RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 KRTDAPP60985 99 aa6.04□□□□□ -1.44
UBBP4-201ENST00000583708 LOC107984640A0A0U1RRK4 108 aa6.03□□□□□ -1.44
UBBP4-201ENST00000583708 SPINK8P0C7L1 97 aa6.03□□□□□ -1.44
UBBP4-201ENST00000583708 NMUP48645 174 aa6.03□□□□□ -1.44
UBBP4-201ENST00000583708 HERV-K104P63124 156 aa6.03□□□□□ -1.44
UBBP4-201ENST00000583708 SDIM1Q6ZPB5 146 aa6.03□□□□□ -1.44
UBBP4-201ENST00000583708 TOMM7Q9P0U1 55 aa6.03□□□□□ -1.44
UBBP4-201ENST00000583708 LEPROTO15243 131 aa6.02□□□□□ -1.45
UBBP4-201ENST00000583708 COX17Q14061 63 aa6.02□□□□□ -1.45
UBBP4-201ENST00000583708 Q6ZRU5 148 aa6.02□□□□□ -1.45
UBBP4-201ENST00000583708 PKHD1P08F94 4074 aa6.02□□□□□ -1.45
UBBP4-201ENST00000583708 E9PLD3 99 aa6.01□□□□□ -1.45
UBBP4-201ENST00000583708 UNQ6190/PRO20217Q6UXQ8 127 aa6.01□□□□□ -1.45
UBBP4-201ENST00000583708 MYMXA0A1B0GTQ4 84 aa6□□□□□ -1.45
UBBP4-201ENST00000583708 NDUFC2-KCTD14E9PQ53 114 aa6□□□□□ -1.45
UBBP4-201ENST00000583708 CDK2AP2O75956 126 aa6□□□□□ -1.45
UBBP4-201ENST00000583708 CIRBPQ14011 172 aaKnown RBP6□□□□□ -1.45
UBBP4-201ENST00000583708 Q6ZSA8 131 aa6□□□□□ -1.45
UBBP4-201ENST00000583708 DYNC1H1Q14204 4646 aaKnown RBP5.99□□□□□ -1.45
UBBP4-201ENST00000583708 HSBP1L1C9JCN9 74 aa5.99□□□□□ -1.45
UBBP4-201ENST00000583708 J3QQQ9 107 aa5.99□□□□□ -1.45
UBBP4-201ENST00000583708 KRTAP10-1P60331 282 aa5.99□□□□□ -1.45
UBBP4-201ENST00000583708 LINC00526Q96FQ7 95 aa5.99□□□□□ -1.45
UBBP4-201ENST00000583708 ZNF625Q96I27 306 aaPredicted RBP5.99□□□□□ -1.45
UBBP4-201ENST00000583708 C6orf48Q9UBA6 75 aa5.99□□□□□ -1.45
UBBP4-201ENST00000583708 LGALS3P17931 250 aaKnown RBP5.98□□□□□ -1.45
UBBP4-201ENST00000583708 C10orf25Q5T742 122 aa5.98□□□□□ -1.45
UBBP4-201ENST00000583708 C2orf82Q6UX34 121 aa5.98□□□□□ -1.45
UBBP4-201ENST00000583708 PMCHL2Q9BQD1 86 aa5.98□□□□□ -1.45
UBBP4-201ENST00000583708 NDUFA12Q9UI09 145 aa5.98□□□□□ -1.45
UBBP4-201ENST00000583708 DNAH5Q8TE73 4624 aa5.98□□□□□ -1.45
UBBP4-201ENST00000583708 SCGB1D1O95968 90 aa5.97□□□□□ -1.45
UBBP4-201ENST00000583708 PTTG1IPP53801 180 aa5.97□□□□□ -1.45
UBBP4-201ENST00000583708 JOSD1Q15040 202 aaPredicted RBP5.97□□□□□ -1.45
UBBP4-201ENST00000583708 LRP1BQ9NZR2 4599 aa5.97□□□□□ -1.45
UBBP4-201ENST00000583708 EPM2AB3EWF7 344 aa5.96□□□□□ -1.46
UBBP4-201ENST00000583708 DPH3Q96FX2 82 aa5.96□□□□□ -1.46
UBBP4-201ENST00000583708 ERG28Q9UKR5 140 aa5.96□□□□□ -1.46
UBBP4-201ENST00000583708 TMA7Q9Y2S6 64 aaKnown RBP5.96□□□□□ -1.46
UBBP4-201ENST00000583708 DNAH8Q96JB1 4490 aa5.95□□□□□ -1.46
UBBP4-201ENST00000583708 TIMM17BO60830 172 aa5.95□□□□□ -1.46
UBBP4-201ENST00000583708 STPG4Q8N801 248 aa5.95□□□□□ -1.46
UBBP4-201ENST00000583708 SPACA4Q8TDM5 124 aa5.95□□□□□ -1.46
UBBP4-201ENST00000583708 PLAC8Q9NZF1 115 aa5.95□□□□□ -1.46
UBBP4-201ENST00000583708 RPL18AQ02543 176 aaKnown RBP5.94□□□□□ -1.46
UBBP4-201ENST00000583708 GAGE2BQ13066 116 aa5.94□□□□□ -1.46
UBBP4-201ENST00000583708 Q6ZRP5 223 aa5.94□□□□□ -1.46
UBBP4-201ENST00000583708 PLA2G2DQ9UNK4 145 aa5.94□□□□□ -1.46
UBBP4-201ENST00000583708 A0A096LNI7 61 aa5.93□□□□□ -1.46
UBBP4-201ENST00000583708 FUSP35637 526 aaKnown RBP eCLIP5.93□□□□□ -1.46
UBBP4-201ENST00000583708 MAJINQ3KP22 176 aa5.93□□□□□ -1.46
UBBP4-201ENST00000583708 LINC01620Q4KN68 170 aa5.93□□□□□ -1.46
UBBP4-201ENST00000583708 Q6ZVH6 145 aa5.93□□□□□ -1.46
UBBP4-201ENST00000583708 COPS9Q8WXC6 57 aa5.93□□□□□ -1.46
UBBP4-201ENST00000583708 A0A087WYN8 130 aa5.92□□□□□ -1.46
UBBP4-201ENST00000583708 LOC107984156A0A0G2JMH3 177 aa5.92□□□□□ -1.46
UBBP4-201ENST00000583708 A0A0J9YXY3 114 aa5.92□□□□□ -1.46
UBBP4-201ENST00000583708 XGP55808 180 aa5.92□□□□□ -1.46
UBBP4-201ENST00000583708 LINC00158P58513 81 aa5.92□□□□□ -1.46
UBBP4-201ENST00000583708 RPL24P83731 157 aaKnown RBP5.92□□□□□ -1.46
UBBP4-201ENST00000583708 C9orf116Q5BN46 136 aaPredicted RBP5.92□□□□□ -1.46
UBBP4-201ENST00000583708 MEIG1Q5JSS6 88 aa5.92□□□□□ -1.46
UBBP4-201ENST00000583708 ARL17AQ8IVW1 177 aa5.92□□□□□ -1.46
UBBP4-201ENST00000583708 PPDPFQ9H3Y8 114 aa5.92□□□□□ -1.46
UBBP4-201ENST00000583708 FAM30AQ9NZY2 134 aa5.92□□□□□ -1.46
UBBP4-201ENST00000583708 TP73-AS1Q9UF72 201 aa5.92□□□□□ -1.46
UBBP4-201ENST00000583708 EPPK1P58107 5090 aaKnown RBP5.91□□□□□ -1.46
UBBP4-201ENST00000583708 IGKV2-24A0A0C4DH68 120 aa5.91□□□□□ -1.46
UBBP4-201ENST00000583708 ZNF815PA8K554 130 aa5.91□□□□□ -1.46
UBBP4-201ENST00000583708 DLEU1O43261 78 aa5.91□□□□□ -1.46
UBBP4-201ENST00000583708 PFN2P35080 140 aa5.91□□□□□ -1.46
UBBP4-201ENST00000583708 TSPEAR-AS2P59090 65 aa5.91□□□□□ -1.46
UBBP4-201ENST00000583708 GAGE2EQ4V326 116 aa5.91□□□□□ -1.46
UBBP4-201ENST00000583708 LBHQ53QV2 105 aaPredicted RBP5.91□□□□□ -1.46
UBBP4-201ENST00000583708 ANKRD39Q53RE8 183 aa5.91□□□□□ -1.46
UBBP4-201ENST00000583708 CIRBP-AS1Q8TBR5 109 aa5.91□□□□□ -1.46
UBBP4-201ENST00000583708 GAGE2DQ9UEU5 116 aa5.91□□□□□ -1.46
UBBP4-201ENST00000583708 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.91□□□□□ -1.46
UBBP4-201ENST00000583708 IGLV5-37A0A075B6J1 123 aa5.9□□□□□ -1.46
UBBP4-201ENST00000583708 SMIM13P0DJ93 91 aa5.9□□□□□ -1.46
UBBP4-201ENST00000583708 SCXQ7RTU7 201 aa5.9□□□□□ -1.46
UBBP4-201ENST00000583708 ATOH7Q8N100 152 aa5.9□□□□□ -1.46
UBBP4-201ENST00000583708 VAMP8Q9BV40 100 aa5.9□□□□□ -1.46
UBBP4-201ENST00000583708 SND1-IT1Q9HBX3 110 aa5.9□□□□□ -1.46
UBBP4-201ENST00000583708 IGKV2D-26A0A0A0MRZ7 120 aa5.89□□□□□ -1.47
UBBP4-201ENST00000583708 TMEM238C9JI98 176 aa5.89□□□□□ -1.47
UBBP4-201ENST00000583708 FAM229AH3BQW9 127 aa5.89□□□□□ -1.47
UBBP4-201ENST00000583708 CHTF8P0CG12 524 aa5.89□□□□□ -1.47
UBBP4-201ENST00000583708 SCGB1D4Q6XE38 83 aa5.89□□□□□ -1.47
UBBP4-201ENST00000583708 BOD1L2Q8IYS8 172 aa5.89□□□□□ -1.47
UBBP4-201ENST00000583708 C7orf33Q8WU49 177 aa5.89□□□□□ -1.47
UBBP4-201ENST00000583708 BIRC6Q9NR09 4857 aa5.88□□□□□ -1.47
UBBP4-201ENST00000583708 APOBP04114 4563 aaKnown RBP5.88□□□□□ -1.47
UBBP4-201ENST00000583708 COX8AP10176 69 aa5.88□□□□□ -1.47
UBBP4-201ENST00000583708 IFITM1P13164 125 aa5.88□□□□□ -1.47
UBBP4-201ENST00000583708 S100A12P80511 92 aa5.88□□□□□ -1.47
UBBP4-201ENST00000583708 C9orf129Q5T035 196 aaKnown RBP5.88□□□□□ -1.47
UBBP4-201ENST00000583708 MIR7-3HGQ8N6C7 128 aa5.88□□□□□ -1.47
UBBP4-201ENST00000583708 MIEN1Q9BRT3 115 aa5.88□□□□□ -1.47
UBBP4-201ENST00000583708 A0A1W2PNN7 141 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms