RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 E9PLD3 99 aa9.85□□□□□ -0.83
ATG4D-211ENST00000589753 UNQ6190/PRO20217Q6UXQ8 127 aa9.85□□□□□ -0.83
ATG4D-211ENST00000589753 PLEKHB2Q96CS7 222 aa9.85□□□□□ -0.83
ATG4D-211ENST00000589753 C10orf25Q5T742 122 aa9.84□□□□□ -0.83
ATG4D-211ENST00000589753 C9orf163Q8N9P6 203 aa9.84□□□□□ -0.83
ATG4D-211ENST00000589753 J3QQQ9 107 aa9.83□□□□□ -0.84
ATG4D-211ENST00000589753 TRBV30A0A0K0K1B3 111 aa9.82□□□□□ -0.84
ATG4D-211ENST00000589753 HSBP1L1C9JCN9 74 aa9.82□□□□□ -0.84
ATG4D-211ENST00000589753 LGALS3P17931 250 aaKnown RBP9.82□□□□□ -0.84
ATG4D-211ENST00000589753 TSPEAR-AS2P59090 65 aa9.82□□□□□ -0.84
ATG4D-211ENST00000589753 RNF151Q2KHN1 245 aa9.82□□□□□ -0.84
ATG4D-211ENST00000589753 MAJINQ3KP22 176 aa9.82□□□□□ -0.84
ATG4D-211ENST00000589753 SFTA2Q6UW10 78 aa9.82□□□□□ -0.84
ATG4D-211ENST00000589753 C6orf48Q9UBA6 75 aa9.82□□□□□ -0.84
ATG4D-211ENST00000589753 LINC01620Q4KN68 170 aa9.81□□□□□ -0.84
ATG4D-211ENST00000589753 ANKRD39Q53RE8 183 aa9.81□□□□□ -0.84
ATG4D-211ENST00000589753 PYY3Q5JQD4 70 aa9.81□□□□□ -0.84
ATG4D-211ENST00000589753 ZNF625Q96I27 306 aaPredicted RBP9.81□□□□□ -0.84
ATG4D-211ENST00000589753 NDUFA12Q9UI09 145 aa9.81□□□□□ -0.84
ATG4D-211ENST00000589753 FAT2Q9NYQ8 4349 aa9.81□□□□□ -0.84
ATG4D-211ENST00000589753 IGKV2D-26A0A0A0MRZ7 120 aa9.8□□□□□ -0.84
ATG4D-211ENST00000589753 GCSHP23434 173 aa9.8□□□□□ -0.84
ATG4D-211ENST00000589753 MYMXA0A1B0GTQ4 84 aa9.79□□□□□ -0.84
ATG4D-211ENST00000589753 C16orf90A8MZG2 172 aa9.79□□□□□ -0.84
ATG4D-211ENST00000589753 NMUP48645 174 aa9.79□□□□□ -0.84
ATG4D-211ENST00000589753 C9orf116Q5BN46 136 aaPredicted RBP9.78□□□□□ -0.84
ATG4D-211ENST00000589753 PKIGQ9Y2B9 76 aa9.78□□□□□ -0.84
ATG4D-211ENST00000589753 LOC107984640A0A0U1RRK4 108 aa9.77□□□□□ -0.85
ATG4D-211ENST00000589753 LOC105371267A0A1B0GV96 52 aa9.77□□□□□ -0.85
ATG4D-211ENST00000589753 HERV-K104P63124 156 aa9.77□□□□□ -0.85
ATG4D-211ENST00000589753 SDIM1Q6ZPB5 146 aa9.77□□□□□ -0.85
ATG4D-211ENST00000589753 VAMP8Q9BV40 100 aa9.76□□□□□ -0.85
ATG4D-211ENST00000589753 BIRC6Q9NR09 4857 aa9.75□□□□□ -0.85
ATG4D-211ENST00000589753 ZNF815PA8K554 130 aa9.75□□□□□ -0.85
ATG4D-211ENST00000589753 TLX1NBP0CAT3 122 aa9.75□□□□□ -0.85
ATG4D-211ENST00000589753 KRTAP10-1P60331 282 aa9.75□□□□□ -0.85
ATG4D-211ENST00000589753 RPL18AQ02543 176 aaKnown RBP9.75□□□□□ -0.85
ATG4D-211ENST00000589753 TTTY13Q9BZ97 58 aa9.75□□□□□ -0.85
ATG4D-211ENST00000589753 ERG28Q9UKR5 140 aa9.75□□□□□ -0.85
ATG4D-211ENST00000589753 PKD1P98161 4303 aa9.75□□□□□ -0.85
ATG4D-211ENST00000589753 NDUFC2-KCTD14E9PQ53 114 aa9.74□□□□□ -0.85
ATG4D-211ENST00000589753 PFN2P35080 140 aa9.74□□□□□ -0.85
ATG4D-211ENST00000589753 MEIG1Q5JSS6 88 aa9.74□□□□□ -0.85
ATG4D-211ENST00000589753 PAM16Q9Y3D7 125 aa9.74□□□□□ -0.85
ATG4D-211ENST00000589753 LINC00587B1AMM8 73 aa9.73□□□□□ -0.85
ATG4D-211ENST00000589753 GAGE2BQ13066 116 aa9.73□□□□□ -0.85
ATG4D-211ENST00000589753 COX17Q14061 63 aa9.73□□□□□ -0.85
ATG4D-211ENST00000589753 SPATA45Q537H7 98 aa9.73□□□□□ -0.85
ATG4D-211ENST00000589753 PCP2Q8IVA1 136 aa9.73□□□□□ -0.85
ATG4D-211ENST00000589753 DNAH11Q96DT5 4516 aa9.73□□□□□ -0.85
ATG4D-211ENST00000589753 EPPK1P58107 5090 aaKnown RBP9.73□□□□□ -0.85
ATG4D-211ENST00000589753 A0A096LNI7 61 aa9.72□□□□□ -0.85
ATG4D-211ENST00000589753 Q6ZRP5 223 aa9.72□□□□□ -0.85
ATG4D-211ENST00000589753 IGKV2-24A0A0C4DH68 120 aa9.71□□□□□ -0.86
ATG4D-211ENST00000589753 A0A0J9YXY3 114 aa9.71□□□□□ -0.86
ATG4D-211ENST00000589753 SMIM13P0DJ93 91 aa9.71□□□□□ -0.86
ATG4D-211ENST00000589753 PTTG1IPP53801 180 aa9.71□□□□□ -0.86
ATG4D-211ENST00000589753 LINC00158P58513 81 aa9.71□□□□□ -0.86
ATG4D-211ENST00000589753 GAGE2EQ4V326 116 aa9.71□□□□□ -0.86
ATG4D-211ENST00000589753 GAGE2DQ9UEU5 116 aa9.71□□□□□ -0.86
ATG4D-211ENST00000589753 A0A0U1RRA0 63 aa9.7□□□□□ -0.86
ATG4D-211ENST00000589753 CHTF8P0CG12 524 aa9.7□□□□□ -0.86
ATG4D-211ENST00000589753 LINC00474Q9P2X8 69 aa9.7□□□□□ -0.86
ATG4D-211ENST00000589753 SMIM6P0DI80 62 aa9.69□□□□□ -0.86
ATG4D-211ENST00000589753 S100A12P80511 92 aa9.69□□□□□ -0.86
ATG4D-211ENST00000589753 CIRBPQ14011 172 aaKnown RBP9.69□□□□□ -0.86
ATG4D-211ENST00000589753 SCGB1D4Q6XE38 83 aa9.69□□□□□ -0.86
ATG4D-211ENST00000589753 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.69□□□□□ -0.86
ATG4D-211ENST00000589753 HECTD4Q9Y4D8 3996 aa9.68□□□□□ -0.86
ATG4D-211ENST00000589753 PANO1I0J062 215 aa9.68□□□□□ -0.86
ATG4D-211ENST00000589753 COX8AP10176 69 aa9.68□□□□□ -0.86
ATG4D-211ENST00000589753 Q6ZSA8 131 aa9.68□□□□□ -0.86
ATG4D-211ENST00000589753 SPACA4Q8TDM5 124 aa9.68□□□□□ -0.86
ATG4D-211ENST00000589753 FAM30AQ9NZY2 134 aa9.68□□□□□ -0.86
ATG4D-211ENST00000589753 BOD1L2Q8IYS8 172 aa9.67□□□□□ -0.86
ATG4D-211ENST00000589753 DPH3Q96FX2 82 aa9.67□□□□□ -0.86
ATG4D-211ENST00000589753 XAGE1AQ9HD64 81 aa9.67□□□□□ -0.86
ATG4D-211ENST00000589753 TIMM17BO60830 172 aa9.66□□□□□ -0.86
ATG4D-211ENST00000589753 MIR7-3HGQ8N6C7 128 aa9.66□□□□□ -0.86
ATG4D-211ENST00000589753 C14orf144Q96I85 54 aa9.66□□□□□ -0.86
ATG4D-211ENST00000589753 C9orf129Q5T035 196 aaKnown RBP9.65□□□□□ -0.86
ATG4D-211ENST00000589753 SND1-IT1Q9HBX3 110 aa9.65□□□□□ -0.86
ATG4D-211ENST00000589753 TMEM238C9JI98 176 aa9.64□□□□□ -0.87
ATG4D-211ENST00000589753 DLEU1O43261 78 aa9.64□□□□□ -0.87
ATG4D-211ENST00000589753 ADAMTSL4-AS1Q5T5F5 129 aa9.64□□□□□ -0.87
ATG4D-211ENST00000589753 DAND5Q8N907 189 aa9.64□□□□□ -0.87
ATG4D-211ENST00000589753 LITAFQ99732 161 aa9.64□□□□□ -0.87
ATG4D-211ENST00000589753 TP73-AS1Q9UF72 201 aa9.64□□□□□ -0.87
ATG4D-211ENST00000589753 SLC25A34Q6PIV7 304 aa9.63□□□□□ -0.87
ATG4D-211ENST00000589753 DNAH5Q8TE73 4624 aa9.63□□□□□ -0.87
ATG4D-211ENST00000589753 A0A087WYN8 130 aa9.62□□□□□ -0.87
ATG4D-211ENST00000589753 A0A1W2PNN7 141 aa9.61□□□□□ -0.87
ATG4D-211ENST00000589753 FAM168BA1KXE4 195 aa9.61□□□□□ -0.87
ATG4D-211ENST00000589753 SCXQ7RTU7 201 aa9.61□□□□□ -0.87
ATG4D-211ENST00000589753 CIRBP-AS1Q8TBR5 109 aa9.61□□□□□ -0.87
ATG4D-211ENST00000589753 HAMPP81172 84 aa9.6□□□□□ -0.87
ATG4D-211ENST00000589753 FAM19A5Q7Z5A7 132 aaPredicted RBP9.6□□□□□ -0.87
ATG4D-211ENST00000589753 MIEN1Q9BRT3 115 aa9.6□□□□□ -0.87
ATG4D-211ENST00000589753 SPANXDQ9BXN6 97 aa9.6□□□□□ -0.87
ATG4D-211ENST00000589753 SPANXCQ9NY87 97 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 155.3 ms