RNA–Protein interactions for RNA: ENST00000584025.1

ITGB4-210, Transcript of integrin subunit beta 4, humanhuman

TSL 5

Gene ITGB4, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-210ENST00000584025 Q8IZM0 81 aa9.77□□□□□ -0.85
ITGB4-210ENST00000584025 STPG4Q8N801 248 aa9.77□□□□□ -0.85
ITGB4-210ENST00000584025 C6orf48Q9UBA6 75 aa9.77□□□□□ -0.85
ITGB4-210ENST00000584025 LINC00310P59036 64 aa9.76□□□□□ -0.85
ITGB4-210ENST00000584025 PLAC8Q9NZF1 115 aa9.76□□□□□ -0.85
ITGB4-210ENST00000584025 TRBV30A0A0K0K1B3 111 aa9.75□□□□□ -0.85
ITGB4-210ENST00000584025 S100A1P23297 94 aa9.75□□□□□ -0.85
ITGB4-210ENST00000584025 COX7B2Q8TF08 81 aa9.75□□□□□ -0.85
ITGB4-210ENST00000584025 CHTOPQ9Y3Y2 248 aaKnown RBP9.75□□□□□ -0.85
ITGB4-210ENST00000584025 NUPR1O60356 82 aa9.74□□□□□ -0.85
ITGB4-210ENST00000584025 LEPROTL1O95214 131 aa9.74□□□□□ -0.85
ITGB4-210ENST00000584025 ZNF22P17026 224 aaPredicted RBP9.74□□□□□ -0.85
ITGB4-210ENST00000584025 TRAV12-1A0A0B4J245 112 aa9.73□□□□□ -0.85
ITGB4-210ENST00000584025 C11orf86A6NJI1 115 aa9.73□□□□□ -0.85
ITGB4-210ENST00000584025 HIST1H2BKO60814 126 aa9.73□□□□□ -0.85
ITGB4-210ENST00000584025 ATP6V1G1O75348 118 aa9.73□□□□□ -0.85
ITGB4-210ENST00000584025 HIST1H2BJP06899 126 aa9.73□□□□□ -0.85
ITGB4-210ENST00000584025 INAFM2P0DMQ5 153 aa9.73□□□□□ -0.85
ITGB4-210ENST00000584025 HIST1H2BOP23527 126 aa9.73□□□□□ -0.85
ITGB4-210ENST00000584025 HIST1H2BBP33778 126 aa9.73□□□□□ -0.85
ITGB4-210ENST00000584025 HIST1H2BDP58876 126 aa9.73□□□□□ -0.85
ITGB4-210ENST00000584025 HIST1H2BCP62807 126 aa9.73□□□□□ -0.85
ITGB4-210ENST00000584025 HIST2H2BEQ16778 126 aa9.73□□□□□ -0.85
ITGB4-210ENST00000584025 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.73□□□□□ -0.85
ITGB4-210ENST00000584025 HIST1H2BHQ93079 126 aa9.73□□□□□ -0.85
ITGB4-210ENST00000584025 HIST1H2BNQ99877 126 aa9.73□□□□□ -0.85
ITGB4-210ENST00000584025 HIST1H2BMQ99879 126 aa9.73□□□□□ -0.85
ITGB4-210ENST00000584025 SRRM2Q9UQ35 2752 aaKnown RBP9.73□□□□□ -0.85
ITGB4-210ENST00000584025 ABCA13Q86UQ4 5058 aa9.73□□□□□ -0.85
ITGB4-210ENST00000584025 H0Y8G0 127 aa9.72□□□□□ -0.85
ITGB4-210ENST00000584025 TLX1NBP0CAT3 122 aa9.72□□□□□ -0.85
ITGB4-210ENST00000584025 CXCL5P42830 114 aa9.72□□□□□ -0.85
ITGB4-210ENST00000584025 RPL37AP61513 92 aaKnown RBP9.72□□□□□ -0.85
ITGB4-210ENST00000584025 C9orf116Q5BN46 136 aaPredicted RBP9.72□□□□□ -0.85
ITGB4-210ENST00000584025 TMEM170BQ5T4T1 132 aa9.72□□□□□ -0.85
ITGB4-210ENST00000584025 FLG2Q5D862 2391 aaPredicted RBP9.72□□□□□ -0.85
ITGB4-210ENST00000584025 F8VRH5 84 aa9.71□□□□□ -0.86
ITGB4-210ENST00000584025 FABP4P15090 132 aa9.71□□□□□ -0.86
ITGB4-210ENST00000584025 GAGE2EQ4V326 116 aa9.71□□□□□ -0.86
ITGB4-210ENST00000584025 Q6ZRP5 223 aa9.71□□□□□ -0.86
ITGB4-210ENST00000584025 C7orf33Q8WU49 177 aa9.71□□□□□ -0.86
ITGB4-210ENST00000584025 GAGE2DQ9UEU5 116 aa9.71□□□□□ -0.86
ITGB4-210ENST00000584025 HSPB8Q9UJY1 196 aa9.71□□□□□ -0.86
ITGB4-210ENST00000584025 FAT1Q14517 4588 aa9.71□□□□□ -0.86
ITGB4-210ENST00000584025 VPS13BQ7Z7G8 4022 aa9.71□□□□□ -0.86
ITGB4-210ENST00000584025 PCLOQ9Y6V0 5065 aa9.69□□□□□ -0.86
ITGB4-210ENST00000584025 NDUFC2-KCTD14E9PQ53 114 aa9.69□□□□□ -0.86
ITGB4-210ENST00000584025 IGLV5-39A0A0G2JS06 123 aa9.68□□□□□ -0.86
ITGB4-210ENST00000584025 A0A1W2PNN7 141 aa9.68□□□□□ -0.86
ITGB4-210ENST00000584025 KRTAP10-4P60372 401 aaPredicted RBP9.66□□□□□ -0.86
ITGB4-210ENST00000584025 ODF1Q14990 250 aa9.66□□□□□ -0.86
ITGB4-210ENST00000584025 TMEM223A0PJW6 202 aa9.65□□□□□ -0.86
ITGB4-210ENST00000584025 FAM168BA1KXE4 195 aa9.64□□□□□ -0.87
ITGB4-210ENST00000584025 FAM19A5Q7Z5A7 132 aaPredicted RBP9.64□□□□□ -0.87
ITGB4-210ENST00000584025 MAP1LC3CQ9BXW4 147 aa9.64□□□□□ -0.87
ITGB4-210ENST00000584025 C9orf129Q5T035 196 aaKnown RBP9.63□□□□□ -0.87
ITGB4-210ENST00000584025 PHF5AQ7RTV0 110 aaKnown RBP9.62□□□□□ -0.87
ITGB4-210ENST00000584025 PMCHL2Q9BQD1 86 aa9.62□□□□□ -0.87
ITGB4-210ENST00000584025 XAGE1AQ9HD64 81 aa9.62□□□□□ -0.87
ITGB4-210ENST00000584025 DPM2O94777 84 aa9.61□□□□□ -0.87
ITGB4-210ENST00000584025 PLNP26678 52 aa9.61□□□□□ -0.87
ITGB4-210ENST00000584025 PFN2P35080 140 aa9.6□□□□□ -0.87
ITGB4-210ENST00000584025 PRR3P79522 188 aaKnown RBP9.6□□□□□ -0.87
ITGB4-210ENST00000584025 COA6Q5JTJ3 125 aaKnown RBP9.6□□□□□ -0.87
ITGB4-210ENST00000584025 SFTA2Q6UW10 78 aa9.6□□□□□ -0.87
ITGB4-210ENST00000584025 ZNF625Q96I27 306 aaPredicted RBP9.6□□□□□ -0.87
ITGB4-210ENST00000584025 IGKCP01834 107 aa9.59□□□□□ -0.87
ITGB4-210ENST00000584025 SYS1-DBNDD2H3BUS1 97 aa9.58□□□□□ -0.88
ITGB4-210ENST00000584025 M0QXV9 152 aa9.58□□□□□ -0.88
ITGB4-210ENST00000584025 ERG28Q9UKR5 140 aa9.58□□□□□ -0.88
ITGB4-210ENST00000584025 HNRNPA3P51991 378 aaKnown RBP9.57□□□□□ -0.88
ITGB4-210ENST00000584025 HERVK_113P61574 105 aa9.57□□□□□ -0.88
ITGB4-210ENST00000584025 KRTAP7-1Q8IUC3 87 aa9.57□□□□□ -0.88
ITGB4-210ENST00000584025 SERTAD4-AS1Q5TG53 156 aa9.56□□□□□ -0.88
ITGB4-210ENST00000584025 LEPROTO15243 131 aa9.55□□□□□ -0.88
ITGB4-210ENST00000584025 UBE2BP63146 152 aa9.55□□□□□ -0.88
ITGB4-210ENST00000584025 COX17Q14061 63 aa9.55□□□□□ -0.88
ITGB4-210ENST00000584025 PLEKHB2Q96CS7 222 aa9.55□□□□□ -0.88
ITGB4-210ENST00000584025 PET117Q6UWS5 81 aa9.54□□□□□ -0.88
ITGB4-210ENST00000584025 NDUFA12Q9UI09 145 aa9.54□□□□□ -0.88
ITGB4-210ENST00000584025 PSORS1C2Q9UIG4 136 aa9.54□□□□□ -0.88
ITGB4-210ENST00000584025 C22orf24Q9Y442 160 aa9.54□□□□□ -0.88
ITGB4-210ENST00000584025 C3orf79P0CE67 100 aa9.53□□□□□ -0.88
ITGB4-210ENST00000584025 LINC00158P58513 81 aa9.53□□□□□ -0.88
ITGB4-210ENST00000584025 KRTDAPP60985 99 aa9.53□□□□□ -0.88
ITGB4-210ENST00000584025 DMBT1Q9UGM3 2413 aaPredicted RBP9.53□□□□□ -0.88
ITGB4-210ENST00000584025 A0A0U1RRA0 63 aa9.52□□□□□ -0.89
ITGB4-210ENST00000584025 MYMXA0A1B0GTQ4 84 aa9.52□□□□□ -0.89
ITGB4-210ENST00000584025 HERV-K104P63124 156 aa9.52□□□□□ -0.89
ITGB4-210ENST00000584025 LBHQ53QV2 105 aaPredicted RBP9.52□□□□□ -0.89
ITGB4-210ENST00000584025 MEIG1Q5JSS6 88 aa9.52□□□□□ -0.89
ITGB4-210ENST00000584025 C1orf137Q5JT78 98 aa9.52□□□□□ -0.89
ITGB4-210ENST00000584025 LINC01545Q5VT33 79 aa9.52□□□□□ -0.89
ITGB4-210ENST00000584025 SND1-IT1Q9HBX3 110 aa9.52□□□□□ -0.89
ITGB4-210ENST00000584025 PLA2G2DQ9UNK4 145 aa9.52□□□□□ -0.89
ITGB4-210ENST00000584025 J3QQQ9 107 aa9.51□□□□□ -0.89
ITGB4-210ENST00000584025 LGALS3P17931 250 aaKnown RBP9.51□□□□□ -0.89
ITGB4-210ENST00000584025 TSPEAR-AS2P59090 65 aa9.51□□□□□ -0.89
ITGB4-210ENST00000584025 KRTAP11-1Q8IUC1 163 aa9.51□□□□□ -0.89
ITGB4-210ENST00000584025 PKHD1L1Q86WI1 4243 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms