RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 Q6ZRU5 148 aa8.78□□□□□ -1
NDE1-209ENST00000574109 SLPIP03973 132 aa8.77□□□□□ -1.01
NDE1-209ENST00000574109 LINC00526Q96FQ7 95 aa8.77□□□□□ -1.01
NDE1-209ENST00000574109 LINC00474Q9P2X8 69 aa8.77□□□□□ -1.01
NDE1-209ENST00000574109 LOC107984640A0A0U1RRK4 108 aa8.76□□□□□ -1.01
NDE1-209ENST00000574109 PLEKHB2Q96CS7 222 aa8.76□□□□□ -1.01
NDE1-209ENST00000574109 TLX1NBP0CAT3 122 aa8.75□□□□□ -1.01
NDE1-209ENST00000574109 Q6ZSA8 131 aa8.75□□□□□ -1.01
NDE1-209ENST00000574109 PMCHL2Q9BQD1 86 aa8.75□□□□□ -1.01
NDE1-209ENST00000574109 LEPROTO15243 131 aa8.74□□□□□ -1.01
NDE1-209ENST00000574109 NMUP48645 174 aa8.74□□□□□ -1.01
NDE1-209ENST00000574109 TMA7Q9Y2S6 64 aaKnown RBP8.74□□□□□ -1.01
NDE1-209ENST00000574109 E9PLD3 99 aa8.73□□□□□ -1.01
NDE1-209ENST00000574109 CDK2AP2O75956 126 aa8.73□□□□□ -1.01
NDE1-209ENST00000574109 FUSP35637 526 aaKnown RBP eCLIP8.73□□□□□ -1.01
NDE1-209ENST00000574109 KRTAP10-1P60331 282 aa8.73□□□□□ -1.01
NDE1-209ENST00000574109 HERV-K104P63124 156 aa8.73□□□□□ -1.01
NDE1-209ENST00000574109 C2orf82Q6UX34 121 aa8.73□□□□□ -1.01
NDE1-209ENST00000574109 UNQ6190/PRO20217Q6UXQ8 127 aa8.73□□□□□ -1.01
NDE1-209ENST00000574109 SDIM1Q6ZPB5 146 aa8.73□□□□□ -1.01
NDE1-209ENST00000574109 C6orf48Q9UBA6 75 aa8.73□□□□□ -1.01
NDE1-209ENST00000574109 NDUFC2-KCTD14E9PQ53 114 aa8.72□□□□□ -1.01
NDE1-209ENST00000574109 CIRBPQ14011 172 aaKnown RBP8.72□□□□□ -1.01
NDE1-209ENST00000574109 LINC00587B1AMM8 73 aa8.71□□□□□ -1.02
NDE1-209ENST00000574109 J3QQQ9 107 aa8.71□□□□□ -1.02
NDE1-209ENST00000574109 LGALS3P17931 250 aaKnown RBP8.71□□□□□ -1.02
NDE1-209ENST00000574109 RPL18AQ02543 176 aaKnown RBP8.71□□□□□ -1.02
NDE1-209ENST00000574109 COX17Q14061 63 aa8.71□□□□□ -1.02
NDE1-209ENST00000574109 C10orf25Q5T742 122 aa8.71□□□□□ -1.02
NDE1-209ENST00000574109 ZNF625Q96I27 306 aaPredicted RBP8.71□□□□□ -1.02
NDE1-209ENST00000574109 DNAH5Q8TE73 4624 aa8.71□□□□□ -1.02
NDE1-209ENST00000574109 MYMXA0A1B0GTQ4 84 aa8.7□□□□□ -1.02
NDE1-209ENST00000574109 PTTG1IPP53801 180 aa8.7□□□□□ -1.02
NDE1-209ENST00000574109 LINC01620Q4KN68 170 aa8.7□□□□□ -1.02
NDE1-209ENST00000574109 NDUFA12Q9UI09 145 aa8.7□□□□□ -1.02
NDE1-209ENST00000574109 HSBP1L1C9JCN9 74 aa8.69□□□□□ -1.02
NDE1-209ENST00000574109 SPACA4Q8TDM5 124 aa8.69□□□□□ -1.02
NDE1-209ENST00000574109 EPPK1P58107 5090 aaKnown RBP8.69□□□□□ -1.02
NDE1-209ENST00000574109 A0A096LNI7 61 aa8.68□□□□□ -1.02
NDE1-209ENST00000574109 ERG28Q9UKR5 140 aa8.68□□□□□ -1.02
NDE1-209ENST00000574109 IGKV2-24A0A0C4DH68 120 aa8.66□□□□□ -1.02
NDE1-209ENST00000574109 SCGB1D1O95968 90 aa8.66□□□□□ -1.02
NDE1-209ENST00000574109 TSPEAR-AS2P59090 65 aa8.66□□□□□ -1.02
NDE1-209ENST00000574109 GAGE2BQ13066 116 aa8.66□□□□□ -1.02
NDE1-209ENST00000574109 Q6ZRP5 223 aa8.66□□□□□ -1.02
NDE1-209ENST00000574109 DYNC1H1Q14204 4646 aaKnown RBP8.65□□□□□ -1.02
NDE1-209ENST00000574109 LRP1BQ9NZR2 4599 aa8.65□□□□□ -1.02
NDE1-209ENST00000574109 MAJINQ3KP22 176 aa8.65□□□□□ -1.02
NDE1-209ENST00000574109 C9orf116Q5BN46 136 aaPredicted RBP8.65□□□□□ -1.02
NDE1-209ENST00000574109 ATOH7Q8N100 152 aa8.65□□□□□ -1.02
NDE1-209ENST00000574109 STPG4Q8N801 248 aa8.65□□□□□ -1.02
NDE1-209ENST00000574109 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.65□□□□□ -1.02
NDE1-209ENST00000574109 CHTF8P0CG12 524 aa8.64□□□□□ -1.03
NDE1-209ENST00000574109 MEIG1Q5JSS6 88 aa8.64□□□□□ -1.03
NDE1-209ENST00000574109 SCXQ7RTU7 201 aa8.64□□□□□ -1.03
NDE1-209ENST00000574109 FAM30AQ9NZY2 134 aa8.64□□□□□ -1.03
NDE1-209ENST00000574109 JOSD1Q15040 202 aaPredicted RBP8.63□□□□□ -1.03
NDE1-209ENST00000574109 PLAC8Q9NZF1 115 aa8.63□□□□□ -1.03
NDE1-209ENST00000574109 PFN2P35080 140 aa8.62□□□□□ -1.03
NDE1-209ENST00000574109 GAGE2EQ4V326 116 aa8.62□□□□□ -1.03
NDE1-209ENST00000574109 DPH3Q96FX2 82 aa8.62□□□□□ -1.03
NDE1-209ENST00000574109 GAGE2DQ9UEU5 116 aa8.62□□□□□ -1.03
NDE1-209ENST00000574109 A0A087WYN8 130 aa8.61□□□□□ -1.03
NDE1-209ENST00000574109 ZNF815PA8K554 130 aa8.61□□□□□ -1.03
NDE1-209ENST00000574109 LINC00158P58513 81 aa8.61□□□□□ -1.03
NDE1-209ENST00000574109 ANKRD39Q53RE8 183 aa8.61□□□□□ -1.03
NDE1-209ENST00000574109 CIRBP-AS1Q8TBR5 109 aa8.61□□□□□ -1.03
NDE1-209ENST00000574109 IGKV2D-26A0A0A0MRZ7 120 aa8.6□□□□□ -1.03
NDE1-209ENST00000574109 EPM2AB3EWF7 344 aa8.6□□□□□ -1.03
NDE1-209ENST00000574109 PANO1I0J062 215 aa8.6□□□□□ -1.03
NDE1-209ENST00000574109 TIMM17BO60830 172 aa8.6□□□□□ -1.03
NDE1-209ENST00000574109 XGP55808 180 aa8.6□□□□□ -1.03
NDE1-209ENST00000574109 VAMP8Q9BV40 100 aa8.59□□□□□ -1.03
NDE1-209ENST00000574109 PLA2G2DQ9UNK4 145 aa8.59□□□□□ -1.03
NDE1-209ENST00000574109 A0A0J9YXY3 114 aa8.58□□□□□ -1.04
NDE1-209ENST00000574109 TMEM238C9JI98 176 aa8.58□□□□□ -1.04
NDE1-209ENST00000574109 SMIM13P0DJ93 91 aa8.58□□□□□ -1.04
NDE1-209ENST00000574109 C9orf129Q5T035 196 aaKnown RBP8.58□□□□□ -1.04
NDE1-209ENST00000574109 SCGB1D4Q6XE38 83 aa8.58□□□□□ -1.04
NDE1-209ENST00000574109 C7orf33Q8WU49 177 aa8.58□□□□□ -1.04
NDE1-209ENST00000574109 SND1-IT1Q9HBX3 110 aa8.58□□□□□ -1.04
NDE1-209ENST00000574109 XAGE1AQ9HD64 81 aa8.58□□□□□ -1.04
NDE1-209ENST00000574109 TP73-AS1Q9UF72 201 aa8.58□□□□□ -1.04
NDE1-209ENST00000574109 COPS9Q8WXC6 57 aa8.57□□□□□ -1.04
NDE1-209ENST00000574109 MIEN1Q9BRT3 115 aa8.57□□□□□ -1.04
NDE1-209ENST00000574109 BIRC6Q9NR09 4857 aa8.57□□□□□ -1.04
NDE1-209ENST00000574109 APOBP04114 4563 aaKnown RBP8.56□□□□□ -1.04
NDE1-209ENST00000574109 RPL24P83731 157 aaKnown RBP8.56□□□□□ -1.04
NDE1-209ENST00000574109 MIR7-3HGQ8N6C7 128 aa8.56□□□□□ -1.04
NDE1-209ENST00000574109 DNAH8Q96JB1 4490 aa8.56□□□□□ -1.04
NDE1-209ENST00000574109 IGLV5-37A0A075B6J1 123 aa8.55□□□□□ -1.04
NDE1-209ENST00000574109 M0QXV9 152 aa8.55□□□□□ -1.04
NDE1-209ENST00000574109 PYY3Q5JQD4 70 aa8.55□□□□□ -1.04
NDE1-209ENST00000574109 FAM19A5Q7Z5A7 132 aaPredicted RBP8.55□□□□□ -1.04
NDE1-209ENST00000574109 LOC107984156A0A0G2JMH3 177 aa8.54□□□□□ -1.04
NDE1-209ENST00000574109 HAMPP81172 84 aa8.54□□□□□ -1.04
NDE1-209ENST00000574109 LBHQ53QV2 105 aaPredicted RBP8.54□□□□□ -1.04
NDE1-209ENST00000574109 Q6ZVH6 145 aa8.54□□□□□ -1.04
NDE1-209ENST00000574109 PCP2Q8IVA1 136 aa8.54□□□□□ -1.04
NDE1-209ENST00000574109 ARL17AQ8IVW1 177 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 1745.6 ms