RNA–Protein interactions for RNA: ENST00000595343.5

PDE4C-208, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 420 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-208ENST00000595343 LINC01549A6NIU2 74 aa11.38□□□□□ -0.59
PDE4C-208ENST00000595343 TSTD3H0UI37 97 aa11.38□□□□□ -0.59
PDE4C-208ENST00000595343 SYS1-DBNDD2H3BUS1 97 aa11.38□□□□□ -0.59
PDE4C-208ENST00000595343 MALP21145 153 aa11.38□□□□□ -0.59
PDE4C-208ENST00000595343 C9orf116Q5BN46 136 aaPredicted RBP11.38□□□□□ -0.59
PDE4C-208ENST00000595343 COX7A2LO14548 114 aa11.37□□□□□ -0.59
PDE4C-208ENST00000595343 APOMO95445 188 aa11.37□□□□□ -0.59
PDE4C-208ENST00000595343 POLR2KP53803 58 aaKnown RBP11.37□□□□□ -0.59
PDE4C-208ENST00000595343 ORMDL2Q53FV1 153 aa11.37□□□□□ -0.59
PDE4C-208ENST00000595343 CAMK2N2Q96S95 79 aa11.37□□□□□ -0.59
PDE4C-208ENST00000595343 TRBV27A0A0K0K1C4 114 aa11.36□□□□□ -0.59
PDE4C-208ENST00000595343 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.36□□□□□ -0.59
PDE4C-208ENST00000595343 G0S2P27469 103 aa11.36□□□□□ -0.59
PDE4C-208ENST00000595343 C1orf137Q5JT78 98 aa11.36□□□□□ -0.59
PDE4C-208ENST00000595343 TCAPO15273 167 aa11.35□□□□□ -0.59
PDE4C-208ENST00000595343 RPL18AQ02543 176 aaKnown RBP11.34□□□□□ -0.59
PDE4C-208ENST00000595343 PHF5AQ7RTV0 110 aaKnown RBP11.34□□□□□ -0.59
PDE4C-208ENST00000595343 C2orf48Q96LS8 159 aa11.34□□□□□ -0.59
PDE4C-208ENST00000595343 VAMP8Q9BV40 100 aa11.34□□□□□ -0.59
PDE4C-208ENST00000595343 PCP4L1A6NKN8 68 aa11.33□□□□□ -0.6
PDE4C-208ENST00000595343 VCYO14598 125 aa11.33□□□□□ -0.6
PDE4C-208ENST00000595343 ATP5LO75964 103 aa11.33□□□□□ -0.6
PDE4C-208ENST00000595343 LINC01545Q5VT33 79 aa11.33□□□□□ -0.6
PDE4C-208ENST00000595343 LINC00173Q6ZV60 143 aa11.33□□□□□ -0.6
PDE4C-208ENST00000595343 PRR26Q8N8Z3 221 aa11.33□□□□□ -0.6
PDE4C-208ENST00000595343 RNASE13Q5GAN3 156 aaKnown RBP11.32□□□□□ -0.6
PDE4C-208ENST00000595343 IFI27L1Q96BM0 104 aa11.32□□□□□ -0.6
PDE4C-208ENST00000595343 OPRPNQ99935 248 aaPredicted RBP11.32□□□□□ -0.6
PDE4C-208ENST00000595343 CSDC2Q9Y534 153 aaKnown RBP11.32□□□□□ -0.6
PDE4C-208ENST00000595343 TRAV13-1A0A0B4J241 112 aa11.31□□□□□ -0.6
PDE4C-208ENST00000595343 C5orf38Q86SI9 138 aa11.31□□□□□ -0.6
PDE4C-208ENST00000595343 DIRC1Q969H9 104 aa11.31□□□□□ -0.6
PDE4C-208ENST00000595343 UBE2D4Q9Y2X8 147 aa11.31□□□□□ -0.6
PDE4C-208ENST00000595343 IGLV7-43P04211 117 aa11.3□□□□□ -0.6
PDE4C-208ENST00000595343 RNF151Q2KHN1 245 aa11.3□□□□□ -0.6
PDE4C-208ENST00000595343 KIR2DL4Q99706 377 aa11.3□□□□□ -0.6
PDE4C-208ENST00000595343 SPAG11BQ08648 103 aa11.29□□□□□ -0.6
PDE4C-208ENST00000595343 TOMM6Q96B49 74 aa11.29□□□□□ -0.6
PDE4C-208ENST00000595343 SMAGPQ0VAQ4 97 aa11.28□□□□□ -0.6
PDE4C-208ENST00000595343 A0A087WZ39 114 aa11.26□□□□□ -0.61
PDE4C-208ENST00000595343 H0Y9J4 135 aa11.26□□□□□ -0.61
PDE4C-208ENST00000595343 DDTP30046 118 aa11.26□□□□□ -0.61
PDE4C-208ENST00000595343 Q6ZUT4 128 aa11.26□□□□□ -0.61
PDE4C-208ENST00000595343 KRTAP11-1Q8IUC1 163 aa11.26□□□□□ -0.61
PDE4C-208ENST00000595343 PRO1933Q9H354 126 aa11.26□□□□□ -0.61
PDE4C-208ENST00000595343 SPATA45Q537H7 98 aa11.25□□□□□ -0.61
PDE4C-208ENST00000595343 MRPL35Q9NZE8 188 aaKnown RBP11.25□□□□□ -0.61
PDE4C-208ENST00000595343 CYSLTR1Q9Y271 337 aa11.25□□□□□ -0.61
PDE4C-208ENST00000595343 PAM16Q9Y3D7 125 aa11.25□□□□□ -0.61
PDE4C-208ENST00000595343 TRAV12-1A0A0B4J245 112 aa11.24□□□□□ -0.61
PDE4C-208ENST00000595343 FAM168BA1KXE4 195 aa11.24□□□□□ -0.61
PDE4C-208ENST00000595343 HSBP1L1C9JCN9 74 aa11.24□□□□□ -0.61
PDE4C-208ENST00000595343 C2orf66Q6UXQ4 117 aa11.24□□□□□ -0.61
PDE4C-208ENST00000595343 ERASQ7Z444 233 aa11.24□□□□□ -0.61
PDE4C-208ENST00000595343 TIMM21Q9BVV7 248 aa11.24□□□□□ -0.61
PDE4C-208ENST00000595343 IGLV1-50A0A075B6I6 118 aa11.23□□□□□ -0.61
PDE4C-208ENST00000595343 ORAOV1Q8WV07 137 aa11.23□□□□□ -0.61
PDE4C-208ENST00000595343 MIEN1Q9BRT3 115 aa11.23□□□□□ -0.61
PDE4C-208ENST00000595343 MUC2Q02817 5179 aa11.23□□□□□ -0.61
PDE4C-208ENST00000595343 LINC00587B1AMM8 73 aa11.22□□□□□ -0.61
PDE4C-208ENST00000595343 F8WDY8 70 aa11.22□□□□□ -0.61
PDE4C-208ENST00000595343 TMEM141Q96I45 108 aa11.22□□□□□ -0.61
PDE4C-208ENST00000595343 SCGB3A1Q96QR1 104 aa11.22□□□□□ -0.61
PDE4C-208ENST00000595343 TIMM17AQ99595 171 aa11.22□□□□□ -0.61
PDE4C-208ENST00000595343 NDUFA1O15239 70 aa11.21□□□□□ -0.61
PDE4C-208ENST00000595343 KRTAP1-4P0C5Y4 121 aa11.21□□□□□ -0.61
PDE4C-208ENST00000595343 C10orf25Q5T742 122 aa11.21□□□□□ -0.61
PDE4C-208ENST00000595343 Q6ZN92 141 aa11.21□□□□□ -0.61
PDE4C-208ENST00000595343 FAM19A5Q7Z5A7 132 aaPredicted RBP11.21□□□□□ -0.61
PDE4C-208ENST00000595343 IGHV3OR16-9A0A0B4J2B5 98 aa11.2□□□□□ -0.62
PDE4C-208ENST00000595343 NPSP0C0P6 89 aa11.2□□□□□ -0.62
PDE4C-208ENST00000595343 TLX1NBP0CAT3 122 aa11.2□□□□□ -0.62
PDE4C-208ENST00000595343 IGLC3P0DOY3 106 aa11.2□□□□□ -0.62
PDE4C-208ENST00000595343 ATOH7Q8N100 152 aa11.2□□□□□ -0.62
PDE4C-208ENST00000595343 UQCR10Q9UDW1 63 aa11.2□□□□□ -0.62
PDE4C-208ENST00000595343 H0Y8G0 127 aa11.19□□□□□ -0.62
PDE4C-208ENST00000595343 PRR4Q16378 134 aa11.19□□□□□ -0.62
PDE4C-208ENST00000595343 UNQ6190/PRO20217Q6UXQ8 127 aa11.19□□□□□ -0.62
PDE4C-208ENST00000595343 FAM104AQ969W3 186 aa11.19□□□□□ -0.62
PDE4C-208ENST00000595343 IGIPA6NJ69 53 aa11.18□□□□□ -0.62
PDE4C-208ENST00000595343 RPL39P62891 51 aaKnown RBP11.18□□□□□ -0.62
PDE4C-208ENST00000595343 GAGE2EQ4V326 116 aa11.18□□□□□ -0.62
PDE4C-208ENST00000595343 KRTAP7-1Q8IUC3 87 aa11.18□□□□□ -0.62
PDE4C-208ENST00000595343 C6orf48Q9UBA6 75 aa11.18□□□□□ -0.62
PDE4C-208ENST00000595343 GAGE2DQ9UEU5 116 aa11.18□□□□□ -0.62
PDE4C-208ENST00000595343 DPM2O94777 84 aa11.17□□□□□ -0.62
PDE4C-208ENST00000595343 PLNP26678 52 aa11.17□□□□□ -0.62
PDE4C-208ENST00000595343 UBE2D1P51668 147 aa11.17□□□□□ -0.62
PDE4C-208ENST00000595343 F8VRH5 84 aa11.16□□□□□ -0.62
PDE4C-208ENST00000595343 IGKCP01834 107 aa11.16□□□□□ -0.62
PDE4C-208ENST00000595343 PAPPA-AS1Q5QFB9 102 aa11.16□□□□□ -0.62
PDE4C-208ENST00000595343 PMCHL2Q9BQD1 86 aa11.16□□□□□ -0.62
PDE4C-208ENST00000595343 PYGO1Q9Y3Y4 419 aa11.16□□□□□ -0.62
PDE4C-208ENST00000595343 M0QXV9 152 aa11.15□□□□□ -0.62
PDE4C-208ENST00000595343 UBE2BP63146 152 aa11.15□□□□□ -0.62
PDE4C-208ENST00000595343 RPL13AP40429 203 aaKnown RBP11.14□□□□□ -0.63
PDE4C-208ENST00000595343 SPANXA1Q9NS26 97 aa11.14□□□□□ -0.63
PDE4C-208ENST00000595343 MRPS36P82909 103 aaKnown RBP11.13□□□□□ -0.63
PDE4C-208ENST00000595343 PMVKQ15126 192 aa11.13□□□□□ -0.63
PDE4C-208ENST00000595343 CHTOPQ9Y3Y2 248 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms