60372 401 aaPredicted RBP8.68□□□□□ -1.02
SHKBP1-207ENST00000595631 Q6ZRP5 223 aa8.68□□□□□ -1.02
SHKBP1-207ENST00000595631 TRBV30A0A0K0K1B3 111 aa8.67□□□□□ -1.02
SHKBP1-207ENST00000595631 A0A1W2PNN7 141 aa8.67□□□□□ -1.02
SHKBP1-207ENST00000595631 H3BRM9 83 aa8.67□□□□□ -1.02
SHKBP1-207ENST00000595631 LEPROTL1O95214 131 aa8.67□□□□□ -1.02
SHKBP1-207ENST00000595631 PLA2G1BP04054 148 aaKnown RBP8.67□□□□□ -1.02
SHKBP1-207ENST00000595631 TLX1NBP0CAT3 122 aa8.67□□□□□ -1.02
SHKBP1-207ENST00000595631 INAFM2P0DMQ5 153 aa8.67□□□□□ -1.02
SHKBP1-207ENST00000595631 FABP4P15090 132 aa8.67□□□□□ -1.02
SHKBP1-207ENST00000595631 GAGE2EQ4V326 116 aa8.67□□□□□ -1.02
SHKBP1-207ENST00000595631 LINC00474Q9P2X8 69 aa8.67□□□□□ -1.02
SHKBP1-207ENST00000595631 GAGE2DQ9UEU5 116 aa8.67□□□□□ -1.02
SHKBP1-207ENST00000595631 TRAV12-1A0A0B4J245 112 aa8.66□□□□□ -1.02
SHKBP1-207ENST00000595631 RPL37AP61513 92 aaKnown RBP8.66□□□□□ -1.02
SHKBP1-207ENST00000595631 TMEM170BQ5T4T1 132 aa8.66□□□□□ -1.02
SHKBP1-207ENST00000595631 TMA7Q9Y2S6 64 aaKnown RBP8.66□□□□□ -1.02
SHKBP1-207ENST00000595631 IGLV5-39A0A0G2JS06 123 aa8.65□□□□□ -1.02
SHKBP1-207ENST00000595631 FAM168BA1KXE4 195 aa8.65□□□□□ -1.02
SHKBP1-207ENST00000595631 ABCA13Q86UQ4 5058 aa8.64□□□□□ -1.03
SHKBP1-207ENST00000595631 F8VRH5 84 aa8.64□□□□□ -1.03
SHKBP1-207ENST00000595631 ODF1Q14990 250 aa8.64□□□□□ -1.03
SHKBP1-207ENST00000595631 NDUFC2-KCTD14E9PQ53 114 aa8.63□□□□□ -1.03
SHKBP1-207ENST00000595631 S100A6P06703 90 aa8.63□□□□□ -1.03
SHKBP1-207ENST00000595631 CXCL5P42830 114 aa8.63□□□□□ -1.03
SHKBP1-207ENST00000595631 HNRNPA3P51991 378 aaKnown RBP8.62□□□□□ -1.03
SHKBP1-207ENST00000595631 COA6Q5JTJ3 125 aaKnown RBP8.62□□□□□ -1.03
SHKBP1-207ENST00000595631 C9orf129Q5T035 196 aaKnown RBP8.62□□□□□ -1.03
SHKBP1-207ENST00000595631 KRTAP7-1Q8IUC3 87 aa8.62□□□□□ -1.03
SHKBP1-207ENST00000595631 PMCHL2Q9BQD1 86 aa8.62□□□□□ -1.03
SHKBP1-207ENST00000595631 HSPB8Q9UJY1 196 aa8.62□□□□□ -1.03
SHKBP1-207ENST00000595631 SRRM2Q9UQ35 2752 aaKnown RBP8.61□□□□□ -1.03
SHKBP1-207ENST00000595631 TMEM223A0PJW6 202 aa8.61□□□□□ -1.03
SHKBP1-207ENST00000595631 FAM19A5Q7Z5A7 132 aaPredicted RBP8.61□□□□□ -1.03
SHKBP1-207ENST00000595631 C7orf33Q8WU49 177 aa8.61□□□□□ -1.03
SHKBP1-207ENST00000595631 PCLOQ9Y6V0 5065 aa8.61□□□□□ -1.03
SHKBP1-207ENST00000595631 PHF5AQ7RTV0 110 aaKnown RBP8.6□□□□□ -1.03
SHKBP1-207ENST00000595631 XAGE1AQ9HD64 81 aa8.6□□□□□ -1.03
SHKBP1-207ENST00000595631 FLG2Q5D862 2391 aaPredicted RBP8.59□□□□□ -1.03
SHKBP1-207ENST00000595631 PKHD1L1Q86WI1 4243 aa8.59□□□□□ -1.03
SHKBP1-207ENST00000595631 C5orf52A6NGY3 159 aa8.59□□□□□ -1.03
SHKBP1-207ENST00000595631 ZNF625Q96I27 306 aaPredicted RBP8.58□□□□□ -1.04
SHKBP1-207ENST00000595631 MAP1LC3CQ9BXW4 147 aa8.58□□□□□ -1.04
SHKBP1-207ENST00000595631 SNRPEP62304 92 aaKnown RBP8.57□□□□□ -1.04
SHKBP1-207ENST00000595631 PRR3P79522 188 aaKnown RBP8.57□□□□□ -1.04
SHKBP1-207ENST00000595631 SERTAD4-AS1Q5TG53 156 aa8.57□□□□□ -1.04
SHKBP1-207ENST00000595631 DPM2O94777 84 aa8.56□□□□□ -1.04
SHKBP1-207ENST00000595631 PFN2P35080 140 aa8.56□□□□□ -1.04
SHKBP1-207ENST00000595631 KRTAP11-1Q8IUC1 163 aa8.56□□□□□ -1.04
SHKBP1-207ENST00000595631 SYS1-DBNDD2H3BUS1 97 aa8.55□□□□□ -1.04
SHKBP1-207ENST00000595631 M0QXV9 152 aa8.55□□□□□ -1.04
SHKBP1-207ENST00000595631 ERG28Q9UKR5 140 aa8.55□□□□□ -1.04
SHKBP1-207ENST00000595631 LOC105371267A0A1B0GV96 52 aa8.54□□□□□ -1.04
SHKBP1-207ENST00000595631 IGKCP01834 107 aa8.54□□□□□ -1.04
SHKBP1-207ENST00000595631 PLNP26678 52 aa8.54□□□□□ -1.04
SHKBP1-207ENST00000595631 TSPEAR-AS2P59090 65 aa8.54□□□□□ -1.04
SHKBP1-207ENST00000595631 PSORS1C2Q9UIG4 136 aa8.53□□□□□ -1.04
SHKBP1-207ENST00000595631 C3orf79P0CE67 100 aa8.52□□□□□ -1.05
SHKBP1-207ENST00000595631 A0A0U1RRA0 63 aa8.51□□□□□ -1.05
SHKBP1-207ENST00000595631 LEPROTO15243 131 aa8.51□□□□□ -1.05
SHKBP1-207ENST00000595631 S100A2P29034 98 aa8.51□□□□□ -1.05
SHKBP1-207ENST00000595631 HIST3H2BBQ8N257 126 aa8.51□□□□□ -1.05
SHKBP1-207ENST00000595631 C22orf24Q9Y442 160 aa8.51□□□□□ -1.05
SHKBP1-207ENST00000595631 KRTDAPP60985 99 aa8.5□□□□□ -1.05
SHKBP1-207ENST00000595631 LINC01545Q5VT33 79 aa8.5□□□□□ -1.05
SHKBP1-207ENST00000595631 SND1-IT1Q9HBX3 110 aa8.5□□□□□ -1.05
SHKBP1-207ENST00000595631 NDUFA12Q9UI09 145 aa8.5□□□□□ -1.05
SHKBP1-207ENST00000595631 LINC00158P58513 81 aa8.49□□□□□ -1.05
SHKBP1-207ENST00000595631 HERVK_113P61574 105 aa8.49□□□□□ -1.05
SHKBP1-207ENST00000595631 UBE2BP63146 152 aa8.49□□□□□ -1.05
SHKBP1-207ENST00000595631 C1orf137Q5JT78 98 aa8.49□□□□□ -1.05
SHKBP1-207ENST00000595631 SFTA2Q6UW10 78 aa8.49□□□□□ -1.05
SHKBP1-207ENST00000595631 PET117Q6UWS5 81 aa8.49□□□□□ -1.05
SHKBP1-207ENST00000595631 J3QQQ9 107 aa8.48□□□□□ -1.05
SHKBP1-207ENST00000595631 SMIM13P0DJ93 91 aa8.48□□□□□ -1.05
SHKBP1-207ENST00000595631 COX17Q14061 63 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms