RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 HIST1H2BJP06899 126 aa5.47□□□□□ -1.53
TRAPPC1-203ENST00000571739 SPINK8P0C7L1 97 aa5.47□□□□□ -1.53
TRAPPC1-203ENST00000571739 HIST1H2BOP23527 126 aa5.47□□□□□ -1.53
TRAPPC1-203ENST00000571739 HIST1H2BBP33778 126 aa5.47□□□□□ -1.53
TRAPPC1-203ENST00000571739 HIST1H2BDP58876 126 aa5.47□□□□□ -1.53
TRAPPC1-203ENST00000571739 HIST1H2BCP62807 126 aa5.47□□□□□ -1.53
TRAPPC1-203ENST00000571739 HIST2H2BEQ16778 126 aa5.47□□□□□ -1.53
TRAPPC1-203ENST00000571739 C9orf116Q5BN46 136 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC1-203ENST00000571739 C6orf226Q5I0X4 101 aa5.47□□□□□ -1.53
TRAPPC1-203ENST00000571739 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC1-203ENST00000571739 Q6ZRP5 223 aa5.47□□□□□ -1.53
TRAPPC1-203ENST00000571739 STPG4Q8N801 248 aa5.47□□□□□ -1.53
TRAPPC1-203ENST00000571739 HIST1H2BHQ93079 126 aa5.47□□□□□ -1.53
TRAPPC1-203ENST00000571739 IFI27L1Q96BM0 104 aa5.47□□□□□ -1.53
TRAPPC1-203ENST00000571739 PACRGQ96M98 296 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC1-203ENST00000571739 HIST1H2BNQ99877 126 aa5.47□□□□□ -1.53
TRAPPC1-203ENST00000571739 HIST1H2BMQ99879 126 aa5.47□□□□□ -1.53
TRAPPC1-203ENST00000571739 TRBV30A0A0K0K1B3 111 aa5.46□□□□□ -1.54
TRAPPC1-203ENST00000571739 C11orf86A6NJI1 115 aa5.46□□□□□ -1.54
TRAPPC1-203ENST00000571739 TLX1NBP0CAT3 122 aa5.46□□□□□ -1.54
TRAPPC1-203ENST00000571739 ZNF22P17026 224 aaPredicted RBP5.46□□□□□ -1.54
TRAPPC1-203ENST00000571739 CHTOPQ9Y3Y2 248 aaKnown RBP5.46□□□□□ -1.54
TRAPPC1-203ENST00000571739 TRAV12-1A0A0B4J245 112 aa5.45□□□□□ -1.54
TRAPPC1-203ENST00000571739 PLA2G1BP04054 148 aaKnown RBP5.45□□□□□ -1.54
TRAPPC1-203ENST00000571739 PRSS2P07478 247 aa5.45□□□□□ -1.54
TRAPPC1-203ENST00000571739 INAFM2P0DMQ5 153 aa5.45□□□□□ -1.54
TRAPPC1-203ENST00000571739 KRTAP7-1Q8IUC3 87 aa5.45□□□□□ -1.54
TRAPPC1-203ENST00000571739 COX7B2Q8TF08 81 aa5.45□□□□□ -1.54
TRAPPC1-203ENST00000571739 LINC00474Q9P2X8 69 aa5.45□□□□□ -1.54
TRAPPC1-203ENST00000571739 IGLV5-39A0A0G2JS06 123 aa5.44□□□□□ -1.54
TRAPPC1-203ENST00000571739 ATP6V1G1O75348 118 aa5.44□□□□□ -1.54
TRAPPC1-203ENST00000571739 LEPROTL1O95214 131 aa5.44□□□□□ -1.54
TRAPPC1-203ENST00000571739 FABP4P15090 132 aa5.44□□□□□ -1.54
TRAPPC1-203ENST00000571739 S100A1P23297 94 aa5.44□□□□□ -1.54
TRAPPC1-203ENST00000571739 CKS1BP61024 79 aa5.44□□□□□ -1.54
TRAPPC1-203ENST00000571739 RPL18AQ02543 176 aaKnown RBP5.44□□□□□ -1.54
TRAPPC1-203ENST00000571739 GAGE2EQ4V326 116 aa5.44□□□□□ -1.54
TRAPPC1-203ENST00000571739 GAGE2DQ9UEU5 116 aa5.44□□□□□ -1.54
TRAPPC1-203ENST00000571739 PKIGQ9Y2B9 76 aa5.44□□□□□ -1.54
TRAPPC1-203ENST00000571739 FAM168BA1KXE4 195 aa5.43□□□□□ -1.54
TRAPPC1-203ENST00000571739 NDUFC2-KCTD14E9PQ53 114 aa5.43□□□□□ -1.54
TRAPPC1-203ENST00000571739 F8VRH5 84 aa5.43□□□□□ -1.54
TRAPPC1-203ENST00000571739 H3BRM9 83 aa5.43□□□□□ -1.54
TRAPPC1-203ENST00000571739 HNRNPA3P51991 378 aaKnown RBP5.43□□□□□ -1.54
TRAPPC1-203ENST00000571739 ODF1Q14990 250 aa5.43□□□□□ -1.54
TRAPPC1-203ENST00000571739 C9orf129Q5T035 196 aaKnown RBP5.43□□□□□ -1.54
TRAPPC1-203ENST00000571739 VPS13BQ7Z7G8 4022 aa5.42□□□□□ -1.54
TRAPPC1-203ENST00000571739 CXCL5P42830 114 aa5.42□□□□□ -1.54
TRAPPC1-203ENST00000571739 RPL37AP61513 92 aaKnown RBP5.42□□□□□ -1.54
TRAPPC1-203ENST00000571739 TMEM170BQ5T4T1 132 aa5.42□□□□□ -1.54
TRAPPC1-203ENST00000571739 TMEM223A0PJW6 202 aa5.41□□□□□ -1.54
TRAPPC1-203ENST00000571739 COA6Q5JTJ3 125 aaKnown RBP5.41□□□□□ -1.54
TRAPPC1-203ENST00000571739 HSPB8Q9UJY1 196 aa5.41□□□□□ -1.54
TRAPPC1-203ENST00000571739 H0Y8G0 127 aa5.4□□□□□ -1.54
TRAPPC1-203ENST00000571739 PHF5AQ7RTV0 110 aaKnown RBP5.4□□□□□ -1.54
TRAPPC1-203ENST00000571739 KRTAP11-1Q8IUC1 163 aa5.4□□□□□ -1.54
TRAPPC1-203ENST00000571739 PMCHL2Q9BQD1 86 aa5.4□□□□□ -1.54
TRAPPC1-203ENST00000571739 XAGE1AQ9HD64 81 aa5.4□□□□□ -1.54
TRAPPC1-203ENST00000571739 C7orf33Q8WU49 177 aa5.39□□□□□ -1.55
TRAPPC1-203ENST00000571739 SERTAD4-AS1Q5TG53 156 aa5.38□□□□□ -1.55
TRAPPC1-203ENST00000571739 ZNF625Q96I27 306 aaPredicted RBP5.38□□□□□ -1.55
TRAPPC1-203ENST00000571739 FLG2Q5D862 2391 aaPredicted RBP5.37□□□□□ -1.55
TRAPPC1-203ENST00000571739 SYS1-DBNDD2H3BUS1 97 aa5.37□□□□□ -1.55
TRAPPC1-203ENST00000571739 PFN2P35080 140 aa5.37□□□□□ -1.55
TRAPPC1-203ENST00000571739 PRR3P79522 188 aaKnown RBP5.37□□□□□ -1.55
TRAPPC1-203ENST00000571739 SRSF9Q13242 221 aaKnown RBP eCLIP5.37□□□□□ -1.55
TRAPPC1-203ENST00000571739 FAM19A5Q7Z5A7 132 aaPredicted RBP5.37□□□□□ -1.55
TRAPPC1-203ENST00000571739 MAP1LC3CQ9BXW4 147 aa5.37□□□□□ -1.55
TRAPPC1-203ENST00000571739 DPM2O94777 84 aa5.36□□□□□ -1.55
TRAPPC1-203ENST00000571739 IGKCP01834 107 aa5.36□□□□□ -1.55
TRAPPC1-203ENST00000571739 PSORS1C2Q9UIG4 136 aa5.36□□□□□ -1.55
TRAPPC1-203ENST00000571739 ERG28Q9UKR5 140 aa5.36□□□□□ -1.55
TRAPPC1-203ENST00000571739 C22orf24Q9Y442 160 aa5.36□□□□□ -1.55
TRAPPC1-203ENST00000571739 KRTAP29-1A8MX34 341 aaPredicted RBP5.35□□□□□ -1.55
TRAPPC1-203ENST00000571739 C3orf79P0CE67 100 aa5.35□□□□□ -1.55
TRAPPC1-203ENST00000571739 PLNP26678 52 aa5.35□□□□□ -1.55
TRAPPC1-203ENST00000571739 TSPEAR-AS2P59090 65 aa5.35□□□□□ -1.55
TRAPPC1-203ENST00000571739 COX17Q14061 63 aa5.35□□□□□ -1.55
TRAPPC1-203ENST00000571739 LINC01545Q5VT33 79 aa5.35□□□□□ -1.55
TRAPPC1-203ENST00000571739 PLA2G2DQ9UNK4 145 aa5.35□□□□□ -1.55
TRAPPC1-203ENST00000571739 PKHD1L1Q86WI1 4243 aa5.34□□□□□ -1.55
TRAPPC1-203ENST00000571739 M0QXV9 152 aa5.34□□□□□ -1.55
TRAPPC1-203ENST00000571739 LEPROTO15243 131 aa5.34□□□□□ -1.55
TRAPPC1-203ENST00000571739 PET117Q6UWS5 81 aa5.34□□□□□ -1.55
TRAPPC1-203ENST00000571739 SND1-IT1Q9HBX3 110 aa5.34□□□□□ -1.55
TRAPPC1-203ENST00000571739 A0A0U1RRA0 63 aa5.33□□□□□ -1.56
TRAPPC1-203ENST00000571739 SFTA2Q6UW10 78 aa5.33□□□□□ -1.56
TRAPPC1-203ENST00000571739 Q8NDZ9 215 aa5.33□□□□□ -1.56
TRAPPC1-203ENST00000571739 NDUFA12Q9UI09 145 aa5.33□□□□□ -1.56
TRAPPC1-203ENST00000571739 SRRM2Q9UQ35 2752 aaKnown RBP5.33□□□□□ -1.56
TRAPPC1-203ENST00000571739 LRP1Q07954 4544 aaKnown RBP5.33□□□□□ -1.56
TRAPPC1-203ENST00000571739 IGLV5-37A0A075B6J1 123 aa5.32□□□□□ -1.56
TRAPPC1-203ENST00000571739 J3QQQ9 107 aa5.32□□□□□ -1.56
TRAPPC1-203ENST00000571739 SMIM13P0DJ93 91 aa5.32□□□□□ -1.56
TRAPPC1-203ENST00000571739 LINC00158P58513 81 aa5.32□□□□□ -1.56
TRAPPC1-203ENST00000571739 C1orf137Q5JT78 98 aa5.32□□□□□ -1.56
TRAPPC1-203ENST00000571739 PLEKHB2Q96CS7 222 aa5.32□□□□□ -1.56
TRAPPC1-203ENST00000571739 LINC00167Q96N53 147 aa5.32□□□□□ -1.56
TRAPPC1-203ENST00000571739 TP73-AS1Q9UF72 201 aa5.32□□□□□ -1.56
TRAPPC1-203ENST00000571739 MYCBP2O75592 4640 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms