RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 A0A1B0GUT8 65 aa4.56□□□□□ -1.68
VAT1-209ENST00000592388 POLR2KP53803 58 aaKnown RBP4.56□□□□□ -1.68
VAT1-209ENST00000592388 SPATA45Q537H7 98 aa4.56□□□□□ -1.68
VAT1-209ENST00000592388 CT83Q5H943 113 aa4.56□□□□□ -1.68
VAT1-209ENST00000592388 Q6ZUT4 128 aa4.56□□□□□ -1.68
VAT1-209ENST00000592388 BORCS7Q96B45 105 aa4.56□□□□□ -1.68
VAT1-209ENST00000592388 TMEM101Q96IK0 257 aa4.56□□□□□ -1.68
VAT1-209ENST00000592388 TMEM191AQ9H0A3 160 aa4.56□□□□□ -1.68
VAT1-209ENST00000592388 CDC42SE2Q9NRR3 84 aa4.56□□□□□ -1.68
VAT1-209ENST00000592388 GAGE10A6NGK3 116 aa4.55□□□□□ -1.68
VAT1-209ENST00000592388 ZNF727A8MUV8 499 aa4.55□□□□□ -1.68
VAT1-209ENST00000592388 CAMPP49913 170 aa4.55□□□□□ -1.68
VAT1-209ENST00000592388 SYCNQ0VAF6 134 aa4.55□□□□□ -1.68
VAT1-209ENST00000592388 SS18Q15532 418 aa4.55□□□□□ -1.68
VAT1-209ENST00000592388 CD164L2Q6UWJ8 174 aa4.55□□□□□ -1.68
VAT1-209ENST00000592388 NRACQ8N912 160 aa4.55□□□□□ -1.68
VAT1-209ENST00000592388 TSKUQ8WUA8 353 aa4.55□□□□□ -1.68
VAT1-209ENST00000592388 PAM16Q9Y3D7 125 aa4.55□□□□□ -1.68
VAT1-209ENST00000592388 V9GYV3 84 aa4.55□□□□□ -1.68
VAT1-209ENST00000592388 MUC17Q685J3 4493 aa4.54□□□□□ -1.68
VAT1-209ENST00000592388 IGLV4-69A0A075B6H9 119 aa4.54□□□□□ -1.68
VAT1-209ENST00000592388 TRBV27A0A0K0K1C4 114 aa4.54□□□□□ -1.68
VAT1-209ENST00000592388 A0A1W2PNN7 141 aa4.54□□□□□ -1.68
VAT1-209ENST00000592388 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.54□□□□□ -1.68
VAT1-209ENST00000592388 ZNF561-AS1K7EIQ3 104 aa4.54□□□□□ -1.68
VAT1-209ENST00000592388 GAGE2BQ13066 116 aa4.54□□□□□ -1.68
VAT1-209ENST00000592388 SPINK6Q6UWN8 80 aa4.54□□□□□ -1.68
VAT1-209ENST00000592388 NUP35Q8NFH5 326 aa4.54□□□□□ -1.68
VAT1-209ENST00000592388 OSTCQ9NRP0 149 aa4.54□□□□□ -1.68
VAT1-209ENST00000592388 UBE2D4Q9Y2X8 147 aa4.54□□□□□ -1.68
VAT1-209ENST00000592388 TRAPPC1Q9Y5R8 145 aa4.54□□□□□ -1.68
VAT1-209ENST00000592388 TRAV13-1A0A0B4J241 112 aa4.53□□□□□ -1.68
VAT1-209ENST00000592388 FCER1GP30273 86 aa4.53□□□□□ -1.68
VAT1-209ENST00000592388 SUMO2P61956 95 aaKnown RBP4.53□□□□□ -1.68
VAT1-209ENST00000592388 HSD52Q0P140 79 aa4.53□□□□□ -1.68
VAT1-209ENST00000592388 MRPL51Q4U2R6 128 aaKnown RBP4.53□□□□□ -1.68
VAT1-209ENST00000592388 C5orf47Q569G3 176 aa4.53□□□□□ -1.68
VAT1-209ENST00000592388 C5orf38Q86SI9 138 aa4.53□□□□□ -1.68
VAT1-209ENST00000592388 GEMIN7Q9H840 131 aaKnown RBP4.53□□□□□ -1.68
VAT1-209ENST00000592388 A0A1B0GW15 77 aa4.52□□□□□ -1.69
VAT1-209ENST00000592388 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.52□□□□□ -1.69
VAT1-209ENST00000592388 COX7A2LO14548 114 aa4.52□□□□□ -1.69
VAT1-209ENST00000592388 MALP21145 153 aa4.52□□□□□ -1.69
VAT1-209ENST00000592388 RPL23P62829 140 aaKnown RBP4.52□□□□□ -1.69
VAT1-209ENST00000592388 RPL39P62891 51 aaKnown RBP4.52□□□□□ -1.69
VAT1-209ENST00000592388 RPL18AQ02543 176 aaKnown RBP4.52□□□□□ -1.69
VAT1-209ENST00000592388 SPAG11BQ08648 103 aa4.52□□□□□ -1.69
VAT1-209ENST00000592388 RIGQ13278 110 aa4.52□□□□□ -1.69
VAT1-209ENST00000592388 CAMK2N2Q96S95 79 aa4.52□□□□□ -1.69
VAT1-209ENST00000592388 OPRPNQ99935 248 aaPredicted RBP4.52□□□□□ -1.69
VAT1-209ENST00000592388 LINC00474Q9P2X8 69 aa4.52□□□□□ -1.69
VAT1-209ENST00000592388 LOC107984640A0A0U1RRK4 108 aa4.51□□□□□ -1.69
VAT1-209ENST00000592388 K7EP34 96 aa4.51□□□□□ -1.69
VAT1-209ENST00000592388 VCYO14598 125 aa4.51□□□□□ -1.69
VAT1-209ENST00000592388 APOMO95445 188 aa4.51□□□□□ -1.69
VAT1-209ENST00000592388 SRSF9Q13242 221 aaKnown RBP eCLIP4.51□□□□□ -1.69
VAT1-209ENST00000592388 C9orf116Q5BN46 136 aaPredicted RBP4.51□□□□□ -1.69
VAT1-209ENST00000592388 Q6ZRP5 223 aa4.51□□□□□ -1.69
VAT1-209ENST00000592388 PHF5AQ7RTV0 110 aaKnown RBP4.51□□□□□ -1.69
VAT1-209ENST00000592388 BAGE3Q86Y29 109 aa4.51□□□□□ -1.69
VAT1-209ENST00000592388 FAM104AQ969W3 186 aa4.51□□□□□ -1.69
VAT1-209ENST00000592388 KIR2DL4Q99706 377 aa4.51□□□□□ -1.69
VAT1-209ENST00000592388 CYSLTR1Q9Y271 337 aa4.51□□□□□ -1.69
VAT1-209ENST00000592388 PKIGQ9Y2B9 76 aa4.51□□□□□ -1.69
VAT1-209ENST00000592388 FAM168BA1KXE4 195 aa4.5□□□□□ -1.69
VAT1-209ENST00000592388 F8W1H4 67 aa4.5□□□□□ -1.69
VAT1-209ENST00000592388 H3BRM9 83 aa4.5□□□□□ -1.69
VAT1-209ENST00000592388 TAX1BP3O14907 124 aa4.5□□□□□ -1.69
VAT1-209ENST00000592388 HINT1P49773 126 aaPredicted RBP4.5□□□□□ -1.69
VAT1-209ENST00000592388 FAM104BQ5XKR9 115 aa4.5□□□□□ -1.69
VAT1-209ENST00000592388 SLC25A34Q6PIV7 304 aa4.5□□□□□ -1.69
VAT1-209ENST00000592388 ERASQ7Z444 233 aa4.5□□□□□ -1.69
VAT1-209ENST00000592388 TMEM126AQ9H061 195 aa4.5□□□□□ -1.69
VAT1-209ENST00000592388 NAT8BQ9UHF3 227 aa4.5□□□□□ -1.69
VAT1-209ENST00000592388 PSORS1C2Q9UIG4 136 aa4.5□□□□□ -1.69
VAT1-209ENST00000592388 ERG28Q9UKR5 140 aa4.5□□□□□ -1.69
VAT1-209ENST00000592388 CSDC2Q9Y534 153 aaKnown RBP4.5□□□□□ -1.69
VAT1-209ENST00000592388 SMIM27A0A1W2PRY6 76 aa4.49□□□□□ -1.69
VAT1-209ENST00000592388 C9orf118A6NHY6 69 aa4.49□□□□□ -1.69
VAT1-209ENST00000592388 NPYP01303 97 aa4.49□□□□□ -1.69
VAT1-209ENST00000592388 KRTDAPP60985 99 aa4.49□□□□□ -1.69
VAT1-209ENST00000592388 SMAGPQ0VAQ4 97 aa4.49□□□□□ -1.69
VAT1-209ENST00000592388 C10orf25Q5T742 122 aa4.49□□□□□ -1.69
VAT1-209ENST00000592388 LCE2CQ5TA81 110 aa4.49□□□□□ -1.69
VAT1-209ENST00000592388 KRTAP11-1Q8IUC1 163 aa4.49□□□□□ -1.69
VAT1-209ENST00000592388 SMIM2Q9BVW6 85 aa4.49□□□□□ -1.69
VAT1-209ENST00000592388 GNB1LQ9BYB4 327 aa4.49□□□□□ -1.69
VAT1-209ENST00000592388 HSPB8Q9UJY1 196 aa4.49□□□□□ -1.69
VAT1-209ENST00000592388 D6R8Y8 96 aa4.48□□□□□ -1.69
VAT1-209ENST00000592388 TNFRSF6BO95407 300 aa4.48□□□□□ -1.69
VAT1-209ENST00000592388 PPP1R17O96001 155 aa4.48□□□□□ -1.69
VAT1-209ENST00000592388 FABP2P12104 132 aa4.48□□□□□ -1.69
VAT1-209ENST00000592388 CKS2P33552 79 aa4.48□□□□□ -1.69
VAT1-209ENST00000592388 LINC01547P58512 204 aaPredicted RBP4.48□□□□□ -1.69
VAT1-209ENST00000592388 HERV-K104P63124 156 aa4.48□□□□□ -1.69
VAT1-209ENST00000592388 C1orf137Q5JT78 98 aa4.48□□□□□ -1.69
VAT1-209ENST00000592388 BVES-AS1Q5T3Y7 98 aa4.48□□□□□ -1.69
VAT1-209ENST00000592388 C2orf48Q96LS8 159 aa4.48□□□□□ -1.69
VAT1-209ENST00000592388 TIMM21Q9BVV7 248 aa4.48□□□□□ -1.69
VAT1-209ENST00000592388 IGHV3OR16-9A0A0B4J2B5 98 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms