RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 MAJINQ3KP22 176 aa8.16□□□□□ -1.1
TRAPPC1-206ENST00000573989 TMEM170BQ5T4T1 132 aa8.16□□□□□ -1.1
TRAPPC1-206ENST00000573989 UNQ6190/PRO20217Q6UXQ8 127 aa8.16□□□□□ -1.1
TRAPPC1-206ENST00000573989 SPACA4Q8TDM5 124 aa8.16□□□□□ -1.1
TRAPPC1-206ENST00000573989 COX7B2Q8TF08 81 aa8.16□□□□□ -1.1
TRAPPC1-206ENST00000573989 DNAH8Q96JB1 4490 aa8.16□□□□□ -1.1
TRAPPC1-206ENST00000573989 A0A096LNI7 61 aa8.15□□□□□ -1.1
TRAPPC1-206ENST00000573989 EPM2AB3EWF7 344 aa8.15□□□□□ -1.1
TRAPPC1-206ENST00000573989 H0Y8G0 127 aa8.15□□□□□ -1.1
TRAPPC1-206ENST00000573989 NUPR1O60356 82 aa8.15□□□□□ -1.1
TRAPPC1-206ENST00000573989 SMR3BP02814 79 aaPredicted RBP8.15□□□□□ -1.1
TRAPPC1-206ENST00000573989 CHTF8P0CG12 524 aa8.15□□□□□ -1.1
TRAPPC1-206ENST00000573989 FABP4P15090 132 aa8.15□□□□□ -1.1
TRAPPC1-206ENST00000573989 MAP1LC3CQ9BXW4 147 aa8.15□□□□□ -1.1
TRAPPC1-206ENST00000573989 RYR1P21817 5038 aa8.15□□□□□ -1.11
TRAPPC1-206ENST00000573989 HSPG2P98160 4391 aa8.15□□□□□ -1.11
TRAPPC1-206ENST00000573989 C11orf86A6NJI1 115 aa8.14□□□□□ -1.11
TRAPPC1-206ENST00000573989 ZNF22P17026 224 aaPredicted RBP8.14□□□□□ -1.11
TRAPPC1-206ENST00000573989 PTTG1IPP53801 180 aa8.14□□□□□ -1.11
TRAPPC1-206ENST00000573989 GAGE2BQ13066 116 aa8.14□□□□□ -1.11
TRAPPC1-206ENST00000573989 C2orf82Q6UX34 121 aa8.14□□□□□ -1.11
TRAPPC1-206ENST00000573989 C6orf48Q9UBA6 75 aa8.14□□□□□ -1.11
TRAPPC1-206ENST00000573989 A0A087WYN8 130 aa8.13□□□□□ -1.11
TRAPPC1-206ENST00000573989 PANO1I0J062 215 aa8.13□□□□□ -1.11
TRAPPC1-206ENST00000573989 TLX1NBP0CAT3 122 aa8.13□□□□□ -1.11
TRAPPC1-206ENST00000573989 C10orf25Q5T742 122 aa8.13□□□□□ -1.11
TRAPPC1-206ENST00000573989 STPG4Q8N801 248 aa8.13□□□□□ -1.11
TRAPPC1-206ENST00000573989 PLA2G1BP04054 148 aaKnown RBP8.12□□□□□ -1.11
TRAPPC1-206ENST00000573989 ODF1Q14990 250 aa8.12□□□□□ -1.11
TRAPPC1-206ENST00000573989 Q5VSD8 79 aa8.12□□□□□ -1.11
TRAPPC1-206ENST00000573989 SFTA2Q6UW10 78 aa8.12□□□□□ -1.11
TRAPPC1-206ENST00000573989 LINC00528Q8N1L1 170 aa8.12□□□□□ -1.11
TRAPPC1-206ENST00000573989 PLAC8Q9NZF1 115 aa8.12□□□□□ -1.11
TRAPPC1-206ENST00000573989 HERC2O95714 4834 aa8.11□□□□□ -1.11
TRAPPC1-206ENST00000573989 IGLV5-39A0A0G2JS06 123 aa8.11□□□□□ -1.11
TRAPPC1-206ENST00000573989 NDUFC2-KCTD14E9PQ53 114 aa8.11□□□□□ -1.11
TRAPPC1-206ENST00000573989 PLNP26678 52 aa8.11□□□□□ -1.11
TRAPPC1-206ENST00000573989 COA6Q5JTJ3 125 aaKnown RBP8.11□□□□□ -1.11
TRAPPC1-206ENST00000573989 DPM2O94777 84 aa8.09□□□□□ -1.11
TRAPPC1-206ENST00000573989 GAGE2EQ4V326 116 aa8.09□□□□□ -1.11
TRAPPC1-206ENST00000573989 Q6ZRP5 223 aa8.09□□□□□ -1.11
TRAPPC1-206ENST00000573989 C7orf33Q8WU49 177 aa8.09□□□□□ -1.11
TRAPPC1-206ENST00000573989 GAGE2DQ9UEU5 116 aa8.09□□□□□ -1.11
TRAPPC1-206ENST00000573989 TMEM223A0PJW6 202 aa8.08□□□□□ -1.12
TRAPPC1-206ENST00000573989 C9orf116Q5BN46 136 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC1-206ENST00000573989 IGKCP01834 107 aa8.07□□□□□ -1.12
TRAPPC1-206ENST00000573989 HERVK_113P61574 105 aa8.07□□□□□ -1.12
TRAPPC1-206ENST00000573989 SYS1-DBNDD2H3BUS1 97 aa8.06□□□□□ -1.12
TRAPPC1-206ENST00000573989 S100A6P06703 90 aa8.06□□□□□ -1.12
TRAPPC1-206ENST00000573989 PET117Q6UWS5 81 aa8.06□□□□□ -1.12
TRAPPC1-206ENST00000573989 RPL37AP61513 92 aaKnown RBP8.05□□□□□ -1.12
TRAPPC1-206ENST00000573989 S100A2P29034 98 aa8.04□□□□□ -1.12
TRAPPC1-206ENST00000573989 COX17Q14061 63 aa8.04□□□□□ -1.12
TRAPPC1-206ENST00000573989 PMCHL2Q9BQD1 86 aa8.04□□□□□ -1.12
TRAPPC1-206ENST00000573989 KRTAP17-1Q9BYP8 105 aa8.04□□□□□ -1.12
TRAPPC1-206ENST00000573989 KRTAP4-5Q9BYR2 181 aa8.04□□□□□ -1.12
TRAPPC1-206ENST00000573989 A0A1W2PNN7 141 aa8.03□□□□□ -1.12
TRAPPC1-206ENST00000573989 C20orf202A1L168 122 aa8.03□□□□□ -1.12
TRAPPC1-206ENST00000573989 LINC01545Q5VT33 79 aa8.03□□□□□ -1.12
TRAPPC1-206ENST00000573989 PLEKHB2Q96CS7 222 aa8.03□□□□□ -1.12
TRAPPC1-206ENST00000573989 LINC00587B1AMM8 73 aa8.02□□□□□ -1.13
TRAPPC1-206ENST00000573989 LEPROTO15243 131 aa8.02□□□□□ -1.13
TRAPPC1-206ENST00000573989 C3orf79P0CE67 100 aa8.02□□□□□ -1.13
TRAPPC1-206ENST00000573989 INAFM2P0DMQ5 153 aa8.02□□□□□ -1.13
TRAPPC1-206ENST00000573989 PFN2P35080 140 aa8.02□□□□□ -1.13
TRAPPC1-206ENST00000573989 AKR1D1P51857 326 aa8.02□□□□□ -1.13
TRAPPC1-206ENST00000573989 KRTDAPP60985 99 aa8.02□□□□□ -1.13
TRAPPC1-206ENST00000573989 HERV-K104P63124 156 aa8.02□□□□□ -1.13
TRAPPC1-206ENST00000573989 FAM19A5Q7Z5A7 132 aaPredicted RBP8.02□□□□□ -1.13
TRAPPC1-206ENST00000573989 ERG28Q9UKR5 140 aa8.02□□□□□ -1.13
TRAPPC1-206ENST00000573989 MYMXA0A1B0GTQ4 84 aa8.01□□□□□ -1.13
TRAPPC1-206ENST00000573989 C9orf129Q5T035 196 aaKnown RBP8.01□□□□□ -1.13
TRAPPC1-206ENST00000573989 ZNF625Q96I27 306 aaPredicted RBP8.01□□□□□ -1.13
TRAPPC1-206ENST00000573989 XAGE1AQ9HD64 81 aa8.01□□□□□ -1.13
TRAPPC1-206ENST00000573989 NDUFA12Q9UI09 145 aa8.01□□□□□ -1.13
TRAPPC1-206ENST00000573989 FAT1Q14517 4588 aa8.01□□□□□ -1.13
TRAPPC1-206ENST00000573989 LGALS3P17931 250 aaKnown RBP8□□□□□ -1.13
TRAPPC1-206ENST00000573989 NMUP48645 174 aa8□□□□□ -1.13
TRAPPC1-206ENST00000573989 FAM168BA1KXE4 195 aa7.99□□□□□ -1.13
TRAPPC1-206ENST00000573989 J3QQQ9 107 aa7.99□□□□□ -1.13
TRAPPC1-206ENST00000573989 M0QXV9 152 aa7.99□□□□□ -1.13
TRAPPC1-206ENST00000573989 LINC00158P58513 81 aa7.99□□□□□ -1.13
TRAPPC1-206ENST00000573989 MEIG1Q5JSS6 88 aa7.99□□□□□ -1.13
TRAPPC1-206ENST00000573989 HIST3H2BBQ8N257 126 aa7.99□□□□□ -1.13
TRAPPC1-206ENST00000573989 PHF5AQ7RTV0 110 aaKnown RBP7.98□□□□□ -1.13
TRAPPC1-206ENST00000573989 E9PLD3 99 aa7.97□□□□□ -1.13
TRAPPC1-206ENST00000573989 UBE2BP63146 152 aa7.97□□□□□ -1.13
TRAPPC1-206ENST00000573989 LBHQ53QV2 105 aaPredicted RBP7.97□□□□□ -1.13
TRAPPC1-206ENST00000573989 PLA2G2DQ9UNK4 145 aa7.97□□□□□ -1.13
TRAPPC1-206ENST00000573989 SRRM2Q9UQ35 2752 aaKnown RBP7.97□□□□□ -1.13
TRAPPC1-206ENST00000573989 VPS13BQ7Z7G8 4022 aa7.97□□□□□ -1.13
TRAPPC1-206ENST00000573989 PRR3P79522 188 aaKnown RBP7.96□□□□□ -1.14
TRAPPC1-206ENST00000573989 NKAPP1Q8N9T2 125 aa7.96□□□□□ -1.14
TRAPPC1-206ENST00000573989 HIST1H2BLQ99880 126 aa7.96□□□□□ -1.14
TRAPPC1-206ENST00000573989 TP73-AS1Q9UF72 201 aa7.96□□□□□ -1.14
TRAPPC1-206ENST00000573989 KRTAP10-4P60372 401 aaPredicted RBP7.95□□□□□ -1.14
TRAPPC1-206ENST00000573989 SNRPEP62304 92 aaKnown RBP7.95□□□□□ -1.14
TRAPPC1-206ENST00000573989 RPL24P83731 157 aaKnown RBP7.95□□□□□ -1.14
TRAPPC1-206ENST00000573989 SND1-IT1Q9HBX3 110 aa7.95□□□□□ -1.14
TRAPPC1-206ENST00000573989 C22orf24Q9Y442 160 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms