RNA–Protein interactions for RNA: ENST00000577396.5

SUPT4H1-202, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-202ENST00000577396 C6orf226Q5I0X4 101 aa12.76□□□□□ -0.37
SUPT4H1-202ENST00000577396 C6orf48Q9UBA6 75 aa12.76□□□□□ -0.37
SUPT4H1-202ENST00000577396 IGLV5-39A0A0G2JS06 123 aa12.75□□□□□ -0.37
SUPT4H1-202ENST00000577396 PRSS2P07478 247 aa12.75□□□□□ -0.37
SUPT4H1-202ENST00000577396 CHTF8P0CG12 524 aa12.75□□□□□ -0.37
SUPT4H1-202ENST00000577396 SCXQ7RTU7 201 aa12.75□□□□□ -0.37
SUPT4H1-202ENST00000577396 CIRBP-AS1Q8TBR5 109 aa12.75□□□□□ -0.37
SUPT4H1-202ENST00000577396 H0Y8G0 127 aa12.73□□□□□ -0.37
SUPT4H1-202ENST00000577396 SPACA4Q8TDM5 124 aa12.73□□□□□ -0.37
SUPT4H1-202ENST00000577396 A0A096LNI7 61 aa12.73□□□□□ -0.37
SUPT4H1-202ENST00000577396 TMEM170BQ5T4T1 132 aa12.73□□□□□ -0.37
SUPT4H1-202ENST00000577396 COX7B2Q8TF08 81 aa12.73□□□□□ -0.37
SUPT4H1-202ENST00000577396 CKS1BP61024 79 aa12.72□□□□□ -0.37
SUPT4H1-202ENST00000577396 MAP1LC3CQ9BXW4 147 aa12.72□□□□□ -0.37
SUPT4H1-202ENST00000577396 TRBV30A0A0K0K1B3 111 aa12.71□□□□□ -0.37
SUPT4H1-202ENST00000577396 LOC107984640A0A0U1RRK4 108 aa12.71□□□□□ -0.37
SUPT4H1-202ENST00000577396 PKIGQ9Y2B9 76 aa12.7□□□□□ -0.38
SUPT4H1-202ENST00000577396 IGKV2-24A0A0C4DH68 120 aa12.7□□□□□ -0.38
SUPT4H1-202ENST00000577396 TMEM223A0PJW6 202 aa12.7□□□□□ -0.38
SUPT4H1-202ENST00000577396 TLX1NBP0CAT3 122 aa12.7□□□□□ -0.38
SUPT4H1-202ENST00000577396 Q8N1X5 172 aa12.7□□□□□ -0.38
SUPT4H1-202ENST00000577396 SMR3BP02814 79 aaPredicted RBP12.69□□□□□ -0.38
SUPT4H1-202ENST00000577396 CXCL5P42830 114 aa12.69□□□□□ -0.38
SUPT4H1-202ENST00000577396 PTTG1IPP53801 180 aa12.69□□□□□ -0.38
SUPT4H1-202ENST00000577396 C9orf116Q5BN46 136 aaPredicted RBP12.69□□□□□ -0.38
SUPT4H1-202ENST00000577396 A0A087WYN8 130 aa12.68□□□□□ -0.38
SUPT4H1-202ENST00000577396 SYS1-DBNDD2H3BUS1 97 aa12.68□□□□□ -0.38
SUPT4H1-202ENST00000577396 PMCHL2Q9BQD1 86 aa12.68□□□□□ -0.38
SUPT4H1-202ENST00000577396 LINC00474Q9P2X8 69 aa12.68□□□□□ -0.38
SUPT4H1-202ENST00000577396 MAJINQ3KP22 176 aa12.67□□□□□ -0.38
SUPT4H1-202ENST00000577396 Q6ZRP5 223 aa12.67□□□□□ -0.38
SUPT4H1-202ENST00000577396 DPH3Q96FX2 82 aa12.67□□□□□ -0.38
SUPT4H1-202ENST00000577396 PLNP26678 52 aa12.66□□□□□ -0.38
SUPT4H1-202ENST00000577396 GAGE2BQ13066 116 aa12.66□□□□□ -0.38
SUPT4H1-202ENST00000577396 PLAC8Q9NZF1 115 aa12.66□□□□□ -0.38
SUPT4H1-202ENST00000577396 NDUFC2-KCTD14E9PQ53 114 aa12.65□□□□□ -0.38
SUPT4H1-202ENST00000577396 DPM2O94777 84 aa12.65□□□□□ -0.38
SUPT4H1-202ENST00000577396 KRTAP4-5Q9BYR2 181 aa12.65□□□□□ -0.38
SUPT4H1-202ENST00000577396 C3orf79P0CE67 100 aa12.64□□□□□ -0.39
SUPT4H1-202ENST00000577396 RPL18AQ02543 176 aaKnown RBP12.64□□□□□ -0.39
SUPT4H1-202ENST00000577396 ABCA13Q86UQ4 5058 aa12.64□□□□□ -0.39
SUPT4H1-202ENST00000577396 EPM2AB3EWF7 344 aa12.63□□□□□ -0.39
SUPT4H1-202ENST00000577396 LINC01545Q5VT33 79 aa12.63□□□□□ -0.39
SUPT4H1-202ENST00000577396 PET117Q6UWS5 81 aa12.63□□□□□ -0.39
SUPT4H1-202ENST00000577396 HIST3H2BBQ8N257 126 aa12.63□□□□□ -0.39
SUPT4H1-202ENST00000577396 STPG4Q8N801 248 aa12.63□□□□□ -0.39
SUPT4H1-202ENST00000577396 VPS13BQ7Z7G8 4022 aa12.63□□□□□ -0.39
SUPT4H1-202ENST00000577396 IGKCP01834 107 aa12.62□□□□□ -0.39
SUPT4H1-202ENST00000577396 A0A1W2PNN7 141 aa12.6□□□□□ -0.39
SUPT4H1-202ENST00000577396 ZNF625Q96I27 306 aaPredicted RBP12.6□□□□□ -0.39
SUPT4H1-202ENST00000577396 SRRM2Q9UQ35 2752 aaKnown RBP12.6□□□□□ -0.39
SUPT4H1-202ENST00000577396 S100A6P06703 90 aa12.59□□□□□ -0.39
SUPT4H1-202ENST00000577396 GAGE2EQ4V326 116 aa12.59□□□□□ -0.39
SUPT4H1-202ENST00000577396 GAGE2DQ9UEU5 116 aa12.59□□□□□ -0.39
SUPT4H1-202ENST00000577396 KRTDAPP60985 99 aa12.59□□□□□ -0.39
SUPT4H1-202ENST00000577396 LINC00528Q8N1L1 170 aa12.59□□□□□ -0.39
SUPT4H1-202ENST00000577396 HIST1H2BLQ99880 126 aa12.59□□□□□ -0.39
SUPT4H1-202ENST00000577396 FAM229AH3BQW9 127 aa12.57□□□□□ -0.4
SUPT4H1-202ENST00000577396 SNRPEP62304 92 aaKnown RBP12.57□□□□□ -0.4
SUPT4H1-202ENST00000577396 C9orf129Q5T035 196 aaKnown RBP12.57□□□□□ -0.4
SUPT4H1-202ENST00000577396 Q5VSD8 79 aa12.57□□□□□ -0.4
SUPT4H1-202ENST00000577396 C5orf52A6NGY3 159 aa12.56□□□□□ -0.4
SUPT4H1-202ENST00000577396 SFTA2Q6UW10 78 aa12.56□□□□□ -0.4
SUPT4H1-202ENST00000577396 PCLOQ9Y6V0 5065 aa12.56□□□□□ -0.4
SUPT4H1-202ENST00000577396 KRTAP7-1Q8IUC3 87 aa12.55□□□□□ -0.4
SUPT4H1-202ENST00000577396 FAM168BA1KXE4 195 aa12.55□□□□□ -0.4
SUPT4H1-202ENST00000577396 LEPROTO15243 131 aa12.55□□□□□ -0.4
SUPT4H1-202ENST00000577396 S100A2P29034 98 aa12.55□□□□□ -0.4
SUPT4H1-202ENST00000577396 TSPEAR-AS2P59090 65 aa12.55□□□□□ -0.4
SUPT4H1-202ENST00000577396 TMA7Q9Y2S6 64 aaKnown RBP12.55□□□□□ -0.4
SUPT4H1-202ENST00000577396 KRTAP10-4P60372 401 aaPredicted RBP12.53□□□□□ -0.4
SUPT4H1-202ENST00000577396 XAGE1AQ9HD64 81 aa12.53□□□□□ -0.4
SUPT4H1-202ENST00000577396 ERG28Q9UKR5 140 aa12.53□□□□□ -0.4
SUPT4H1-202ENST00000577396 HERVK_113P61574 105 aa12.52□□□□□ -0.4
SUPT4H1-202ENST00000577396 PLEKHB2Q96CS7 222 aa12.52□□□□□ -0.4
SUPT4H1-202ENST00000577396 J3QQQ9 107 aa12.51□□□□□ -0.41
SUPT4H1-202ENST00000577396 PFN2P35080 140 aa12.51□□□□□ -0.41
SUPT4H1-202ENST00000577396 COX17Q14061 63 aa12.51□□□□□ -0.41
SUPT4H1-202ENST00000577396 NDUFA12Q9UI09 145 aa12.51□□□□□ -0.41
SUPT4H1-202ENST00000577396 E9PLD3 99 aa12.51□□□□□ -0.41
SUPT4H1-202ENST00000577396 PLA2G1BP04054 148 aaKnown RBP12.48□□□□□ -0.41
SUPT4H1-202ENST00000577396 HERV-K104P63124 156 aa12.48□□□□□ -0.41
SUPT4H1-202ENST00000577396 MYMXA0A1B0GTQ4 84 aa12.48□□□□□ -0.41
SUPT4H1-202ENST00000577396 C20orf202A1L168 122 aa12.48□□□□□ -0.41
SUPT4H1-202ENST00000577396 SERTAD4-AS1Q5TG53 156 aa12.47□□□□□ -0.41
SUPT4H1-202ENST00000577396 PHF5AQ7RTV0 110 aaKnown RBP12.47□□□□□ -0.41
SUPT4H1-202ENST00000577396 FAM19A5Q7Z5A7 132 aaPredicted RBP12.47□□□□□ -0.41
SUPT4H1-202ENST00000577396 RPL37AP61513 92 aaKnown RBP12.46□□□□□ -0.41
SUPT4H1-202ENST00000577396 C7orf33Q8WU49 177 aa12.46□□□□□ -0.41
SUPT4H1-202ENST00000577396 NMUP48645 174 aa12.45□□□□□ -0.42
SUPT4H1-202ENST00000577396 SND1-IT1Q9HBX3 110 aa12.45□□□□□ -0.42
SUPT4H1-202ENST00000577396 IGKV2D-26A0A0A0MRZ7 120 aa12.44□□□□□ -0.42
SUPT4H1-202ENST00000577396 SMIM13P0DJ93 91 aa12.44□□□□□ -0.42
SUPT4H1-202ENST00000577396 LGALS3P17931 250 aaKnown RBP12.44□□□□□ -0.42
SUPT4H1-202ENST00000577396 PLA2G2DQ9UNK4 145 aa12.44□□□□□ -0.42
SUPT4H1-202ENST00000577396 LINC00158P58513 81 aa12.44□□□□□ -0.42
SUPT4H1-202ENST00000577396 ATOH7Q8N100 152 aa12.44□□□□□ -0.42
SUPT4H1-202ENST00000577396 AKR1D1P51857 326 aa12.43□□□□□ -0.42
SUPT4H1-202ENST00000577396 A0A0U1RRA0 63 aa12.42□□□□□ -0.42
SUPT4H1-202ENST00000577396 C22orf24Q9Y442 160 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms