RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 CXCL5P42830 114 aa10.36□□□□□ -0.75
IFT20-210ENST00000580357 RPL18AQ02543 176 aaKnown RBP10.36□□□□□ -0.75
IFT20-210ENST00000580357 PMCHL1Q16048 86 aa10.36□□□□□ -0.75
IFT20-210ENST00000580357 C10orf25Q5T742 122 aa10.36□□□□□ -0.75
IFT20-210ENST00000580357 C6orf48Q9UBA6 75 aa10.36□□□□□ -0.75
IFT20-210ENST00000580357 HSBP1O75506 76 aa10.34□□□□□ -0.75
IFT20-210ENST00000580357 IGLC3P0DOY3 106 aa10.34□□□□□ -0.75
IFT20-210ENST00000580357 KRTAP10-4P60372 401 aaPredicted RBP10.34□□□□□ -0.75
IFT20-210ENST00000580357 C2orf82Q6UX34 121 aa10.34□□□□□ -0.75
IFT20-210ENST00000580357 SMIM1B2RUZ4 78 aa10.33□□□□□ -0.76
IFT20-210ENST00000580357 SRRM2Q9UQ35 2752 aaKnown RBP10.33□□□□□ -0.76
IFT20-210ENST00000580357 NDUFC2-KCTD14E9PQ53 114 aa10.32□□□□□ -0.76
IFT20-210ENST00000580357 F8VRH5 84 aa10.32□□□□□ -0.76
IFT20-210ENST00000580357 Q6ZRP5 223 aa10.32□□□□□ -0.76
IFT20-210ENST00000580357 COX7B2Q8TF08 81 aa10.32□□□□□ -0.76
IFT20-210ENST00000580357 IFI27L1Q96BM0 104 aa10.32□□□□□ -0.76
IFT20-210ENST00000580357 VPS13BQ7Z7G8 4022 aa10.31□□□□□ -0.76
IFT20-210ENST00000580357 C9orf116Q5BN46 136 aaPredicted RBP10.31□□□□□ -0.76
IFT20-210ENST00000580357 TRAV12-1A0A0B4J245 112 aa10.3□□□□□ -0.76
IFT20-210ENST00000580357 A0A1W2PNN7 141 aa10.29□□□□□ -0.76
IFT20-210ENST00000580357 SPINK8P0C7L1 97 aa10.29□□□□□ -0.76
IFT20-210ENST00000580357 CHTOPQ9Y3Y2 248 aaKnown RBP10.29□□□□□ -0.76
IFT20-210ENST00000580357 FAT1Q14517 4588 aa10.29□□□□□ -0.76
IFT20-210ENST00000580357 GAGE2EQ4V326 116 aa10.28□□□□□ -0.76
IFT20-210ENST00000580357 GAGE2DQ9UEU5 116 aa10.28□□□□□ -0.76
IFT20-210ENST00000580357 ZNF22P17026 224 aaPredicted RBP10.27□□□□□ -0.77
IFT20-210ENST00000580357 FAM19A2Q8N3H0 131 aa10.27□□□□□ -0.77
IFT20-210ENST00000580357 IGLV5-39A0A0G2JS06 123 aa10.26□□□□□ -0.77
IFT20-210ENST00000580357 SERF1AO75920 110 aa10.26□□□□□ -0.77
IFT20-210ENST00000580357 LEPROTL1O95214 131 aa10.26□□□□□ -0.77
IFT20-210ENST00000580357 TMEM170BQ5T4T1 132 aa10.26□□□□□ -0.77
IFT20-210ENST00000580357 FLG2Q5D862 2391 aaPredicted RBP10.26□□□□□ -0.77
IFT20-210ENST00000580357 SFTA2Q6UW10 78 aa10.25□□□□□ -0.77
IFT20-210ENST00000580357 HSPB8Q9UJY1 196 aa10.25□□□□□ -0.77
IFT20-210ENST00000580357 C11orf86A6NJI1 115 aa10.24□□□□□ -0.77
IFT20-210ENST00000580357 KRTAP29-1A8MX34 341 aaPredicted RBP10.24□□□□□ -0.77
IFT20-210ENST00000580357 OXTP01178 125 aa10.24□□□□□ -0.77
IFT20-210ENST00000580357 SCO1O75880 301 aa10.23□□□□□ -0.77
IFT20-210ENST00000580357 ODF1Q14990 250 aa10.23□□□□□ -0.77
IFT20-210ENST00000580357 PRR3P79522 188 aaKnown RBP10.22□□□□□ -0.77
IFT20-210ENST00000580357 J3QL48 77 aa10.21□□□□□ -0.77
IFT20-210ENST00000580357 LINC00310P59036 64 aa10.21□□□□□ -0.77
IFT20-210ENST00000580357 C9orf129Q5T035 196 aaKnown RBP10.2□□□□□ -0.78
IFT20-210ENST00000580357 PHF5AQ7RTV0 110 aaKnown RBP10.2□□□□□ -0.78
IFT20-210ENST00000580357 FAM19A5Q7Z5A7 132 aaPredicted RBP10.2□□□□□ -0.78
IFT20-210ENST00000580357 TMEM223A0PJW6 202 aa10.19□□□□□ -0.78
IFT20-210ENST00000580357 FAM168BA1KXE4 195 aa10.19□□□□□ -0.78
IFT20-210ENST00000580357 NUPR1O60356 82 aa10.19□□□□□ -0.78
IFT20-210ENST00000580357 S100A1P23297 94 aa10.19□□□□□ -0.78
IFT20-210ENST00000580357 COX17Q14061 63 aa10.19□□□□□ -0.78
IFT20-210ENST00000580357 HIST1H2BKO60814 126 aa10.18□□□□□ -0.78
IFT20-210ENST00000580357 HIST1H2BJP06899 126 aa10.18□□□□□ -0.78
IFT20-210ENST00000580357 FABP4P15090 132 aa10.18□□□□□ -0.78
IFT20-210ENST00000580357 HIST1H2BOP23527 126 aa10.18□□□□□ -0.78
IFT20-210ENST00000580357 HIST1H2BBP33778 126 aa10.18□□□□□ -0.78
IFT20-210ENST00000580357 HNRNPA3P51991 378 aaKnown RBP10.18□□□□□ -0.78
IFT20-210ENST00000580357 HIST1H2BDP58876 126 aa10.18□□□□□ -0.78
IFT20-210ENST00000580357 HIST1H2BCP62807 126 aa10.18□□□□□ -0.78
IFT20-210ENST00000580357 HIST2H2BEQ16778 126 aa10.18□□□□□ -0.78
IFT20-210ENST00000580357 LBHQ53QV2 105 aaPredicted RBP10.18□□□□□ -0.78
IFT20-210ENST00000580357 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.18□□□□□ -0.78
IFT20-210ENST00000580357 SPINK6Q6UWN8 80 aa10.18□□□□□ -0.78
IFT20-210ENST00000580357 HIST1H2BHQ93079 126 aa10.18□□□□□ -0.78
IFT20-210ENST00000580357 HIST1H2BNQ99877 126 aa10.18□□□□□ -0.78
IFT20-210ENST00000580357 HIST1H2BMQ99879 126 aa10.18□□□□□ -0.78
IFT20-210ENST00000580357 M0QXV9 152 aa10.17□□□□□ -0.78
IFT20-210ENST00000580357 PLNP26678 52 aa10.17□□□□□ -0.78
IFT20-210ENST00000580357 MAP1LC3CQ9BXW4 147 aa10.17□□□□□ -0.78
IFT20-210ENST00000580357 XAGE1AQ9HD64 81 aa10.17□□□□□ -0.78
IFT20-210ENST00000580357 H0Y8G0 127 aa10.16□□□□□ -0.78
IFT20-210ENST00000580357 TP73-AS1Q9UF72 201 aa10.16□□□□□ -0.78
IFT20-210ENST00000580357 PSORS1C2Q9UIG4 136 aa10.16□□□□□ -0.78
IFT20-210ENST00000580357 PLA2G2DQ9UNK4 145 aa10.16□□□□□ -0.78
IFT20-210ENST00000580357 MYCBP2O75592 4640 aa10.16□□□□□ -0.78
IFT20-210ENST00000580357 UBE2BP63146 152 aa10.15□□□□□ -0.78
IFT20-210ENST00000580357 SRSF9Q13242 221 aaKnown RBP eCLIP10.15□□□□□ -0.78
IFT20-210ENST00000580357 KRTAP7-1Q8IUC3 87 aa10.15□□□□□ -0.78
IFT20-210ENST00000580357 C22orf24Q9Y442 160 aa10.15□□□□□ -0.78
IFT20-210ENST00000580357 PFN2P35080 140 aa10.14□□□□□ -0.79
IFT20-210ENST00000580357 ERG28Q9UKR5 140 aa10.14□□□□□ -0.79
IFT20-210ENST00000580357 LINC00587B1AMM8 73 aa10.13□□□□□ -0.79
IFT20-210ENST00000580357 DPM2O94777 84 aa10.13□□□□□ -0.79
IFT20-210ENST00000580357 C1orf137Q5JT78 98 aa10.13□□□□□ -0.79
IFT20-210ENST00000580357 ZNF625Q96I27 306 aaPredicted RBP10.13□□□□□ -0.79
IFT20-210ENST00000580357 HERV-K104P63124 156 aa10.12□□□□□ -0.79
IFT20-210ENST00000580357 SERTAD4-AS1Q5TG53 156 aa10.12□□□□□ -0.79
IFT20-210ENST00000580357 REG3GQ6UW15 175 aa10.12□□□□□ -0.79
IFT20-210ENST00000580357 IGKCP01834 107 aa10.11□□□□□ -0.79
IFT20-210ENST00000580357 HERVK_113P61574 105 aa10.11□□□□□ -0.79
IFT20-210ENST00000580357 IGLV5-37A0A075B6J1 123 aa10.1□□□□□ -0.79
IFT20-210ENST00000580357 COA6Q5JTJ3 125 aaKnown RBP10.1□□□□□ -0.79
IFT20-210ENST00000580357 MRPL55Q7Z7F7 128 aaKnown RBP10.1□□□□□ -0.79
IFT20-210ENST00000580357 PLEKHB2Q96CS7 222 aa10.1□□□□□ -0.79
IFT20-210ENST00000580357 MYMXA0A1B0GTQ4 84 aa10.09□□□□□ -0.79
IFT20-210ENST00000580357 LEPROTO15243 131 aa10.09□□□□□ -0.79
IFT20-210ENST00000580357 ATP6V1G1O75348 118 aa10.09□□□□□ -0.79
IFT20-210ENST00000580357 IGLV7-43P04211 117 aa10.09□□□□□ -0.79
IFT20-210ENST00000580357 LINC00158P58513 81 aa10.09□□□□□ -0.79
IFT20-210ENST00000580357 RPL24P83731 157 aaKnown RBP10.09□□□□□ -0.79
IFT20-210ENST00000580357 NKAPP1Q8N9T2 125 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms