RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 Q6ZRU5 148 aa7.88□□□□□ -1.15
DNMT1-218ENST00000589294 CARD19Q96LW7 228 aa7.88□□□□□ -1.15
DNMT1-218ENST00000589294 TRBV30A0A0K0K1B3 111 aa7.87□□□□□ -1.15
DNMT1-218ENST00000589294 LEPROTO15243 131 aa7.87□□□□□ -1.15
DNMT1-218ENST00000589294 SCGB1D1O95968 90 aa7.87□□□□□ -1.15
DNMT1-218ENST00000589294 FUSP35637 526 aaKnown RBP eCLIP7.87□□□□□ -1.15
DNMT1-218ENST00000589294 PLEKHB2Q96CS7 222 aa7.87□□□□□ -1.15
DNMT1-218ENST00000589294 PKIGQ9Y2B9 76 aa7.87□□□□□ -1.15
DNMT1-218ENST00000589294 PKHD1P08F94 4074 aa7.87□□□□□ -1.15
DNMT1-218ENST00000589294 C16orf90A8MZG2 172 aa7.86□□□□□ -1.15
DNMT1-218ENST00000589294 E9PLD3 99 aa7.86□□□□□ -1.15
DNMT1-218ENST00000589294 C10orf25Q5T742 122 aa7.86□□□□□ -1.15
DNMT1-218ENST00000589294 C2orf82Q6UX34 121 aa7.86□□□□□ -1.15
DNMT1-218ENST00000589294 SDIM1Q6ZPB5 146 aa7.86□□□□□ -1.15
DNMT1-218ENST00000589294 STPG4Q8N801 248 aa7.86□□□□□ -1.15
DNMT1-218ENST00000589294 DNAH5Q8TE73 4624 aa7.85□□□□□ -1.15
DNMT1-218ENST00000589294 J3QQQ9 107 aa7.84□□□□□ -1.15
DNMT1-218ENST00000589294 JOSD1Q15040 202 aaPredicted RBP7.84□□□□□ -1.15
DNMT1-218ENST00000589294 ZNF625Q96I27 306 aaPredicted RBP7.84□□□□□ -1.15
DNMT1-218ENST00000589294 C6orf48Q9UBA6 75 aa7.84□□□□□ -1.15
DNMT1-218ENST00000589294 LOC107984640A0A0U1RRK4 108 aa7.83□□□□□ -1.16
DNMT1-218ENST00000589294 TLX1NBP0CAT3 122 aa7.83□□□□□ -1.16
DNMT1-218ENST00000589294 NMUP48645 174 aa7.83□□□□□ -1.16
DNMT1-218ENST00000589294 LINC01620Q4KN68 170 aa7.83□□□□□ -1.16
DNMT1-218ENST00000589294 ATOH7Q8N100 152 aa7.83□□□□□ -1.16
DNMT1-218ENST00000589294 MYMXA0A1B0GTQ4 84 aa7.82□□□□□ -1.16
DNMT1-218ENST00000589294 HSBP1L1C9JCN9 74 aa7.82□□□□□ -1.16
DNMT1-218ENST00000589294 LGALS3P17931 250 aaKnown RBP7.82□□□□□ -1.16
DNMT1-218ENST00000589294 KRTAP10-1P60331 282 aa7.82□□□□□ -1.16
DNMT1-218ENST00000589294 HERV-K104P63124 156 aa7.82□□□□□ -1.16
DNMT1-218ENST00000589294 NDUFA12Q9UI09 145 aa7.82□□□□□ -1.16
DNMT1-218ENST00000589294 EPPK1P58107 5090 aaKnown RBP7.81□□□□□ -1.16
DNMT1-218ENST00000589294 LINC00587B1AMM8 73 aa7.81□□□□□ -1.16
DNMT1-218ENST00000589294 COX17Q14061 63 aa7.81□□□□□ -1.16
DNMT1-218ENST00000589294 LINC00474Q9P2X8 69 aa7.81□□□□□ -1.16
DNMT1-218ENST00000589294 DYNC1H1Q14204 4646 aaKnown RBP7.8□□□□□ -1.16
DNMT1-218ENST00000589294 NDUFC2-KCTD14E9PQ53 114 aa7.8□□□□□ -1.16
DNMT1-218ENST00000589294 TSPEAR-AS2P59090 65 aa7.8□□□□□ -1.16
DNMT1-218ENST00000589294 C9orf116Q5BN46 136 aaPredicted RBP7.8□□□□□ -1.16
DNMT1-218ENST00000589294 IGKV2D-26A0A0A0MRZ7 120 aa7.79□□□□□ -1.16
DNMT1-218ENST00000589294 ANKRD39Q53RE8 183 aa7.79□□□□□ -1.16
DNMT1-218ENST00000589294 Q6ZSA8 131 aa7.79□□□□□ -1.16
DNMT1-218ENST00000589294 ERG28Q9UKR5 140 aa7.79□□□□□ -1.16
DNMT1-218ENST00000589294 LRP1BQ9NZR2 4599 aa7.78□□□□□ -1.16
DNMT1-218ENST00000589294 PTTG1IPP53801 180 aa7.78□□□□□ -1.16
DNMT1-218ENST00000589294 CIRBPQ14011 172 aaKnown RBP7.78□□□□□ -1.16
DNMT1-218ENST00000589294 Q6ZRP5 223 aa7.78□□□□□ -1.16
DNMT1-218ENST00000589294 DNAH8Q96JB1 4490 aa7.78□□□□□ -1.16
DNMT1-218ENST00000589294 GAGE2BQ13066 116 aa7.77□□□□□ -1.17
DNMT1-218ENST00000589294 MAJINQ3KP22 176 aa7.77□□□□□ -1.17
DNMT1-218ENST00000589294 PYY3Q5JQD4 70 aa7.77□□□□□ -1.17
DNMT1-218ENST00000589294 DPH3Q96FX2 82 aa7.77□□□□□ -1.17
DNMT1-218ENST00000589294 A0A096LNI7 61 aa7.76□□□□□ -1.17
DNMT1-218ENST00000589294 PFN2P35080 140 aa7.76□□□□□ -1.17
DNMT1-218ENST00000589294 RPL18AQ02543 176 aaKnown RBP7.76□□□□□ -1.17
DNMT1-218ENST00000589294 FAM30AQ9NZY2 134 aa7.76□□□□□ -1.17
DNMT1-218ENST00000589294 IGKV2-24A0A0C4DH68 120 aa7.75□□□□□ -1.17
DNMT1-218ENST00000589294 ZNF815PA8K554 130 aa7.75□□□□□ -1.17
DNMT1-218ENST00000589294 LINC00158P58513 81 aa7.75□□□□□ -1.17
DNMT1-218ENST00000589294 GAGE2EQ4V326 116 aa7.75□□□□□ -1.17
DNMT1-218ENST00000589294 MEIG1Q5JSS6 88 aa7.75□□□□□ -1.17
DNMT1-218ENST00000589294 SPACA4Q8TDM5 124 aa7.75□□□□□ -1.17
DNMT1-218ENST00000589294 GAGE2DQ9UEU5 116 aa7.75□□□□□ -1.17
DNMT1-218ENST00000589294 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.75□□□□□ -1.17
DNMT1-218ENST00000589294 A0A0J9YXY3 114 aa7.74□□□□□ -1.17
DNMT1-218ENST00000589294 CHTF8P0CG12 524 aa7.74□□□□□ -1.17
DNMT1-218ENST00000589294 SMIM13P0DJ93 91 aa7.74□□□□□ -1.17
DNMT1-218ENST00000589294 VAMP8Q9BV40 100 aa7.74□□□□□ -1.17
DNMT1-218ENST00000589294 PANO1I0J062 215 aa7.73□□□□□ -1.17
DNMT1-218ENST00000589294 TIMM17BO60830 172 aa7.73□□□□□ -1.17
DNMT1-218ENST00000589294 CDK2AP2O75956 126 aa7.73□□□□□ -1.17
DNMT1-218ENST00000589294 PCP2Q8IVA1 136 aa7.73□□□□□ -1.17
DNMT1-218ENST00000589294 TTTY13Q9BZ97 58 aa7.73□□□□□ -1.17
DNMT1-218ENST00000589294 LOC105371267A0A1B0GV96 52 aa7.72□□□□□ -1.17
DNMT1-218ENST00000589294 EPM2AB3EWF7 344 aa7.72□□□□□ -1.17
DNMT1-218ENST00000589294 XGP55808 180 aa7.72□□□□□ -1.17
DNMT1-218ENST00000589294 SND1-IT1Q9HBX3 110 aa7.72□□□□□ -1.17
DNMT1-218ENST00000589294 PLAC8Q9NZF1 115 aa7.72□□□□□ -1.17
DNMT1-218ENST00000589294 PAM16Q9Y3D7 125 aa7.72□□□□□ -1.17
DNMT1-218ENST00000589294 A0A087WYN8 130 aa7.71□□□□□ -1.18
DNMT1-218ENST00000589294 A0A0U1RRA0 63 aa7.71□□□□□ -1.18
DNMT1-218ENST00000589294 DLEU1O43261 78 aa7.71□□□□□ -1.18
DNMT1-218ENST00000589294 COX8AP10176 69 aa7.71□□□□□ -1.18
DNMT1-218ENST00000589294 SPATA45Q537H7 98 aa7.71□□□□□ -1.18
DNMT1-218ENST00000589294 C9orf129Q5T035 196 aaKnown RBP7.71□□□□□ -1.18
DNMT1-218ENST00000589294 CIRBP-AS1Q8TBR5 109 aa7.71□□□□□ -1.18
DNMT1-218ENST00000589294 XAGE1AQ9HD64 81 aa7.71□□□□□ -1.18
DNMT1-218ENST00000589294 S100A12P80511 92 aa7.7□□□□□ -1.18
DNMT1-218ENST00000589294 SCGB1D4Q6XE38 83 aa7.7□□□□□ -1.18
DNMT1-218ENST00000589294 SCXQ7RTU7 201 aa7.7□□□□□ -1.18
DNMT1-218ENST00000589294 BOD1L2Q8IYS8 172 aa7.7□□□□□ -1.18
DNMT1-218ENST00000589294 MIR7-3HGQ8N6C7 128 aa7.7□□□□□ -1.18
DNMT1-218ENST00000589294 PLA2G2DQ9UNK4 145 aa7.7□□□□□ -1.18
DNMT1-218ENST00000589294 LOC107984156A0A0G2JMH3 177 aa7.69□□□□□ -1.18
DNMT1-218ENST00000589294 A0A1W2PNN7 141 aa7.69□□□□□ -1.18
DNMT1-218ENST00000589294 ADAMTSL4-AS1Q5T5F5 129 aa7.69□□□□□ -1.18
DNMT1-218ENST00000589294 ARL17AQ8IVW1 177 aa7.69□□□□□ -1.18
DNMT1-218ENST00000589294 SMIM6P0DI80 62 aa7.68□□□□□ -1.18
DNMT1-218ENST00000589294 Q6ZVH6 145 aa7.68□□□□□ -1.18
DNMT1-218ENST00000589294 LITAFQ99732 161 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms