RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 PTTG1IPP53801 180 aa9.68□□□□□ -0.86
LITAF-217ENST00000575426 C10orf25Q5T742 122 aa9.68□□□□□ -0.86
LITAF-217ENST00000575426 C2orf82Q6UX34 121 aa9.68□□□□□ -0.86
LITAF-217ENST00000575426 STPG4Q8N801 248 aa9.68□□□□□ -0.86
LITAF-217ENST00000575426 KRTAP17-1Q9BYP8 105 aa9.68□□□□□ -0.86
LITAF-217ENST00000575426 HSPB8Q9UJY1 196 aa9.68□□□□□ -0.86
LITAF-217ENST00000575426 HSPG2P98160 4391 aa9.67□□□□□ -0.86
LITAF-217ENST00000575426 HIST1H2BKO60814 126 aa9.67□□□□□ -0.86
LITAF-217ENST00000575426 HIST1H2BJP06899 126 aa9.67□□□□□ -0.86
LITAF-217ENST00000575426 HIST1H2BOP23527 126 aa9.67□□□□□ -0.86
LITAF-217ENST00000575426 HIST1H2BBP33778 126 aa9.67□□□□□ -0.86
LITAF-217ENST00000575426 CXCL5P42830 114 aa9.67□□□□□ -0.86
LITAF-217ENST00000575426 HIST1H2BDP58876 126 aa9.67□□□□□ -0.86
LITAF-217ENST00000575426 LINC00310P59036 64 aa9.67□□□□□ -0.86
LITAF-217ENST00000575426 HIST1H2BCP62807 126 aa9.67□□□□□ -0.86
LITAF-217ENST00000575426 HIST2H2BEQ16778 126 aa9.67□□□□□ -0.86
LITAF-217ENST00000575426 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.67□□□□□ -0.86
LITAF-217ENST00000575426 COX7B2Q8TF08 81 aa9.67□□□□□ -0.86
LITAF-217ENST00000575426 HIST1H2BHQ93079 126 aa9.67□□□□□ -0.86
LITAF-217ENST00000575426 HIST1H2BNQ99877 126 aa9.67□□□□□ -0.86
LITAF-217ENST00000575426 HIST1H2BMQ99879 126 aa9.67□□□□□ -0.86
LITAF-217ENST00000575426 C6orf48Q9UBA6 75 aa9.67□□□□□ -0.86
LITAF-217ENST00000575426 NUPR1O60356 82 aa9.66□□□□□ -0.86
LITAF-217ENST00000575426 FABP4P15090 132 aa9.66□□□□□ -0.86
LITAF-217ENST00000575426 ZNF22P17026 224 aaPredicted RBP9.66□□□□□ -0.86
LITAF-217ENST00000575426 TMEM170BQ5T4T1 132 aa9.66□□□□□ -0.86
LITAF-217ENST00000575426 KRTAP4-5Q9BYR2 181 aa9.66□□□□□ -0.86
LITAF-217ENST00000575426 H0Y8G0 127 aa9.65□□□□□ -0.86
LITAF-217ENST00000575426 PLAC8Q9NZF1 115 aa9.65□□□□□ -0.86
LITAF-217ENST00000575426 C11orf86A6NJI1 115 aa9.64□□□□□ -0.87
LITAF-217ENST00000575426 F8VRH5 84 aa9.64□□□□□ -0.87
LITAF-217ENST00000575426 TLX1NBP0CAT3 122 aa9.64□□□□□ -0.87
LITAF-217ENST00000575426 DNAH8Q96JB1 4490 aa9.64□□□□□ -0.87
LITAF-217ENST00000575426 C7orf33Q8WU49 177 aa9.63□□□□□ -0.87
LITAF-217ENST00000575426 GAGE2EQ4V326 116 aa9.62□□□□□ -0.87
LITAF-217ENST00000575426 C9orf116Q5BN46 136 aaPredicted RBP9.62□□□□□ -0.87
LITAF-217ENST00000575426 GAGE2DQ9UEU5 116 aa9.62□□□□□ -0.87
LITAF-217ENST00000575426 NDUFC2-KCTD14E9PQ53 114 aa9.61□□□□□ -0.87
LITAF-217ENST00000575426 Q6ZRP5 223 aa9.61□□□□□ -0.87
LITAF-217ENST00000575426 MAP1LC3CQ9BXW4 147 aa9.61□□□□□ -0.87
LITAF-217ENST00000575426 IGLV5-39A0A0G2JS06 123 aa9.6□□□□□ -0.87
LITAF-217ENST00000575426 INAFM2P0DMQ5 153 aa9.6□□□□□ -0.87
LITAF-217ENST00000575426 RPL37AP61513 92 aaKnown RBP9.6□□□□□ -0.87
LITAF-217ENST00000575426 ODF1Q14990 250 aa9.59□□□□□ -0.87
LITAF-217ENST00000575426 TMEM223A0PJW6 202 aa9.58□□□□□ -0.88
LITAF-217ENST00000575426 A0A1W2PNN7 141 aa9.57□□□□□ -0.88
LITAF-217ENST00000575426 PLNP26678 52 aa9.57□□□□□ -0.88
LITAF-217ENST00000575426 SFTA2Q6UW10 78 aa9.57□□□□□ -0.88
LITAF-217ENST00000575426 DPM2O94777 84 aa9.56□□□□□ -0.88
LITAF-217ENST00000575426 COA6Q5JTJ3 125 aaKnown RBP9.56□□□□□ -0.88
LITAF-217ENST00000575426 SRRM2Q9UQ35 2752 aaKnown RBP9.56□□□□□ -0.88
LITAF-217ENST00000575426 IGKCP01834 107 aa9.54□□□□□ -0.88
LITAF-217ENST00000575426 FAM19A5Q7Z5A7 132 aaPredicted RBP9.54□□□□□ -0.88
LITAF-217ENST00000575426 HERVK_113P61574 105 aa9.53□□□□□ -0.88
LITAF-217ENST00000575426 PMCHL2Q9BQD1 86 aa9.53□□□□□ -0.88
LITAF-217ENST00000575426 FAM168BA1KXE4 195 aa9.52□□□□□ -0.89
LITAF-217ENST00000575426 SYS1-DBNDD2H3BUS1 97 aa9.52□□□□□ -0.89
LITAF-217ENST00000575426 PFN2P35080 140 aa9.52□□□□□ -0.89
LITAF-217ENST00000575426 C9orf129Q5T035 196 aaKnown RBP9.52□□□□□ -0.89
LITAF-217ENST00000575426 ZNF625Q96I27 306 aaPredicted RBP9.52□□□□□ -0.89
LITAF-217ENST00000575426 XAGE1AQ9HD64 81 aa9.52□□□□□ -0.89
LITAF-217ENST00000575426 COX17Q14061 63 aa9.51□□□□□ -0.89
LITAF-217ENST00000575426 PET117Q6UWS5 81 aa9.51□□□□□ -0.89
LITAF-217ENST00000575426 PHF5AQ7RTV0 110 aaKnown RBP9.51□□□□□ -0.89
LITAF-217ENST00000575426 ERG28Q9UKR5 140 aa9.51□□□□□ -0.89
LITAF-217ENST00000575426 LEPROTO15243 131 aa9.5□□□□□ -0.89
LITAF-217ENST00000575426 PLEKHB2Q96CS7 222 aa9.5□□□□□ -0.89
LITAF-217ENST00000575426 FAT1Q14517 4588 aa9.49□□□□□ -0.89
LITAF-217ENST00000575426 M0QXV9 152 aa9.49□□□□□ -0.89
LITAF-217ENST00000575426 S100A6P06703 90 aa9.49□□□□□ -0.89
LITAF-217ENST00000575426 KRTAP10-4P60372 401 aaPredicted RBP9.49□□□□□ -0.89
LITAF-217ENST00000575426 MYMXA0A1B0GTQ4 84 aa9.48□□□□□ -0.89
LITAF-217ENST00000575426 C3orf79P0CE67 100 aa9.48□□□□□ -0.89
LITAF-217ENST00000575426 LINC00158P58513 81 aa9.48□□□□□ -0.89
LITAF-217ENST00000575426 KRTDAPP60985 99 aa9.48□□□□□ -0.89
LITAF-217ENST00000575426 HERV-K104P63124 156 aa9.48□□□□□ -0.89
LITAF-217ENST00000575426 LINC00587B1AMM8 73 aa9.47□□□□□ -0.89
LITAF-217ENST00000575426 UBE2BP63146 152 aa9.47□□□□□ -0.89
LITAF-217ENST00000575426 PRR3P79522 188 aaKnown RBP9.47□□□□□ -0.89
LITAF-217ENST00000575426 NDUFA12Q9UI09 145 aa9.47□□□□□ -0.89
LITAF-217ENST00000575426 VPS13BQ7Z7G8 4022 aa9.47□□□□□ -0.89
LITAF-217ENST00000575426 C20orf202A1L168 122 aa9.46□□□□□ -0.9
LITAF-217ENST00000575426 LGALS3P17931 250 aaKnown RBP9.46□□□□□ -0.9
LITAF-217ENST00000575426 S100A2P29034 98 aa9.46□□□□□ -0.9
LITAF-217ENST00000575426 LBHQ53QV2 105 aaPredicted RBP9.46□□□□□ -0.9
LITAF-217ENST00000575426 MEIG1Q5JSS6 88 aa9.46□□□□□ -0.9
LITAF-217ENST00000575426 LINC01545Q5VT33 79 aa9.46□□□□□ -0.9
LITAF-217ENST00000575426 J3QQQ9 107 aa9.45□□□□□ -0.9
LITAF-217ENST00000575426 PLA2G2DQ9UNK4 145 aa9.45□□□□□ -0.9
LITAF-217ENST00000575426 C22orf24Q9Y442 160 aa9.45□□□□□ -0.9
LITAF-217ENST00000575426 PCLOQ9Y6V0 5065 aa9.45□□□□□ -0.9
LITAF-217ENST00000575426 ABCA13Q86UQ4 5058 aa9.44□□□□□ -0.9
LITAF-217ENST00000575426 A0A0U1RRA0 63 aa9.44□□□□□ -0.9
LITAF-217ENST00000575426 SERTAD4-AS1Q5TG53 156 aa9.44□□□□□ -0.9
LITAF-217ENST00000575426 KRTAP7-1Q8IUC3 87 aa9.44□□□□□ -0.9
LITAF-217ENST00000575426 PSORS1C2Q9UIG4 136 aa9.44□□□□□ -0.9
LITAF-217ENST00000575426 NMUP48645 174 aa9.43□□□□□ -0.9
LITAF-217ENST00000575426 NKAPP1Q8N9T2 125 aa9.43□□□□□ -0.9
LITAF-217ENST00000575426 SND1-IT1Q9HBX3 110 aa9.43□□□□□ -0.9
LITAF-217ENST00000575426 TP73-AS1Q9UF72 201 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms