RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 C16orf90A8MZG2 172 aa8.99□□□□□ -0.97
LINC01543-201ENST00000578367 TOMM7Q9P0U1 55 aa8.99□□□□□ -0.97
LINC01543-201ENST00000578367 PLEKHB2Q96CS7 222 aa8.98□□□□□ -0.97
LINC01543-201ENST00000578367 PMCHL2Q9BQD1 86 aa8.98□□□□□ -0.97
LINC01543-201ENST00000578367 Q6ZRU5 148 aa8.97□□□□□ -0.97
LINC01543-201ENST00000578367 E9PLD3 99 aa8.96□□□□□ -0.98
LINC01543-201ENST00000578367 LEPROTO15243 131 aa8.96□□□□□ -0.98
LINC01543-201ENST00000578367 TLX1NBP0CAT3 122 aa8.96□□□□□ -0.98
LINC01543-201ENST00000578367 SDIM1Q6ZPB5 146 aa8.96□□□□□ -0.98
LINC01543-201ENST00000578367 LINC00526Q96FQ7 95 aa8.96□□□□□ -0.98
LINC01543-201ENST00000578367 LINC00474Q9P2X8 69 aa8.96□□□□□ -0.98
LINC01543-201ENST00000578367 TMA7Q9Y2S6 64 aaKnown RBP8.96□□□□□ -0.98
LINC01543-201ENST00000578367 NMUP48645 174 aa8.95□□□□□ -0.98
LINC01543-201ENST00000578367 UNQ6190/PRO20217Q6UXQ8 127 aa8.95□□□□□ -0.98
LINC01543-201ENST00000578367 DNAH5Q8TE73 4624 aa8.95□□□□□ -0.98
LINC01543-201ENST00000578367 LOC107984640A0A0U1RRK4 108 aa8.94□□□□□ -0.98
LINC01543-201ENST00000578367 LINC00587B1AMM8 73 aa8.94□□□□□ -0.98
LINC01543-201ENST00000578367 HERV-K104P63124 156 aa8.94□□□□□ -0.98
LINC01543-201ENST00000578367 COX17Q14061 63 aa8.93□□□□□ -0.98
LINC01543-201ENST00000578367 C2orf82Q6UX34 121 aa8.93□□□□□ -0.98
LINC01543-201ENST00000578367 Q6ZSA8 131 aa8.93□□□□□ -0.98
LINC01543-201ENST00000578367 ZNF625Q96I27 306 aaPredicted RBP8.93□□□□□ -0.98
LINC01543-201ENST00000578367 C6orf48Q9UBA6 75 aa8.93□□□□□ -0.98
LINC01543-201ENST00000578367 DYNC1H1Q14204 4646 aaKnown RBP8.93□□□□□ -0.98
LINC01543-201ENST00000578367 MYMXA0A1B0GTQ4 84 aa8.92□□□□□ -0.98
LINC01543-201ENST00000578367 NDUFC2-KCTD14E9PQ53 114 aa8.92□□□□□ -0.98
LINC01543-201ENST00000578367 J3QQQ9 107 aa8.92□□□□□ -0.98
LINC01543-201ENST00000578367 CIRBPQ14011 172 aaKnown RBP8.92□□□□□ -0.98
LINC01543-201ENST00000578367 C10orf25Q5T742 122 aa8.92□□□□□ -0.98
LINC01543-201ENST00000578367 KRTAP10-1P60331 282 aa8.91□□□□□ -0.98
LINC01543-201ENST00000578367 NDUFA12Q9UI09 145 aa8.91□□□□□ -0.98
LINC01543-201ENST00000578367 LRP1BQ9NZR2 4599 aa8.91□□□□□ -0.98
LINC01543-201ENST00000578367 PKHD1P08F94 4074 aa8.9□□□□□ -0.98
LINC01543-201ENST00000578367 EPPK1P58107 5090 aaKnown RBP8.9□□□□□ -0.98
LINC01543-201ENST00000578367 HSBP1L1C9JCN9 74 aa8.9□□□□□ -0.98
LINC01543-201ENST00000578367 SCGB1D1O95968 90 aa8.9□□□□□ -0.98
LINC01543-201ENST00000578367 LGALS3P17931 250 aaKnown RBP8.9□□□□□ -0.98
LINC01543-201ENST00000578367 JOSD1Q15040 202 aaPredicted RBP8.9□□□□□ -0.98
LINC01543-201ENST00000578367 FUSP35637 526 aaKnown RBP eCLIP8.89□□□□□ -0.99
LINC01543-201ENST00000578367 STPG4Q8N801 248 aa8.89□□□□□ -0.99
LINC01543-201ENST00000578367 CDK2AP2O75956 126 aa8.88□□□□□ -0.99
LINC01543-201ENST00000578367 PTTG1IPP53801 180 aa8.88□□□□□ -0.99
LINC01543-201ENST00000578367 LINC01620Q4KN68 170 aa8.87□□□□□ -0.99
LINC01543-201ENST00000578367 SPACA4Q8TDM5 124 aa8.87□□□□□ -0.99
LINC01543-201ENST00000578367 ERG28Q9UKR5 140 aa8.87□□□□□ -0.99
LINC01543-201ENST00000578367 TSPEAR-AS2P59090 65 aa8.86□□□□□ -0.99
LINC01543-201ENST00000578367 RPL18AQ02543 176 aaKnown RBP8.86□□□□□ -0.99
LINC01543-201ENST00000578367 Q6ZRP5 223 aa8.86□□□□□ -0.99
LINC01543-201ENST00000578367 ATOH7Q8N100 152 aa8.86□□□□□ -0.99
LINC01543-201ENST00000578367 DNAH8Q96JB1 4490 aa8.86□□□□□ -0.99
LINC01543-201ENST00000578367 A0A096LNI7 61 aa8.85□□□□□ -0.99
LINC01543-201ENST00000578367 C9orf116Q5BN46 136 aaPredicted RBP8.85□□□□□ -0.99
LINC01543-201ENST00000578367 GAGE2BQ13066 116 aa8.84□□□□□ -0.99
LINC01543-201ENST00000578367 IGKV2D-26A0A0A0MRZ7 120 aa8.83□□□□□ -1
LINC01543-201ENST00000578367 EPM2AB3EWF7 344 aa8.83□□□□□ -1
LINC01543-201ENST00000578367 TIMM17BO60830 172 aa8.83□□□□□ -1
LINC01543-201ENST00000578367 ANKRD39Q53RE8 183 aa8.83□□□□□ -1
LINC01543-201ENST00000578367 MEIG1Q5JSS6 88 aa8.83□□□□□ -1
LINC01543-201ENST00000578367 PLAC8Q9NZF1 115 aa8.83□□□□□ -1
LINC01543-201ENST00000578367 FAM30AQ9NZY2 134 aa8.83□□□□□ -1
LINC01543-201ENST00000578367 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.83□□□□□ -1
LINC01543-201ENST00000578367 IGKV2-24A0A0C4DH68 120 aa8.82□□□□□ -1
LINC01543-201ENST00000578367 ZNF815PA8K554 130 aa8.82□□□□□ -1
LINC01543-201ENST00000578367 MAJINQ3KP22 176 aa8.82□□□□□ -1
LINC01543-201ENST00000578367 DPH3Q96FX2 82 aa8.82□□□□□ -1
LINC01543-201ENST00000578367 BIRC6Q9NR09 4857 aa8.81□□□□□ -1
LINC01543-201ENST00000578367 PFN2P35080 140 aa8.81□□□□□ -1
LINC01543-201ENST00000578367 LINC00158P58513 81 aa8.81□□□□□ -1
LINC01543-201ENST00000578367 GAGE2EQ4V326 116 aa8.81□□□□□ -1
LINC01543-201ENST00000578367 PYY3Q5JQD4 70 aa8.81□□□□□ -1
LINC01543-201ENST00000578367 GAGE2DQ9UEU5 116 aa8.81□□□□□ -1
LINC01543-201ENST00000578367 PLA2G2DQ9UNK4 145 aa8.81□□□□□ -1
LINC01543-201ENST00000578367 A0A0J9YXY3 114 aa8.8□□□□□ -1
LINC01543-201ENST00000578367 PANO1I0J062 215 aa8.8□□□□□ -1
LINC01543-201ENST00000578367 XGP55808 180 aa8.8□□□□□ -1
LINC01543-201ENST00000578367 VAMP8Q9BV40 100 aa8.8□□□□□ -1
LINC01543-201ENST00000578367 A0A087WYN8 130 aa8.79□□□□□ -1
LINC01543-201ENST00000578367 LOC107984156A0A0G2JMH3 177 aa8.79□□□□□ -1
LINC01543-201ENST00000578367 CHTF8P0CG12 524 aa8.79□□□□□ -1
LINC01543-201ENST00000578367 SMIM13P0DJ93 91 aa8.79□□□□□ -1
LINC01543-201ENST00000578367 SCXQ7RTU7 201 aa8.79□□□□□ -1
LINC01543-201ENST00000578367 ARL17AQ8IVW1 177 aa8.79□□□□□ -1
LINC01543-201ENST00000578367 CIRBP-AS1Q8TBR5 109 aa8.79□□□□□ -1
LINC01543-201ENST00000578367 DLEU1O43261 78 aa8.78□□□□□ -1
LINC01543-201ENST00000578367 C9orf129Q5T035 196 aaKnown RBP8.78□□□□□ -1
LINC01543-201ENST00000578367 Q6ZVH6 145 aa8.78□□□□□ -1
LINC01543-201ENST00000578367 SND1-IT1Q9HBX3 110 aa8.78□□□□□ -1
LINC01543-201ENST00000578367 APOBP04114 4563 aaKnown RBP8.77□□□□□ -1.01
LINC01543-201ENST00000578367 RPL24P83731 157 aaKnown RBP8.77□□□□□ -1.01
LINC01543-201ENST00000578367 SCGB1D4Q6XE38 83 aa8.77□□□□□ -1.01
LINC01543-201ENST00000578367 MIR7-3HGQ8N6C7 128 aa8.77□□□□□ -1.01
LINC01543-201ENST00000578367 COPS9Q8WXC6 57 aa8.77□□□□□ -1.01
LINC01543-201ENST00000578367 IGLV5-37A0A075B6J1 123 aa8.76□□□□□ -1.01
LINC01543-201ENST00000578367 TMEM238C9JI98 176 aa8.76□□□□□ -1.01
LINC01543-201ENST00000578367 COX8AP10176 69 aa8.76□□□□□ -1.01
LINC01543-201ENST00000578367 PCP2Q8IVA1 136 aa8.76□□□□□ -1.01
LINC01543-201ENST00000578367 PPDPFQ9H3Y8 114 aa8.76□□□□□ -1.01
LINC01543-201ENST00000578367 XAGE1AQ9HD64 81 aa8.76□□□□□ -1.01
LINC01543-201ENST00000578367 TP73-AS1Q9UF72 201 aa8.76□□□□□ -1.01
LINC01543-201ENST00000578367 A0A1W2PNN7 141 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms