RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 SNRPEP62304 92 aaKnown RBP12.64□□□□□ -0.39
CIRBP-220ENST00000588917 COX7B2Q8TF08 81 aa12.64□□□□□ -0.39
CIRBP-220ENST00000588917 IGLV5-39A0A0G2JS06 123 aa12.63□□□□□ -0.39
CIRBP-220ENST00000588917 IGKCP01834 107 aa12.63□□□□□ -0.39
CIRBP-220ENST00000588917 C3orf79P0CE67 100 aa12.63□□□□□ -0.39
CIRBP-220ENST00000588917 AKR1D1P51857 326 aa12.63□□□□□ -0.39
CIRBP-220ENST00000588917 SDIM1Q6ZPB5 146 aa12.63□□□□□ -0.39
CIRBP-220ENST00000588917 Q6ZRU5 148 aa12.63□□□□□ -0.39
CIRBP-220ENST00000588917 KRTDAPP60985 99 aa12.62□□□□□ -0.39
CIRBP-220ENST00000588917 LINC01620Q4KN68 170 aa12.62□□□□□ -0.39
CIRBP-220ENST00000588917 HSPG2P98160 4391 aa12.61□□□□□ -0.39
CIRBP-220ENST00000588917 TRBV30A0A0K0K1B3 111 aa12.61□□□□□ -0.39
CIRBP-220ENST00000588917 TMEM223A0PJW6 202 aa12.61□□□□□ -0.39
CIRBP-220ENST00000588917 C20orf202A1L168 122 aa12.61□□□□□ -0.39
CIRBP-220ENST00000588917 C5orf52A6NGY3 159 aa12.61□□□□□ -0.39
CIRBP-220ENST00000588917 LINC01545Q5VT33 79 aa12.61□□□□□ -0.39
CIRBP-220ENST00000588917 UNQ6190/PRO20217Q6UXQ8 127 aa12.61□□□□□ -0.39
CIRBP-220ENST00000588917 SFTA2Q6UW10 78 aa12.6□□□□□ -0.39
CIRBP-220ENST00000588917 HIST1H2BLQ99880 126 aa12.6□□□□□ -0.39
CIRBP-220ENST00000588917 DNAH5Q8TE73 4624 aa12.59□□□□□ -0.39
CIRBP-220ENST00000588917 LOC107984640A0A0U1RRK4 108 aa12.59□□□□□ -0.39
CIRBP-220ENST00000588917 HERVK_113P61574 105 aa12.59□□□□□ -0.39
CIRBP-220ENST00000588917 C2orf82Q6UX34 121 aa12.59□□□□□ -0.39
CIRBP-220ENST00000588917 PMCHL2Q9BQD1 86 aa12.59□□□□□ -0.39
CIRBP-220ENST00000588917 LINC00474Q9P2X8 69 aa12.58□□□□□ -0.4
CIRBP-220ENST00000588917 C10orf25Q5T742 122 aa12.57□□□□□ -0.4
CIRBP-220ENST00000588917 LRP1BQ9NZR2 4599 aa12.56□□□□□ -0.4
CIRBP-220ENST00000588917 Q6ZSA8 131 aa12.56□□□□□ -0.4
CIRBP-220ENST00000588917 DPH3Q96FX2 82 aa12.56□□□□□ -0.4
CIRBP-220ENST00000588917 C6orf48Q9UBA6 75 aa12.56□□□□□ -0.4
CIRBP-220ENST00000588917 TLX1NBP0CAT3 122 aa12.55□□□□□ -0.4
CIRBP-220ENST00000588917 Q8N1X5 172 aa12.54□□□□□ -0.4
CIRBP-220ENST00000588917 PLEKHB2Q96CS7 222 aa12.54□□□□□ -0.4
CIRBP-220ENST00000588917 FAM30AQ9NZY2 134 aa12.53□□□□□ -0.4
CIRBP-220ENST00000588917 NDUFC2-KCTD14E9PQ53 114 aa12.52□□□□□ -0.41
CIRBP-220ENST00000588917 LEPROTO15243 131 aa12.52□□□□□ -0.41
CIRBP-220ENST00000588917 RPL18AQ02543 176 aaKnown RBP12.51□□□□□ -0.41
CIRBP-220ENST00000588917 GAGE2BQ13066 116 aa12.51□□□□□ -0.41
CIRBP-220ENST00000588917 CIRBPQ14011 172 aaKnown RBP12.51□□□□□ -0.41
CIRBP-220ENST00000588917 PTTG1IPP53801 180 aa12.5□□□□□ -0.41
CIRBP-220ENST00000588917 A0A096LNI7 61 aa12.49□□□□□ -0.41
CIRBP-220ENST00000588917 IGKV2-24A0A0C4DH68 120 aa12.49□□□□□ -0.41
CIRBP-220ENST00000588917 E9PLD3 99 aa12.49□□□□□ -0.41
CIRBP-220ENST00000588917 XGP55808 180 aa12.49□□□□□ -0.41
CIRBP-220ENST00000588917 HERV-K104P63124 156 aa12.49□□□□□ -0.41
CIRBP-220ENST00000588917 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.49□□□□□ -0.41
CIRBP-220ENST00000588917 MYMXA0A1B0GTQ4 84 aa12.48□□□□□ -0.41
CIRBP-220ENST00000588917 LINC00587B1AMM8 73 aa12.48□□□□□ -0.41
CIRBP-220ENST00000588917 J3QQQ9 107 aa12.48□□□□□ -0.41
CIRBP-220ENST00000588917 COX17Q14061 63 aa12.48□□□□□ -0.41
CIRBP-220ENST00000588917 MAJINQ3KP22 176 aa12.48□□□□□ -0.41
CIRBP-220ENST00000588917 C9orf116Q5BN46 136 aaPredicted RBP12.48□□□□□ -0.41
CIRBP-220ENST00000588917 SPACA4Q8TDM5 124 aa12.48□□□□□ -0.41
CIRBP-220ENST00000588917 LGALS3P17931 250 aaKnown RBP12.47□□□□□ -0.41
CIRBP-220ENST00000588917 NMUP48645 174 aa12.47□□□□□ -0.41
CIRBP-220ENST00000588917 Q6ZRP5 223 aa12.47□□□□□ -0.41
CIRBP-220ENST00000588917 ZNF625Q96I27 306 aaPredicted RBP12.47□□□□□ -0.41
CIRBP-220ENST00000588917 TMA7Q9Y2S6 64 aaKnown RBP12.47□□□□□ -0.41
CIRBP-220ENST00000588917 APOBP04114 4563 aaKnown RBP12.46□□□□□ -0.41
CIRBP-220ENST00000588917 CHTF8P0CG12 524 aa12.46□□□□□ -0.41
CIRBP-220ENST00000588917 CIRBP-AS1Q8TBR5 109 aa12.46□□□□□ -0.41
CIRBP-220ENST00000588917 NDUFA12Q9UI09 145 aa12.46□□□□□ -0.41
CIRBP-220ENST00000588917 DNAH8Q96JB1 4490 aa12.45□□□□□ -0.42
CIRBP-220ENST00000588917 GAGE2EQ4V326 116 aa12.45□□□□□ -0.42
CIRBP-220ENST00000588917 SCXQ7RTU7 201 aa12.45□□□□□ -0.42
CIRBP-220ENST00000588917 STPG4Q8N801 248 aa12.45□□□□□ -0.42
CIRBP-220ENST00000588917 GAGE2DQ9UEU5 116 aa12.45□□□□□ -0.42
CIRBP-220ENST00000588917 A0A087WYN8 130 aa12.44□□□□□ -0.42
CIRBP-220ENST00000588917 PANO1I0J062 215 aa12.44□□□□□ -0.42
CIRBP-220ENST00000588917 ERG28Q9UKR5 140 aa12.44□□□□□ -0.42
CIRBP-220ENST00000588917 SCGB1D1O95968 90 aa12.43□□□□□ -0.42
CIRBP-220ENST00000588917 PLAC8Q9NZF1 115 aa12.43□□□□□ -0.42
CIRBP-220ENST00000588917 PFN2P35080 140 aa12.42□□□□□ -0.42
CIRBP-220ENST00000588917 HSBP1L1C9JCN9 74 aa12.41□□□□□ -0.42
CIRBP-220ENST00000588917 ATOH7Q8N100 152 aa12.41□□□□□ -0.42
CIRBP-220ENST00000588917 MEIG1Q5JSS6 88 aa12.4□□□□□ -0.42
CIRBP-220ENST00000588917 LINC00158P58513 81 aa12.39□□□□□ -0.43
CIRBP-220ENST00000588917 TSPEAR-AS2P59090 65 aa12.39□□□□□ -0.43
CIRBP-220ENST00000588917 HAMPP81172 84 aa12.38□□□□□ -0.43
CIRBP-220ENST00000588917 EPM2AB3EWF7 344 aa12.37□□□□□ -0.43
CIRBP-220ENST00000588917 FAM229AH3BQW9 127 aa12.36□□□□□ -0.43
CIRBP-220ENST00000588917 C9orf129Q5T035 196 aaKnown RBP12.36□□□□□ -0.43
CIRBP-220ENST00000588917 XAGE1AQ9HD64 81 aa12.36□□□□□ -0.43
CIRBP-220ENST00000588917 SMIM13P0DJ93 91 aa12.35□□□□□ -0.43
CIRBP-220ENST00000588917 IGKV2D-26A0A0A0MRZ7 120 aa12.34□□□□□ -0.43
CIRBP-220ENST00000588917 A0A1W2PNN7 141 aa12.34□□□□□ -0.43
CIRBP-220ENST00000588917 SMR3BP02814 79 aaPredicted RBP12.34□□□□□ -0.43
CIRBP-220ENST00000588917 JOSD1Q15040 202 aaPredicted RBP12.34□□□□□ -0.43
CIRBP-220ENST00000588917 ANKRD39Q53RE8 183 aa12.34□□□□□ -0.43
CIRBP-220ENST00000588917 C7orf33Q8WU49 177 aa12.34□□□□□ -0.43
CIRBP-220ENST00000588917 SND1-IT1Q9HBX3 110 aa12.33□□□□□ -0.44
CIRBP-220ENST00000588917 PLA2G2DQ9UNK4 145 aa12.33□□□□□ -0.44
CIRBP-220ENST00000588917 A0A0J9YXY3 114 aa12.32□□□□□ -0.44
CIRBP-220ENST00000588917 A0A0U1RRA0 63 aa12.32□□□□□ -0.44
CIRBP-220ENST00000588917 ZNF815PA8K554 130 aa12.32□□□□□ -0.44
CIRBP-220ENST00000588917 HERC1Q15751 4861 aa12.31□□□□□ -0.44
CIRBP-220ENST00000588917 FAM168BA1KXE4 195 aa12.3□□□□□ -0.44
CIRBP-220ENST00000588917 RPL24P83731 157 aaKnown RBP12.3□□□□□ -0.44
CIRBP-220ENST00000588917 FAM19A5Q7Z5A7 132 aaPredicted RBP12.3□□□□□ -0.44
CIRBP-220ENST00000588917 LINC00528Q8N1L1 170 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms