RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 TMEM223A0PJW6 202 aa10□□□□□ -0.81
SLC6A4-205ENST00000579221 CDK2AP2O75956 126 aa10□□□□□ -0.81
SLC6A4-205ENST00000579221 IGKCP01834 107 aa10□□□□□ -0.81
SLC6A4-205ENST00000579221 C3orf79P0CE67 100 aa10□□□□□ -0.81
SLC6A4-205ENST00000579221 KRTDAPP60985 99 aa10□□□□□ -0.81
SLC6A4-205ENST00000579221 C10orf25Q5T742 122 aa10□□□□□ -0.81
SLC6A4-205ENST00000579221 C2orf82Q6UX34 121 aa10□□□□□ -0.81
SLC6A4-205ENST00000579221 FAM30AQ9NZY2 134 aa10□□□□□ -0.81
SLC6A4-205ENST00000579221 TRBV30A0A0K0K1B3 111 aa9.99□□□□□ -0.81
SLC6A4-205ENST00000579221 SNRPEP62304 92 aaKnown RBP9.99□□□□□ -0.81
SLC6A4-205ENST00000579221 DPH3Q96FX2 82 aa9.99□□□□□ -0.81
SLC6A4-205ENST00000579221 Q6ZSA8 131 aa9.98□□□□□ -0.81
SLC6A4-205ENST00000579221 C6orf48Q9UBA6 75 aa9.98□□□□□ -0.81
SLC6A4-205ENST00000579221 LINC01545Q5VT33 79 aa9.97□□□□□ -0.81
SLC6A4-205ENST00000579221 HIST1H2BLQ99880 126 aa9.97□□□□□ -0.81
SLC6A4-205ENST00000579221 LINC00474Q9P2X8 69 aa9.97□□□□□ -0.81
SLC6A4-205ENST00000579221 C5orf52A6NGY3 159 aa9.96□□□□□ -0.82
SLC6A4-205ENST00000579221 XGP55808 180 aa9.96□□□□□ -0.82
SLC6A4-205ENST00000579221 C20orf202A1L168 122 aa9.95□□□□□ -0.82
SLC6A4-205ENST00000579221 TLX1NBP0CAT3 122 aa9.95□□□□□ -0.82
SLC6A4-205ENST00000579221 HERVK_113P61574 105 aa9.95□□□□□ -0.82
SLC6A4-205ENST00000579221 GAGE2BQ13066 116 aa9.95□□□□□ -0.82
SLC6A4-205ENST00000579221 IGKV2-24A0A0C4DH68 120 aa9.94□□□□□ -0.82
SLC6A4-205ENST00000579221 RPL18AQ02543 176 aaKnown RBP9.94□□□□□ -0.82
SLC6A4-205ENST00000579221 SFTA2Q6UW10 78 aa9.94□□□□□ -0.82
SLC6A4-205ENST00000579221 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.94□□□□□ -0.82
SLC6A4-205ENST00000579221 PKHD1P08F94 4074 aa9.93□□□□□ -0.82
SLC6A4-205ENST00000579221 A0A096LNI7 61 aa9.93□□□□□ -0.82
SLC6A4-205ENST00000579221 LEPROTO15243 131 aa9.93□□□□□ -0.82
SLC6A4-205ENST00000579221 CHTF8P0CG12 524 aa9.93□□□□□ -0.82
SLC6A4-205ENST00000579221 AKR1D1P51857 326 aa9.93□□□□□ -0.82
SLC6A4-205ENST00000579221 PTTG1IPP53801 180 aa9.93□□□□□ -0.82
SLC6A4-205ENST00000579221 CIRBPQ14011 172 aaKnown RBP9.93□□□□□ -0.82
SLC6A4-205ENST00000579221 MAJINQ3KP22 176 aa9.93□□□□□ -0.82
SLC6A4-205ENST00000579221 C9orf116Q5BN46 136 aaPredicted RBP9.93□□□□□ -0.82
SLC6A4-205ENST00000579221 PANO1I0J062 215 aa9.92□□□□□ -0.82
SLC6A4-205ENST00000579221 SPACA4Q8TDM5 124 aa9.92□□□□□ -0.82
SLC6A4-205ENST00000579221 PLEKHB2Q96CS7 222 aa9.92□□□□□ -0.82
SLC6A4-205ENST00000579221 BIRC6Q9NR09 4857 aa9.91□□□□□ -0.82
SLC6A4-205ENST00000579221 NDUFC2-KCTD14E9PQ53 114 aa9.91□□□□□ -0.82
SLC6A4-205ENST00000579221 HAMPP81172 84 aa9.91□□□□□ -0.82
SLC6A4-205ENST00000579221 Q6ZRP5 223 aa9.91□□□□□ -0.82
SLC6A4-205ENST00000579221 SCXQ7RTU7 201 aa9.91□□□□□ -0.82
SLC6A4-205ENST00000579221 CIRBP-AS1Q8TBR5 109 aa9.91□□□□□ -0.82
SLC6A4-205ENST00000579221 DYNC1H1Q14204 4646 aaKnown RBP9.91□□□□□ -0.82
SLC6A4-205ENST00000579221 DNAH5Q8TE73 4624 aa9.9□□□□□ -0.83
SLC6A4-205ENST00000579221 A0A087WYN8 130 aa9.89□□□□□ -0.83
SLC6A4-205ENST00000579221 GAGE2EQ4V326 116 aa9.89□□□□□ -0.83
SLC6A4-205ENST00000579221 STPG4Q8N801 248 aa9.89□□□□□ -0.83
SLC6A4-205ENST00000579221 ZNF625Q96I27 306 aaPredicted RBP9.89□□□□□ -0.83
SLC6A4-205ENST00000579221 GAGE2DQ9UEU5 116 aa9.89□□□□□ -0.83
SLC6A4-205ENST00000579221 MYMXA0A1B0GTQ4 84 aa9.88□□□□□ -0.83
SLC6A4-205ENST00000579221 E9PLD3 99 aa9.88□□□□□ -0.83
SLC6A4-205ENST00000579221 J3QQQ9 107 aa9.88□□□□□ -0.83
SLC6A4-205ENST00000579221 NDUFA12Q9UI09 145 aa9.88□□□□□ -0.83
SLC6A4-205ENST00000579221 LGALS3P17931 250 aaKnown RBP9.87□□□□□ -0.83
SLC6A4-205ENST00000579221 HERV-K104P63124 156 aa9.87□□□□□ -0.83
SLC6A4-205ENST00000579221 PLAC8Q9NZF1 115 aa9.87□□□□□ -0.83
SLC6A4-205ENST00000579221 ERG28Q9UKR5 140 aa9.87□□□□□ -0.83
SLC6A4-205ENST00000579221 TMA7Q9Y2S6 64 aaKnown RBP9.87□□□□□ -0.83
SLC6A4-205ENST00000579221 PFN2P35080 140 aa9.86□□□□□ -0.83
SLC6A4-205ENST00000579221 COX17Q14061 63 aa9.86□□□□□ -0.83
SLC6A4-205ENST00000579221 LRP1BQ9NZR2 4599 aa9.85□□□□□ -0.83
SLC6A4-205ENST00000579221 LINC00587B1AMM8 73 aa9.85□□□□□ -0.83
SLC6A4-205ENST00000579221 SMR3BP02814 79 aaPredicted RBP9.85□□□□□ -0.83
SLC6A4-205ENST00000579221 NMUP48645 174 aa9.85□□□□□ -0.83
SLC6A4-205ENST00000579221 TSPEAR-AS2P59090 65 aa9.84□□□□□ -0.83
SLC6A4-205ENST00000579221 ATOH7Q8N100 152 aa9.84□□□□□ -0.83
SLC6A4-205ENST00000579221 A0A1W2PNN7 141 aa9.83□□□□□ -0.84
SLC6A4-205ENST00000579221 SCGB1D1O95968 90 aa9.83□□□□□ -0.84
SLC6A4-205ENST00000579221 LINC00158P58513 81 aa9.83□□□□□ -0.84
SLC6A4-205ENST00000579221 MEIG1Q5JSS6 88 aa9.83□□□□□ -0.84
SLC6A4-205ENST00000579221 FAM229AH3BQW9 127 aa9.82□□□□□ -0.84
SLC6A4-205ENST00000579221 C9orf129Q5T035 196 aaKnown RBP9.82□□□□□ -0.84
SLC6A4-205ENST00000579221 Q8N1X5 172 aa9.82□□□□□ -0.84
SLC6A4-205ENST00000579221 XAGE1AQ9HD64 81 aa9.82□□□□□ -0.84
SLC6A4-205ENST00000579221 EPM2AB3EWF7 344 aa9.81□□□□□ -0.84
SLC6A4-205ENST00000579221 HSBP1L1C9JCN9 74 aa9.8□□□□□ -0.84
SLC6A4-205ENST00000579221 SMIM13P0DJ93 91 aa9.8□□□□□ -0.84
SLC6A4-205ENST00000579221 LINC00528Q8N1L1 170 aa9.8□□□□□ -0.84
SLC6A4-205ENST00000579221 IGKV2D-26A0A0A0MRZ7 120 aa9.79□□□□□ -0.84
SLC6A4-205ENST00000579221 A0A0U1RRA0 63 aa9.79□□□□□ -0.84
SLC6A4-205ENST00000579221 FAM168BA1KXE4 195 aa9.79□□□□□ -0.84
SLC6A4-205ENST00000579221 C7orf33Q8WU49 177 aa9.79□□□□□ -0.84
SLC6A4-205ENST00000579221 ANKRD39Q53RE8 183 aa9.78□□□□□ -0.84
SLC6A4-205ENST00000579221 FAM19A5Q7Z5A7 132 aaPredicted RBP9.78□□□□□ -0.84
SLC6A4-205ENST00000579221 SND1-IT1Q9HBX3 110 aa9.78□□□□□ -0.84
SLC6A4-205ENST00000579221 ZNF815PA8K554 130 aa9.77□□□□□ -0.85
SLC6A4-205ENST00000579221 PLA2G2DQ9UNK4 145 aa9.77□□□□□ -0.85
SLC6A4-205ENST00000579221 DNAH8Q96JB1 4490 aa9.76□□□□□ -0.85
SLC6A4-205ENST00000579221 KIAA1109Q2LD37 5005 aa9.76□□□□□ -0.85
SLC6A4-205ENST00000579221 A0A0J9YXY3 114 aa9.76□□□□□ -0.85
SLC6A4-205ENST00000579221 PLA2G1BP04054 148 aaKnown RBP9.76□□□□□ -0.85
SLC6A4-205ENST00000579221 JOSD1Q15040 202 aaPredicted RBP9.75□□□□□ -0.85
SLC6A4-205ENST00000579221 Q5VSD8 79 aa9.75□□□□□ -0.85
SLC6A4-205ENST00000579221 PHF5AQ7RTV0 110 aaKnown RBP9.75□□□□□ -0.85
SLC6A4-205ENST00000579221 MIR7-3HGQ8N6C7 128 aa9.75□□□□□ -0.85
SLC6A4-205ENST00000579221 KRTAP17-1Q9BYP8 105 aa9.75□□□□□ -0.85
SLC6A4-205ENST00000579221 APOBP04114 4563 aaKnown RBP9.74□□□□□ -0.85
SLC6A4-205ENST00000579221 RYR1P21817 5038 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms