RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 A0A087WYN8 130 aa8.79□□□□□ -1
PRKCSH-202ENST00000585540 PTTG1IPP53801 180 aa8.79□□□□□ -1
PRKCSH-202ENST00000585540 CDKN2A-AS1Q9UH64 79 aa8.79□□□□□ -1
PRKCSH-202ENST00000585540 A0A096LNI7 61 aa8.78□□□□□ -1
PRKCSH-202ENST00000585540 LEPROTL1O95214 131 aa8.78□□□□□ -1
PRKCSH-202ENST00000585540 IGLC3P0DOY3 106 aa8.78□□□□□ -1
PRKCSH-202ENST00000585540 MAJINQ3KP22 176 aa8.78□□□□□ -1
PRKCSH-202ENST00000585540 LINC00469Q8N7U9 141 aa8.78□□□□□ -1
PRKCSH-202ENST00000585540 C7orf33Q8WU49 177 aa8.78□□□□□ -1
PRKCSH-202ENST00000585540 IGKV2-24A0A0C4DH68 120 aa8.77□□□□□ -1.01
PRKCSH-202ENST00000585540 CKS1BP61024 79 aa8.77□□□□□ -1.01
PRKCSH-202ENST00000585540 KRTAP4-5Q9BYR2 181 aa8.77□□□□□ -1.01
PRKCSH-202ENST00000585540 TRAV12-1A0A0B4J245 112 aa8.76□□□□□ -1.01
PRKCSH-202ENST00000585540 PANO1I0J062 215 aa8.76□□□□□ -1.01
PRKCSH-202ENST00000585540 CHTF8P0CG12 524 aa8.76□□□□□ -1.01
PRKCSH-202ENST00000585540 INAFM2P0DMQ5 153 aa8.76□□□□□ -1.01
PRKCSH-202ENST00000585540 FABP4P15090 132 aa8.76□□□□□ -1.01
PRKCSH-202ENST00000585540 C6orf226Q5I0X4 101 aa8.76□□□□□ -1.01
PRKCSH-202ENST00000585540 SFTA2Q6UW10 78 aa8.76□□□□□ -1.01
PRKCSH-202ENST00000585540 STPG4Q8N801 248 aa8.76□□□□□ -1.01
PRKCSH-202ENST00000585540 SMIM1B2RUZ4 78 aa8.75□□□□□ -1.01
PRKCSH-202ENST00000585540 H0Y8G0 127 aa8.75□□□□□ -1.01
PRKCSH-202ENST00000585540 RPL37AP61513 92 aaKnown RBP8.75□□□□□ -1.01
PRKCSH-202ENST00000585540 RPL18AQ02543 176 aaKnown RBP8.75□□□□□ -1.01
PRKCSH-202ENST00000585540 COA6Q5JTJ3 125 aaKnown RBP8.75□□□□□ -1.01
PRKCSH-202ENST00000585540 C6orf48Q9UBA6 75 aa8.75□□□□□ -1.01
PRKCSH-202ENST00000585540 CHTOPQ9Y3Y2 248 aaKnown RBP8.75□□□□□ -1.01
PRKCSH-202ENST00000585540 C11orf86A6NJI1 115 aa8.74□□□□□ -1.01
PRKCSH-202ENST00000585540 F8VRH5 84 aa8.74□□□□□ -1.01
PRKCSH-202ENST00000585540 SPINK8P0C7L1 97 aa8.74□□□□□ -1.01
PRKCSH-202ENST00000585540 ZNF22P17026 224 aaPredicted RBP8.74□□□□□ -1.01
PRKCSH-202ENST00000585540 GAGE2BQ13066 116 aa8.74□□□□□ -1.01
PRKCSH-202ENST00000585540 ODF1Q14990 250 aa8.74□□□□□ -1.01
PRKCSH-202ENST00000585540 TOMM7Q9P0U1 55 aa8.74□□□□□ -1.01
PRKCSH-202ENST00000585540 HSPB8Q9UJY1 196 aa8.74□□□□□ -1.01
PRKCSH-202ENST00000585540 NDUFC2-KCTD14E9PQ53 114 aa8.73□□□□□ -1.01
PRKCSH-202ENST00000585540 UNQ6190/PRO20217Q6UXQ8 127 aa8.73□□□□□ -1.01
PRKCSH-202ENST00000585540 C10orf25Q5T742 122 aa8.72□□□□□ -1.01
PRKCSH-202ENST00000585540 C2orf82Q6UX34 121 aa8.72□□□□□ -1.01
PRKCSH-202ENST00000585540 COX7B2Q8TF08 81 aa8.72□□□□□ -1.01
PRKCSH-202ENST00000585540 FAT1Q14517 4588 aa8.71□□□□□ -1.01
PRKCSH-202ENST00000585540 ABCA13Q86UQ4 5058 aa8.71□□□□□ -1.02
PRKCSH-202ENST00000585540 IGLV5-39A0A0G2JS06 123 aa8.7□□□□□ -1.02
PRKCSH-202ENST00000585540 TMEM170BQ5T4T1 132 aa8.7□□□□□ -1.02
PRKCSH-202ENST00000585540 KRTAP10-4P60372 401 aaPredicted RBP8.69□□□□□ -1.02
PRKCSH-202ENST00000585540 Q6ZRP5 223 aa8.69□□□□□ -1.02
PRKCSH-202ENST00000585540 PMCHL2Q9BQD1 86 aa8.69□□□□□ -1.02
PRKCSH-202ENST00000585540 C9orf116Q5BN46 136 aaPredicted RBP8.68□□□□□ -1.02
PRKCSH-202ENST00000585540 MAP1LC3CQ9BXW4 147 aa8.68□□□□□ -1.02
PRKCSH-202ENST00000585540 TMEM223A0PJW6 202 aa8.66□□□□□ -1.02
PRKCSH-202ENST00000585540 SYS1-DBNDD2H3BUS1 97 aa8.66□□□□□ -1.02
PRKCSH-202ENST00000585540 PLNP26678 52 aa8.65□□□□□ -1.02
PRKCSH-202ENST00000585540 COX17Q14061 63 aa8.65□□□□□ -1.02
PRKCSH-202ENST00000585540 GAGE2EQ4V326 116 aa8.65□□□□□ -1.02
PRKCSH-202ENST00000585540 GAGE2DQ9UEU5 116 aa8.65□□□□□ -1.02
PRKCSH-202ENST00000585540 A0A1W2PNN7 141 aa8.64□□□□□ -1.03
PRKCSH-202ENST00000585540 DPM2O94777 84 aa8.64□□□□□ -1.03
PRKCSH-202ENST00000585540 C3orf79P0CE67 100 aa8.64□□□□□ -1.03
PRKCSH-202ENST00000585540 HIST3H2BBQ8N257 126 aa8.64□□□□□ -1.03
PRKCSH-202ENST00000585540 IGKCP01834 107 aa8.63□□□□□ -1.03
PRKCSH-202ENST00000585540 S100A6P06703 90 aa8.63□□□□□ -1.03
PRKCSH-202ENST00000585540 PRR3P79522 188 aaKnown RBP8.63□□□□□ -1.03
PRKCSH-202ENST00000585540 OXTP01178 125 aa8.62□□□□□ -1.03
PRKCSH-202ENST00000585540 KRTDAPP60985 99 aa8.62□□□□□ -1.03
PRKCSH-202ENST00000585540 LINC01545Q5VT33 79 aa8.62□□□□□ -1.03
PRKCSH-202ENST00000585540 PET117Q6UWS5 81 aa8.62□□□□□ -1.03
PRKCSH-202ENST00000585540 TP73-AS1Q9UF72 201 aa8.62□□□□□ -1.03
PRKCSH-202ENST00000585540 PLA2G2DQ9UNK4 145 aa8.62□□□□□ -1.03
PRKCSH-202ENST00000585540 VPS13BQ7Z7G8 4022 aa8.62□□□□□ -1.03
PRKCSH-202ENST00000585540 KRTAP29-1A8MX34 341 aaPredicted RBP8.61□□□□□ -1.03
PRKCSH-202ENST00000585540 LINC00587B1AMM8 73 aa8.61□□□□□ -1.03
PRKCSH-202ENST00000585540 M0QXV9 152 aa8.61□□□□□ -1.03
PRKCSH-202ENST00000585540 HERVK_113P61574 105 aa8.61□□□□□ -1.03
PRKCSH-202ENST00000585540 HIST1H2BLQ99880 126 aa8.61□□□□□ -1.03
PRKCSH-202ENST00000585540 S100A2P29034 98 aa8.6□□□□□ -1.03
PRKCSH-202ENST00000585540 SNRPEP62304 92 aaKnown RBP8.6□□□□□ -1.03
PRKCSH-202ENST00000585540 HERV-K104P63124 156 aa8.6□□□□□ -1.03
PRKCSH-202ENST00000585540 LBHQ53QV2 105 aaPredicted RBP8.6□□□□□ -1.03
PRKCSH-202ENST00000585540 C9orf129Q5T035 196 aaKnown RBP8.6□□□□□ -1.03
PRKCSH-202ENST00000585540 TSPEAR-AS2P59090 65 aa8.59□□□□□ -1.03
PRKCSH-202ENST00000585540 FAM19A5Q7Z5A7 132 aaPredicted RBP8.59□□□□□ -1.03
PRKCSH-202ENST00000585540 ERG28Q9UKR5 140 aa8.59□□□□□ -1.03
PRKCSH-202ENST00000585540 SPINK6Q6UWN8 80 aa8.58□□□□□ -1.04
PRKCSH-202ENST00000585540 ZNF625Q96I27 306 aaPredicted RBP8.58□□□□□ -1.04
PRKCSH-202ENST00000585540 IGLV5-37A0A075B6J1 123 aa8.57□□□□□ -1.04
PRKCSH-202ENST00000585540 C5orf52A6NGY3 159 aa8.57□□□□□ -1.04
PRKCSH-202ENST00000585540 AKR1D1P51857 326 aa8.57□□□□□ -1.04
PRKCSH-202ENST00000585540 PHF5AQ7RTV0 110 aaKnown RBP8.57□□□□□ -1.04
PRKCSH-202ENST00000585540 PLEKHB2Q96CS7 222 aa8.57□□□□□ -1.04
PRKCSH-202ENST00000585540 FLG2Q5D862 2391 aaPredicted RBP8.57□□□□□ -1.04
PRKCSH-202ENST00000585540 FAM168BA1KXE4 195 aa8.56□□□□□ -1.04
PRKCSH-202ENST00000585540 LEPROTO15243 131 aa8.56□□□□□ -1.04
PRKCSH-202ENST00000585540 NMUP48645 174 aa8.56□□□□□ -1.04
PRKCSH-202ENST00000585540 UBE2BP63146 152 aa8.56□□□□□ -1.04
PRKCSH-202ENST00000585540 XAGE1AQ9HD64 81 aa8.56□□□□□ -1.04
PRKCSH-202ENST00000585540 MYMXA0A1B0GTQ4 84 aa8.55□□□□□ -1.04
PRKCSH-202ENST00000585540 C20orf202A1L168 122 aa8.55□□□□□ -1.04
PRKCSH-202ENST00000585540 J3QL48 77 aa8.55□□□□□ -1.04
PRKCSH-202ENST00000585540 PFN2P35080 140 aa8.55□□□□□ -1.04
PRKCSH-202ENST00000585540 PSORS1C2Q9UIG4 136 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms