RNA–Protein interactions for RNA: ENST00000580004.1

NEK4P2-201, Transcript of NIMA-related kinase 4 pseudogene 2, humanhuman

BASIC

Gene NEK4P2, Length 1,012 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P2-201ENST00000580004 BAGE3Q86Y29 109 aa11.79□□□□□ -0.52
NEK4P2-201ENST00000580004 C7orf33Q8WU49 177 aa11.79□□□□□ -0.52
NEK4P2-201ENST00000580004 C6orf48Q9UBA6 75 aa11.79□□□□□ -0.52
NEK4P2-201ENST00000580004 SMIM1B2RUZ4 78 aa11.78□□□□□ -0.52
NEK4P2-201ENST00000580004 RPL18AQ02543 176 aaKnown RBP11.78□□□□□ -0.52
NEK4P2-201ENST00000580004 C10orf25Q5T742 122 aa11.78□□□□□ -0.52
NEK4P2-201ENST00000580004 HSBP1O75506 76 aa11.77□□□□□ -0.53
NEK4P2-201ENST00000580004 TOMM7Q9P0U1 55 aa11.77□□□□□ -0.53
NEK4P2-201ENST00000580004 NDUFA6P56556 154 aa11.76□□□□□ -0.53
NEK4P2-201ENST00000580004 C2orf82Q6UX34 121 aa11.76□□□□□ -0.53
NEK4P2-201ENST00000580004 NDUFC2-KCTD14E9PQ53 114 aa11.75□□□□□ -0.53
NEK4P2-201ENST00000580004 F8VRH5 84 aa11.75□□□□□ -0.53
NEK4P2-201ENST00000580004 MYCBP2O75592 4640 aa11.75□□□□□ -0.53
NEK4P2-201ENST00000580004 TRAV12-1A0A0B4J245 112 aa11.74□□□□□ -0.53
NEK4P2-201ENST00000580004 Q6ZRP5 223 aa11.74□□□□□ -0.53
NEK4P2-201ENST00000580004 COX7B2Q8TF08 81 aa11.73□□□□□ -0.53
NEK4P2-201ENST00000580004 IFI27L1Q96BM0 104 aa11.73□□□□□ -0.53
NEK4P2-201ENST00000580004 FLG2Q5D862 2391 aaPredicted RBP11.72□□□□□ -0.53
NEK4P2-201ENST00000580004 IGLV5-39A0A0G2JS06 123 aa11.71□□□□□ -0.53
NEK4P2-201ENST00000580004 ZNF22P17026 224 aaPredicted RBP11.71□□□□□ -0.53
NEK4P2-201ENST00000580004 C9orf116Q5BN46 136 aaPredicted RBP11.7□□□□□ -0.54
NEK4P2-201ENST00000580004 CHTOPQ9Y3Y2 248 aaKnown RBP11.7□□□□□ -0.54
NEK4P2-201ENST00000580004 SERF1AO75920 110 aa11.69□□□□□ -0.54
NEK4P2-201ENST00000580004 SPINK8P0C7L1 97 aa11.69□□□□□ -0.54
NEK4P2-201ENST00000580004 A0A1W2PNN7 141 aa11.68□□□□□ -0.54
NEK4P2-201ENST00000580004 LINC00310P59036 64 aa11.68□□□□□ -0.54
NEK4P2-201ENST00000580004 ODF1Q14990 250 aa11.68□□□□□ -0.54
NEK4P2-201ENST00000580004 SFTA2Q6UW10 78 aa11.68□□□□□ -0.54
NEK4P2-201ENST00000580004 FAM19A2Q8N3H0 131 aa11.68□□□□□ -0.54
NEK4P2-201ENST00000580004 PKHD1L1Q86WI1 4243 aa11.68□□□□□ -0.54
NEK4P2-201ENST00000580004 C11orf86A6NJI1 115 aa11.67□□□□□ -0.54
NEK4P2-201ENST00000580004 SCO1O75880 301 aa11.67□□□□□ -0.54
NEK4P2-201ENST00000580004 LEPROTL1O95214 131 aa11.67□□□□□ -0.54
NEK4P2-201ENST00000580004 GAGE2EQ4V326 116 aa11.67□□□□□ -0.54
NEK4P2-201ENST00000580004 GAGE2DQ9UEU5 116 aa11.67□□□□□ -0.54
NEK4P2-201ENST00000580004 PRR3P79522 188 aaKnown RBP11.66□□□□□ -0.54
NEK4P2-201ENST00000580004 HSPB8Q9UJY1 196 aa11.66□□□□□ -0.54
NEK4P2-201ENST00000580004 DMBT1Q9UGM3 2413 aaPredicted RBP11.66□□□□□ -0.54
NEK4P2-201ENST00000580004 TMEM170BQ5T4T1 132 aa11.65□□□□□ -0.54
NEK4P2-201ENST00000580004 KRTAP29-1A8MX34 341 aaPredicted RBP11.63□□□□□ -0.55
NEK4P2-201ENST00000580004 HIST1H2BKO60814 126 aa11.62□□□□□ -0.55
NEK4P2-201ENST00000580004 OXTP01178 125 aa11.62□□□□□ -0.55
NEK4P2-201ENST00000580004 HIST1H2BJP06899 126 aa11.62□□□□□ -0.55
NEK4P2-201ENST00000580004 HIST1H2BOP23527 126 aa11.62□□□□□ -0.55
NEK4P2-201ENST00000580004 HIST1H2BBP33778 126 aa11.62□□□□□ -0.55
NEK4P2-201ENST00000580004 HIST1H2BDP58876 126 aa11.62□□□□□ -0.55
NEK4P2-201ENST00000580004 HIST1H2BCP62807 126 aa11.62□□□□□ -0.55
NEK4P2-201ENST00000580004 HIST2H2BEQ16778 126 aa11.62□□□□□ -0.55
NEK4P2-201ENST00000580004 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.62□□□□□ -0.55
NEK4P2-201ENST00000580004 C9orf129Q5T035 196 aaKnown RBP11.62□□□□□ -0.55
NEK4P2-201ENST00000580004 HIST1H2BHQ93079 126 aa11.62□□□□□ -0.55
NEK4P2-201ENST00000580004 HIST1H2BNQ99877 126 aa11.62□□□□□ -0.55
NEK4P2-201ENST00000580004 HIST1H2BMQ99879 126 aa11.62□□□□□ -0.55
NEK4P2-201ENST00000580004 TMEM223A0PJW6 202 aa11.6□□□□□ -0.55
NEK4P2-201ENST00000580004 FAM168BA1KXE4 195 aa11.6□□□□□ -0.55
NEK4P2-201ENST00000580004 NUPR1O60356 82 aa11.6□□□□□ -0.55
NEK4P2-201ENST00000580004 S100A1P23297 94 aa11.6□□□□□ -0.55
NEK4P2-201ENST00000580004 HNRNPA3P51991 378 aaKnown RBP11.6□□□□□ -0.55
NEK4P2-201ENST00000580004 COX17Q14061 63 aa11.6□□□□□ -0.55
NEK4P2-201ENST00000580004 PLNP26678 52 aa11.59□□□□□ -0.55
NEK4P2-201ENST00000580004 PHF5AQ7RTV0 110 aaKnown RBP11.59□□□□□ -0.55
NEK4P2-201ENST00000580004 FAM19A5Q7Z5A7 132 aaPredicted RBP11.59□□□□□ -0.55
NEK4P2-201ENST00000580004 M0QXV9 152 aa11.58□□□□□ -0.56
NEK4P2-201ENST00000580004 KRTAP7-1Q8IUC3 87 aa11.57□□□□□ -0.56
NEK4P2-201ENST00000580004 PLA2G2DQ9UNK4 145 aa11.57□□□□□ -0.56
NEK4P2-201ENST00000580004 FABP4P15090 132 aa11.56□□□□□ -0.56
NEK4P2-201ENST00000580004 SPINK6Q6UWN8 80 aa11.56□□□□□ -0.56
NEK4P2-201ENST00000580004 FAT3Q8TDW7 4589 aa11.56□□□□□ -0.56
NEK4P2-201ENST00000580004 ZNF625Q96I27 306 aaPredicted RBP11.56□□□□□ -0.56
NEK4P2-201ENST00000580004 MAP1LC3CQ9BXW4 147 aa11.56□□□□□ -0.56
NEK4P2-201ENST00000580004 XAGE1AQ9HD64 81 aa11.56□□□□□ -0.56
NEK4P2-201ENST00000580004 TP73-AS1Q9UF72 201 aa11.56□□□□□ -0.56
NEK4P2-201ENST00000580004 LRP1Q07954 4544 aaKnown RBP11.56□□□□□ -0.56
NEK4P2-201ENST00000580004 PSORS1C2Q9UIG4 136 aa11.55□□□□□ -0.56
NEK4P2-201ENST00000580004 H0Y8G0 127 aa11.54□□□□□ -0.56
NEK4P2-201ENST00000580004 J3QL48 77 aa11.54□□□□□ -0.56
NEK4P2-201ENST00000580004 LBHQ53QV2 105 aaPredicted RBP11.54□□□□□ -0.56
NEK4P2-201ENST00000580004 COA6Q5JTJ3 125 aaKnown RBP11.54□□□□□ -0.56
NEK4P2-201ENST00000580004 ERG28Q9UKR5 140 aa11.54□□□□□ -0.56
NEK4P2-201ENST00000580004 DPM2O94777 84 aa11.53□□□□□ -0.56
NEK4P2-201ENST00000580004 HERC1Q15751 4861 aa11.52□□□□□ -0.56
NEK4P2-201ENST00000580004 SRSF9Q13242 221 aaKnown RBP eCLIP11.52□□□□□ -0.57
NEK4P2-201ENST00000580004 SERTAD4-AS1Q5TG53 156 aa11.52□□□□□ -0.57
NEK4P2-201ENST00000580004 C22orf24Q9Y442 160 aa11.52□□□□□ -0.57
NEK4P2-201ENST00000580004 PFN2P35080 140 aa11.51□□□□□ -0.57
NEK4P2-201ENST00000580004 HERV-K104P63124 156 aa11.51□□□□□ -0.57
NEK4P2-201ENST00000580004 UBE2BP63146 152 aa11.51□□□□□ -0.57
NEK4P2-201ENST00000580004 IGLV5-37A0A075B6J1 123 aa11.5□□□□□ -0.57
NEK4P2-201ENST00000580004 LINC00587B1AMM8 73 aa11.5□□□□□ -0.57
NEK4P2-201ENST00000580004 IGKCP01834 107 aa11.5□□□□□ -0.57
NEK4P2-201ENST00000580004 HERVK_113P61574 105 aa11.5□□□□□ -0.57
NEK4P2-201ENST00000580004 C1orf137Q5JT78 98 aa11.5□□□□□ -0.57
NEK4P2-201ENST00000580004 MRPL55Q7Z7F7 128 aaKnown RBP11.49□□□□□ -0.57
NEK4P2-201ENST00000580004 ATP6V1G1O75348 118 aa11.48□□□□□ -0.57
NEK4P2-201ENST00000580004 PLEKHB2Q96CS7 222 aa11.48□□□□□ -0.57
NEK4P2-201ENST00000580004 SYS1-DBNDD2H3BUS1 97 aa11.47□□□□□ -0.57
NEK4P2-201ENST00000580004 REG3GQ6UW15 175 aa11.47□□□□□ -0.57
NEK4P2-201ENST00000580004 SND1-IT1Q9HBX3 110 aa11.47□□□□□ -0.57
NEK4P2-201ENST00000580004 MYMXA0A1B0GTQ4 84 aa11.46□□□□□ -0.57
NEK4P2-201ENST00000580004 LEPROTO15243 131 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms