RNA–Protein interactions for RNA: ENST00000582050.1

EIF4A1-222, Transcript of eukaryotic translation initiation factor 4A1, human

TSL 5

Gene EIF4A1, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A1-222	ENST00000582050	CDPF1	Q6NVV7	123 aa		11.68	□□□□□ -0.54
EIF4A1-222	ENST00000582050	CARD19	Q96LW7	228 aa		11.68	□□□□□ -0.54
EIF4A1-222	ENST00000582050	TRBV30	A0A0K0K1B3	111 aa		11.67	□□□□□ -0.54
EIF4A1-222	ENST00000582050	LGALS3	P17931	250 aa	Known RBP	11.67	□□□□□ -0.54
EIF4A1-222	ENST00000582050	NMU	P48645	174 aa		11.67	□□□□□ -0.54
EIF4A1-222	ENST00000582050	C2orf82	Q6UX34	121 aa		11.67	□□□□□ -0.54
EIF4A1-222	ENST00000582050	RNF151	Q2KHN1	245 aa		11.66	□□□□□ -0.54
EIF4A1-222	ENST00000582050	ANKRD39	Q53RE8	183 aa		11.66	□□□□□ -0.54
EIF4A1-222	ENST00000582050	UNQ6190/PRO20217	Q6UXQ8	127 aa		11.66	□□□□□ -0.54
EIF4A1-222	ENST00000582050		Q6ZRU5	148 aa		11.66	□□□□□ -0.54
EIF4A1-222	ENST00000582050	IGLV5-52	A0A0A0MRZ9	124 aa		11.65	□□□□□ -0.54
EIF4A1-222	ENST00000582050	MYMX	A0A1B0GTQ4	84 aa		11.65	□□□□□ -0.54
EIF4A1-222	ENST00000582050		A0A1B0GVY2	172 aa		11.65	□□□□□ -0.54
EIF4A1-222	ENST00000582050	MAJIN	Q3KP22	176 aa		11.65	□□□□□ -0.54
EIF4A1-222	ENST00000582050	C9orf163	Q8N9P6	203 aa		11.65	□□□□□ -0.54
EIF4A1-222	ENST00000582050	ZNF625	Q96I27	306 aa	Predicted RBP	11.65	□□□□□ -0.54
EIF4A1-222	ENST00000582050	NDUFA12	Q9UI09	145 aa		11.65	□□□□□ -0.54
EIF4A1-222	ENST00000582050	PKD1	P98161	4303 aa		11.64	□□□□□ -0.55
EIF4A1-222	ENST00000582050	TSPEAR-AS2	P59090	65 aa		11.64	□□□□□ -0.55
EIF4A1-222	ENST00000582050	KRTAP10-2	P60368	255 aa		11.64	□□□□□ -0.55
EIF4A1-222	ENST00000582050	C10orf25	Q5T742	122 aa		11.64	□□□□□ -0.55
EIF4A1-222	ENST00000582050	VAMP8	Q9BV40	100 aa		11.64	□□□□□ -0.55
EIF4A1-222	ENST00000582050	HECTD4	Q9Y4D8	3996 aa		11.63	□□□□□ -0.55
EIF4A1-222	ENST00000582050	IGKV2D-26	A0A0A0MRZ7	120 aa		11.63	□□□□□ -0.55
EIF4A1-222	ENST00000582050	HERV-K104	P63124	156 aa		11.63	□□□□□ -0.55
EIF4A1-222	ENST00000582050	C6orf48	Q9UBA6	75 aa		11.63	□□□□□ -0.55
EIF4A1-222	ENST00000582050	PKIG	Q9Y2B9	76 aa		11.63	□□□□□ -0.55
EIF4A1-222	ENST00000582050	DNAH11	Q96DT5	4516 aa		11.62	□□□□□ -0.55
EIF4A1-222	ENST00000582050	LINC00587	B1AMM8	73 aa		11.6	□□□□□ -0.55
EIF4A1-222	ENST00000582050	SMIM6	P0DI80	62 aa		11.6	□□□□□ -0.55
EIF4A1-222	ENST00000582050	PAM16	Q9Y3D7	125 aa		11.6	□□□□□ -0.55
EIF4A1-222	ENST00000582050	TLX1NB	P0CAT3	122 aa		11.59	□□□□□ -0.55
EIF4A1-222	ENST00000582050	S100A12	P80511	92 aa		11.59	□□□□□ -0.55
EIF4A1-222	ENST00000582050	COX17	Q14061	63 aa		11.59	□□□□□ -0.55
EIF4A1-222	ENST00000582050	SPATA45	Q537H7	98 aa		11.59	□□□□□ -0.55
EIF4A1-222	ENST00000582050	LOC107984640	A0A0U1RRK4	108 aa		11.58	□□□□□ -0.56
EIF4A1-222	ENST00000582050	ZNF815P	A8K554	130 aa		11.58	□□□□□ -0.56
EIF4A1-222	ENST00000582050	GCSH	P23434	173 aa		11.57	□□□□□ -0.56
EIF4A1-222	ENST00000582050	FUS	P35637	526 aa	Known RBP eCLIP	11.57	□□□□□ -0.56
EIF4A1-222	ENST00000582050	C9orf116	Q5BN46	136 aa	Predicted RBP	11.57	□□□□□ -0.56
EIF4A1-222	ENST00000582050	ERG28	Q9UKR5	140 aa		11.57	□□□□□ -0.56
EIF4A1-222	ENST00000582050	SDIM1	Q6ZPB5	146 aa		11.56	□□□□□ -0.56
EIF4A1-222	ENST00000582050	PCP2	Q8IVA1	136 aa		11.56	□□□□□ -0.56
EIF4A1-222	ENST00000582050	NDUFC2-KCTD14	E9PQ53	114 aa		11.55	□□□□□ -0.56
EIF4A1-222	ENST00000582050	MEIG1	Q5JSS6	88 aa		11.55	□□□□□ -0.56
EIF4A1-222	ENST00000582050	TTTY13	Q9BZ97	58 aa		11.55	□□□□□ -0.56
EIF4A1-222	ENST00000582050		A0A0J9YXY3	114 aa		11.54	□□□□□ -0.56
EIF4A1-222	ENST00000582050	COX8A	P10176	69 aa		11.54	□□□□□ -0.56
EIF4A1-222	ENST00000582050	CIRBP	Q14011	172 aa	Known RBP	11.54	□□□□□ -0.56
EIF4A1-222	ENST00000582050	LINC01620	Q4KN68	170 aa		11.54	□□□□□ -0.56
EIF4A1-222	ENST00000582050	C16orf90	A8MZG2	172 aa		11.53	□□□□□ -0.56
EIF4A1-222	ENST00000582050	PFN2	P35080	140 aa		11.53	□□□□□ -0.56
EIF4A1-222	ENST00000582050	PKHD1	P08F94	4074 aa		11.52	□□□□□ -0.57
EIF4A1-222	ENST00000582050	DLEU1	O43261	78 aa		11.52	□□□□□ -0.57
EIF4A1-222	ENST00000582050	LINC00158	P58513	81 aa		11.52	□□□□□ -0.57
EIF4A1-222	ENST00000582050	RPL18A	Q02543	176 aa	Known RBP	11.52	□□□□□ -0.57
EIF4A1-222	ENST00000582050	SCGB1D4	Q6XE38	83 aa		11.52	□□□□□ -0.57
EIF4A1-222	ENST00000582050	BOD1L2	Q8IYS8	172 aa		11.52	□□□□□ -0.57
EIF4A1-222	ENST00000582050	LINC00474	Q9P2X8	69 aa		11.52	□□□□□ -0.57
EIF4A1-222	ENST00000582050	TIMM17B	O60830	172 aa		11.51	□□□□□ -0.57
EIF4A1-222	ENST00000582050	SMIM13	P0DJ93	91 aa		11.51	□□□□□ -0.57
EIF4A1-222	ENST00000582050		Q6ZRP5	223 aa		11.51	□□□□□ -0.57
EIF4A1-222	ENST00000582050	DNAH5	Q8TE73	4624 aa		11.51	□□□□□ -0.57
EIF4A1-222	ENST00000582050	PTTG1IP	P53801	180 aa		11.5	□□□□□ -0.57
EIF4A1-222	ENST00000582050	GAGE2B	Q13066	116 aa		11.5	□□□□□ -0.57
EIF4A1-222	ENST00000582050	C14orf144	Q96I85	54 aa		11.5	□□□□□ -0.57
EIF4A1-222	ENST00000582050	SLC25A34	Q6PIV7	304 aa		11.49	□□□□□ -0.57
EIF4A1-222	ENST00000582050		A0A096LNI7	61 aa		11.48	□□□□□ -0.57
EIF4A1-222	ENST00000582050		A0A0U1RRA0	63 aa		11.48	□□□□□ -0.57
EIF4A1-222	ENST00000582050	KRTAP10-1	P60331	282 aa		11.48	□□□□□ -0.57
EIF4A1-222	ENST00000582050	GAGE2E	Q4V326	116 aa		11.48	□□□□□ -0.57
EIF4A1-222	ENST00000582050	GAGE2D	Q9UEU5	116 aa		11.48	□□□□□ -0.57
EIF4A1-222	ENST00000582050	TMEM238	C9JI98	176 aa		11.47	□□□□□ -0.57
EIF4A1-222	ENST00000582050	C12orf57	Q99622	126 aa		11.47	□□□□□ -0.57
EIF4A1-222	ENST00000582050	IGKV2-24	A0A0C4DH68	120 aa		11.46	□□□□□ -0.57
EIF4A1-222	ENST00000582050	MIR7-3HG	Q8N6C7	128 aa		11.46	□□□□□ -0.57
EIF4A1-222	ENST00000582050		Q6ZVH6	145 aa		11.45	□□□□□ -0.58
EIF4A1-222	ENST00000582050	LITAF	Q99732	161 aa		11.45	□□□□□ -0.58
EIF4A1-222	ENST00000582050	SND1-IT1	Q9HBX3	110 aa		11.45	□□□□□ -0.58
EIF4A1-222	ENST00000582050	ADAMTSL4-AS1	Q5T5F5	129 aa		11.44	□□□□□ -0.58
EIF4A1-222	ENST00000582050		Q6ZSA8	131 aa		11.44	□□□□□ -0.58
EIF4A1-222	ENST00000582050	XAGE1A	Q9HD64	81 aa		11.44	□□□□□ -0.58
EIF4A1-222	ENST00000582050	CHTF8	P0CG12	524 aa		11.43	□□□□□ -0.58
EIF4A1-222	ENST00000582050	LINC00518	Q8N0U6	118 aa		11.43	□□□□□ -0.58
EIF4A1-222	ENST00000582050	SPACA4	Q8TDM5	124 aa		11.43	□□□□□ -0.58
EIF4A1-222	ENST00000582050	DPH3	Q96FX2	82 aa		11.43	□□□□□ -0.58
EIF4A1-222	ENST00000582050	SPANXD	Q9BXN6	97 aa		11.43	□□□□□ -0.58
EIF4A1-222	ENST00000582050	SPANXC	Q9NY87	97 aa		11.43	□□□□□ -0.58
EIF4A1-222	ENST00000582050	HIGD1B	Q9P298	99 aa		11.43	□□□□□ -0.58
EIF4A1-222	ENST00000582050	UQCR10	Q9UDW1	63 aa		11.43	□□□□□ -0.58
EIF4A1-222	ENST00000582050	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	11.43	□□□□□ -0.58
EIF4A1-222	ENST00000582050	LOC107984156	A0A0G2JMH3	177 aa		11.42	□□□□□ -0.58
EIF4A1-222	ENST00000582050	C9orf129	Q5T035	196 aa	Known RBP	11.42	□□□□□ -0.58
EIF4A1-222	ENST00000582050	ARL17A	Q8IVW1	177 aa		11.42	□□□□□ -0.58
EIF4A1-222	ENST00000582050	DAND5	Q8N907	189 aa		11.42	□□□□□ -0.58
EIF4A1-222	ENST00000582050	COPS9	Q8WXC6	57 aa		11.42	□□□□□ -0.58
EIF4A1-222	ENST00000582050	MIEN1	Q9BRT3	115 aa		11.41	□□□□□ -0.58
EIF4A1-222	ENST00000582050	SPANXB1	Q9NS25	103 aa	Predicted RBP	11.41	□□□□□ -0.58
EIF4A1-222	ENST00000582050	FAM30A	Q9NZY2	134 aa		11.41	□□□□□ -0.58
EIF4A1-222	ENST00000582050	PANO1	I0J062	215 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms