RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 SYS1-DBNDD2H3BUS1 97 aa12.29□□□□□ -0.44
DDX39A-204ENST00000586558 C2orf82Q6UX34 121 aa12.29□□□□□ -0.44
DDX39A-204ENST00000586558 LOC107984640A0A0U1RRK4 108 aa12.28□□□□□ -0.44
DDX39A-204ENST00000586558 DPM2O94777 84 aa12.28□□□□□ -0.44
DDX39A-204ENST00000586558 C10orf25Q5T742 122 aa12.28□□□□□ -0.44
DDX39A-204ENST00000586558 XGP55808 180 aa12.27□□□□□ -0.45
DDX39A-204ENST00000586558 CIRBPQ14011 172 aaKnown RBP12.27□□□□□ -0.45
DDX39A-204ENST00000586558 PET117Q6UWS5 81 aa12.27□□□□□ -0.45
DDX39A-204ENST00000586558 LINC00474Q9P2X8 69 aa12.27□□□□□ -0.45
DDX39A-204ENST00000586558 C6orf48Q9UBA6 75 aa12.27□□□□□ -0.45
DDX39A-204ENST00000586558 TMEM223A0PJW6 202 aa12.26□□□□□ -0.45
DDX39A-204ENST00000586558 HIST3H2BBQ8N257 126 aa12.26□□□□□ -0.45
DDX39A-204ENST00000586558 IGKCP01834 107 aa12.25□□□□□ -0.45
DDX39A-204ENST00000586558 S100A2P29034 98 aa12.25□□□□□ -0.45
DDX39A-204ENST00000586558 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.25□□□□□ -0.45
DDX39A-204ENST00000586558 KIAA1109Q2LD37 5005 aa12.25□□□□□ -0.45
DDX39A-204ENST00000586558 TLX1NBP0CAT3 122 aa12.24□□□□□ -0.45
DDX39A-204ENST00000586558 C3orf79P0CE67 100 aa12.24□□□□□ -0.45
DDX39A-204ENST00000586558 LINC01545Q5VT33 79 aa12.24□□□□□ -0.45
DDX39A-204ENST00000586558 SFTA2Q6UW10 78 aa12.24□□□□□ -0.45
DDX39A-204ENST00000586558 SPACA4Q8TDM5 124 aa12.24□□□□□ -0.45
DDX39A-204ENST00000586558 PMCHL2Q9BQD1 86 aa12.24□□□□□ -0.45
DDX39A-204ENST00000586558 A0A096LNI7 61 aa12.23□□□□□ -0.45
DDX39A-204ENST00000586558 KRTDAPP60985 99 aa12.23□□□□□ -0.45
DDX39A-204ENST00000586558 SCXQ7RTU7 201 aa12.23□□□□□ -0.45
DDX39A-204ENST00000586558 IGKV2-24A0A0C4DH68 120 aa12.22□□□□□ -0.45
DDX39A-204ENST00000586558 PANO1I0J062 215 aa12.22□□□□□ -0.45
DDX39A-204ENST00000586558 CHTF8P0CG12 524 aa12.22□□□□□ -0.45
DDX39A-204ENST00000586558 PTTG1IPP53801 180 aa12.22□□□□□ -0.45
DDX39A-204ENST00000586558 HERVK_113P61574 105 aa12.21□□□□□ -0.45
DDX39A-204ENST00000586558 RPL18AQ02543 176 aaKnown RBP12.21□□□□□ -0.45
DDX39A-204ENST00000586558 HIST1H2BLQ99880 126 aa12.21□□□□□ -0.45
DDX39A-204ENST00000586558 C20orf202A1L168 122 aa12.2□□□□□ -0.46
DDX39A-204ENST00000586558 NDUFC2-KCTD14E9PQ53 114 aa12.2□□□□□ -0.46
DDX39A-204ENST00000586558 HAMPP81172 84 aa12.2□□□□□ -0.46
DDX39A-204ENST00000586558 GAGE2BQ13066 116 aa12.2□□□□□ -0.46
DDX39A-204ENST00000586558 CIRBP-AS1Q8TBR5 109 aa12.2□□□□□ -0.46
DDX39A-204ENST00000586558 DPH3Q96FX2 82 aa12.2□□□□□ -0.46
DDX39A-204ENST00000586558 SNRPEP62304 92 aaKnown RBP12.19□□□□□ -0.46
DDX39A-204ENST00000586558 MAJINQ3KP22 176 aa12.19□□□□□ -0.46
DDX39A-204ENST00000586558 APOBP04114 4563 aaKnown RBP12.18□□□□□ -0.46
DDX39A-204ENST00000586558 C5orf52A6NGY3 159 aa12.18□□□□□ -0.46
DDX39A-204ENST00000586558 AKR1D1P51857 326 aa12.18□□□□□ -0.46
DDX39A-204ENST00000586558 C9orf116Q5BN46 136 aaPredicted RBP12.18□□□□□ -0.46
DDX39A-204ENST00000586558 PLAC8Q9NZF1 115 aa12.18□□□□□ -0.46
DDX39A-204ENST00000586558 Q6ZRP5 223 aa12.17□□□□□ -0.46
DDX39A-204ENST00000586558 PLEKHB2Q96CS7 222 aa12.17□□□□□ -0.46
DDX39A-204ENST00000586558 ZNF625Q96I27 306 aaPredicted RBP12.17□□□□□ -0.46
DDX39A-204ENST00000586558 A0A087WYN8 130 aa12.16□□□□□ -0.46
DDX39A-204ENST00000586558 LEPROTO15243 131 aa12.16□□□□□ -0.46
DDX39A-204ENST00000586558 DNAH8Q96JB1 4490 aa12.15□□□□□ -0.46
DDX39A-204ENST00000586558 STPG4Q8N801 248 aa12.15□□□□□ -0.46
DDX39A-204ENST00000586558 PCLOQ9Y6V0 5065 aa12.14□□□□□ -0.47
DDX39A-204ENST00000586558 RYR1P21817 5038 aa12.14□□□□□ -0.47
DDX39A-204ENST00000586558 GAGE2EQ4V326 116 aa12.13□□□□□ -0.47
DDX39A-204ENST00000586558 Q8N1X5 172 aa12.13□□□□□ -0.47
DDX39A-204ENST00000586558 GAGE2DQ9UEU5 116 aa12.13□□□□□ -0.47
DDX39A-204ENST00000586558 E9PLD3 99 aa12.12□□□□□ -0.47
DDX39A-204ENST00000586558 J3QQQ9 107 aa12.12□□□□□ -0.47
DDX39A-204ENST00000586558 HERV-K104P63124 156 aa12.12□□□□□ -0.47
DDX39A-204ENST00000586558 COX17Q14061 63 aa12.12□□□□□ -0.47
DDX39A-204ENST00000586558 NDUFA12Q9UI09 145 aa12.12□□□□□ -0.47
DDX39A-204ENST00000586558 ERG28Q9UKR5 140 aa12.12□□□□□ -0.47
DDX39A-204ENST00000586558 NMUP48645 174 aa12.11□□□□□ -0.47
DDX39A-204ENST00000586558 HSPG2P98160 4391 aa12.11□□□□□ -0.47
DDX39A-204ENST00000586558 MYMXA0A1B0GTQ4 84 aa12.1□□□□□ -0.47
DDX39A-204ENST00000586558 EPM2AB3EWF7 344 aa12.1□□□□□ -0.47
DDX39A-204ENST00000586558 SMR3BP02814 79 aaPredicted RBP12.1□□□□□ -0.47
DDX39A-204ENST00000586558 TSPEAR-AS2P59090 65 aa12.1□□□□□ -0.47
DDX39A-204ENST00000586558 FAM229AH3BQW9 127 aa12.09□□□□□ -0.47
DDX39A-204ENST00000586558 LGALS3P17931 250 aaKnown RBP12.09□□□□□ -0.47
DDX39A-204ENST00000586558 LINC00587B1AMM8 73 aa12.08□□□□□ -0.48
DDX39A-204ENST00000586558 PFN2P35080 140 aa12.08□□□□□ -0.48
DDX39A-204ENST00000586558 LINC00528Q8N1L1 170 aa12.08□□□□□ -0.48
DDX39A-204ENST00000586558 A0A1W2PNN7 141 aa12.07□□□□□ -0.48
DDX39A-204ENST00000586558 C9orf129Q5T035 196 aaKnown RBP12.07□□□□□ -0.48
DDX39A-204ENST00000586558 XAGE1AQ9HD64 81 aa12.06□□□□□ -0.48
DDX39A-204ENST00000586558 C7orf33Q8WU49 177 aa12.05□□□□□ -0.48
DDX39A-204ENST00000586558 MEIG1Q5JSS6 88 aa12.04□□□□□ -0.48
DDX39A-204ENST00000586558 Q5VSD8 79 aa12.04□□□□□ -0.48
DDX39A-204ENST00000586558 ATOH7Q8N100 152 aa12.04□□□□□ -0.48
DDX39A-204ENST00000586558 KRTAP17-1Q9BYP8 105 aa12.04□□□□□ -0.48
DDX39A-204ENST00000586558 TMA7Q9Y2S6 64 aaKnown RBP12.04□□□□□ -0.48
DDX39A-204ENST00000586558 LINC00158P58513 81 aa12.03□□□□□ -0.48
DDX39A-204ENST00000586558 FAM168BA1KXE4 195 aa12.02□□□□□ -0.49
DDX39A-204ENST00000586558 PLA2G1BP04054 148 aaKnown RBP12.02□□□□□ -0.49
DDX39A-204ENST00000586558 FAM19A5Q7Z5A7 132 aaPredicted RBP12.02□□□□□ -0.49
DDX39A-204ENST00000586558 SND1-IT1Q9HBX3 110 aa12.02□□□□□ -0.49
DDX39A-204ENST00000586558 PLA2G2DQ9UNK4 145 aa12.01□□□□□ -0.49
DDX39A-204ENST00000586558 IGKV2D-26A0A0A0MRZ7 120 aa12□□□□□ -0.49
DDX39A-204ENST00000586558 SCGB1D1O95968 90 aa12□□□□□ -0.49
DDX39A-204ENST00000586558 SMIM13P0DJ93 91 aa12□□□□□ -0.49
DDX39A-204ENST00000586558 M0QXV9 152 aa11.99□□□□□ -0.49
DDX39A-204ENST00000586558 KRTAP7-1Q8IUC3 87 aa11.99□□□□□ -0.49
DDX39A-204ENST00000586558 HSBP1L1C9JCN9 74 aa11.98□□□□□ -0.49
DDX39A-204ENST00000586558 RPL37AP61513 92 aaKnown RBP11.98□□□□□ -0.49
DDX39A-204ENST00000586558 ANKRD39Q53RE8 183 aa11.98□□□□□ -0.49
DDX39A-204ENST00000586558 SERTAD4-AS1Q5TG53 156 aa11.98□□□□□ -0.49
DDX39A-204ENST00000586558 A0A0J9YXY3 114 aa11.97□□□□□ -0.49
DDX39A-204ENST00000586558 A0A0U1RRA0 63 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms