RNA–Protein interactions for RNA: ENST00000570150.1

PKD1-238, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-238	ENST00000570150	TOMM7	Q9P0U1	55 aa		11.41	□□□□□ -0.58
PKD1-238	ENST00000570150		A0A096LNJ9	63 aa		11.4	□□□□□ -0.58
PKD1-238	ENST00000570150	PANO1	I0J062	215 aa		11.4	□□□□□ -0.58
PKD1-238	ENST00000570150	IGLC3	P0DOY3	106 aa		11.4	□□□□□ -0.58
PKD1-238	ENST00000570150	TRAV12-1	A0A0B4J245	112 aa		11.39	□□□□□ -0.59
PKD1-238	ENST00000570150	COLCA2	A8K830	154 aa		11.39	□□□□□ -0.59
PKD1-238	ENST00000570150	NDUFC2-KCTD14	E9PQ53	114 aa		11.39	□□□□□ -0.59
PKD1-238	ENST00000570150	UNQ6190/PRO20217	Q6UXQ8	127 aa		11.39	□□□□□ -0.59
PKD1-238	ENST00000570150	IFI27L1	Q96BM0	104 aa		11.38	□□□□□ -0.59
PKD1-238	ENST00000570150	C6orf48	Q9UBA6	75 aa		11.38	□□□□□ -0.59
PKD1-238	ENST00000570150	SMIM1	B2RUZ4	78 aa		11.37	□□□□□ -0.59
PKD1-238	ENST00000570150	COX7B2	Q8TF08	81 aa		11.37	□□□□□ -0.59
PKD1-238	ENST00000570150	ODF1	Q14990	250 aa		11.36	□□□□□ -0.59
PKD1-238	ENST00000570150	PMCHL1	Q16048	86 aa		11.36	□□□□□ -0.59
PKD1-238	ENST00000570150	HSPB8	Q9UJY1	196 aa		11.36	□□□□□ -0.59
PKD1-238	ENST00000570150	CHTOP	Q9Y3Y2	248 aa	Known RBP	11.35	□□□□□ -0.59
PKD1-238	ENST00000570150	LEPROTL1	O95214	131 aa		11.34	□□□□□ -0.59
PKD1-238	ENST00000570150	C10orf25	Q5T742	122 aa		11.34	□□□□□ -0.59
PKD1-238	ENST00000570150	C2orf82	Q6UX34	121 aa		11.34	□□□□□ -0.59
PKD1-238	ENST00000570150	SRRM2	Q9UQ35	2752 aa	Known RBP	11.34	□□□□□ -0.59
PKD1-238	ENST00000570150	C9orf116	Q5BN46	136 aa	Predicted RBP	11.32	□□□□□ -0.6
PKD1-238	ENST00000570150	TMEM170B	Q5T4T1	132 aa		11.32	□□□□□ -0.6
PKD1-238	ENST00000570150		Q6ZRP5	223 aa		11.32	□□□□□ -0.6
PKD1-238	ENST00000570150	SERF1A	O75920	110 aa		11.31	□□□□□ -0.6
PKD1-238	ENST00000570150	SPINK8	P0C7L1	97 aa		11.31	□□□□□ -0.6
PKD1-238	ENST00000570150	IGLV5-39	A0A0G2JS06	123 aa		11.3	□□□□□ -0.6
PKD1-238	ENST00000570150	ZNF22	P17026	224 aa	Predicted RBP	11.3	□□□□□ -0.6
PKD1-238	ENST00000570150	S100A1	P23297	94 aa		11.3	□□□□□ -0.6
PKD1-238	ENST00000570150	GAGE2E	Q4V326	116 aa		11.3	□□□□□ -0.6
PKD1-238	ENST00000570150	GAGE2D	Q9UEU5	116 aa		11.3	□□□□□ -0.6
PKD1-238	ENST00000570150	HERC1	Q15751	4861 aa		11.29	□□□□□ -0.6
PKD1-238	ENST00000570150	PLN	P26678	52 aa		11.29	□□□□□ -0.6
PKD1-238	ENST00000570150	COX17	Q14061	63 aa		11.29	□□□□□ -0.6
PKD1-238	ENST00000570150	OXT	P01178	125 aa		11.28	□□□□□ -0.6
PKD1-238	ENST00000570150	KRTAP10-4	P60372	401 aa	Predicted RBP	11.28	□□□□□ -0.6
PKD1-238	ENST00000570150	FAM19A2	Q8N3H0	131 aa		11.28	□□□□□ -0.6
PKD1-238	ENST00000570150	C11orf86	A6NJI1	115 aa		11.27	□□□□□ -0.61
PKD1-238	ENST00000570150	MYCBP2	O75592	4640 aa		11.27	□□□□□ -0.61
PKD1-238	ENST00000570150	LINC00587	B1AMM8	73 aa		11.26	□□□□□ -0.61
PKD1-238	ENST00000570150	PRR3	P79522	188 aa	Known RBP	11.26	□□□□□ -0.61
PKD1-238	ENST00000570150	LBH	Q53QV2	105 aa	Predicted RBP	11.26	□□□□□ -0.61
PKD1-238	ENST00000570150	MAP1LC3C	Q9BXW4	147 aa		11.26	□□□□□ -0.61
PKD1-238	ENST00000570150		A0A1W2PNN7	141 aa		11.25	□□□□□ -0.61
PKD1-238	ENST00000570150	KRTAP29-1	A8MX34	341 aa	Predicted RBP	11.24	□□□□□ -0.61
PKD1-238	ENST00000570150	FLG2	Q5D862	2391 aa	Predicted RBP	11.24	□□□□□ -0.61
PKD1-238	ENST00000570150		J3QL48	77 aa		11.23	□□□□□ -0.61
PKD1-238	ENST00000570150	HIST1H2BK	O60814	126 aa		11.23	□□□□□ -0.61
PKD1-238	ENST00000570150	HIST1H2BJ	P06899	126 aa		11.23	□□□□□ -0.61
PKD1-238	ENST00000570150	HIST1H2BO	P23527	126 aa		11.23	□□□□□ -0.61
PKD1-238	ENST00000570150	HIST1H2BB	P33778	126 aa		11.23	□□□□□ -0.61
PKD1-238	ENST00000570150	HIST1H2BD	P58876	126 aa		11.23	□□□□□ -0.61
PKD1-238	ENST00000570150	HIST1H2BC	P62807	126 aa		11.23	□□□□□ -0.61
PKD1-238	ENST00000570150	HIST2H2BE	Q16778	126 aa		11.23	□□□□□ -0.61
PKD1-238	ENST00000570150	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	11.23	□□□□□ -0.61
PKD1-238	ENST00000570150	HIST1H2BH	Q93079	126 aa		11.23	□□□□□ -0.61
PKD1-238	ENST00000570150	HIST1H2BN	Q99877	126 aa		11.23	□□□□□ -0.61
PKD1-238	ENST00000570150	HIST1H2BM	Q99879	126 aa		11.23	□□□□□ -0.61
PKD1-238	ENST00000570150	TP73-AS1	Q9UF72	201 aa		11.23	□□□□□ -0.61
PKD1-238	ENST00000570150	TMEM223	A0PJW6	202 aa		11.22	□□□□□ -0.61
PKD1-238	ENST00000570150		M0QXV9	152 aa		11.22	□□□□□ -0.61
PKD1-238	ENST00000570150	HERVK_113	P61574	105 aa		11.22	□□□□□ -0.61
PKD1-238	ENST00000570150	SPINK6	Q6UWN8	80 aa		11.22	□□□□□ -0.61
PKD1-238	ENST00000570150	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	11.22	□□□□□ -0.61
PKD1-238	ENST00000570150	SCO1	O75880	301 aa		11.21	□□□□□ -0.61
PKD1-238	ENST00000570150	HERV-K104	P63124	156 aa		11.21	□□□□□ -0.61
PKD1-238	ENST00000570150	PLA2G2D	Q9UNK4	145 aa		11.21	□□□□□ -0.61
PKD1-238	ENST00000570150	DPM2	O94777	84 aa		11.2	□□□□□ -0.62
PKD1-238	ENST00000570150	LINC00310	P59036	64 aa		11.2	□□□□□ -0.62
PKD1-238	ENST00000570150	UBE2B	P63146	152 aa		11.2	□□□□□ -0.62
PKD1-238	ENST00000570150	DMBT1	Q9UGM3	2413 aa	Predicted RBP	11.2	□□□□□ -0.62
PKD1-238	ENST00000570150		H0Y8G0	127 aa		11.19	□□□□□ -0.62
PKD1-238	ENST00000570150	FABP4	P15090	132 aa		11.19	□□□□□ -0.62
PKD1-238	ENST00000570150	AKR1D1	P51857	326 aa		11.19	□□□□□ -0.62
PKD1-238	ENST00000570150	C9orf129	Q5T035	196 aa	Known RBP	11.19	□□□□□ -0.62
PKD1-238	ENST00000570150	REG3G	Q6UW15	175 aa		11.19	□□□□□ -0.62
PKD1-238	ENST00000570150	ERG28	Q9UKR5	140 aa		11.19	□□□□□ -0.62
PKD1-238	ENST00000570150	ATP6V1G1	O75348	118 aa		11.17	□□□□□ -0.62
PKD1-238	ENST00000570150	RPL24	P83731	157 aa	Known RBP	11.17	□□□□□ -0.62
PKD1-238	ENST00000570150	COA6	Q5JTJ3	125 aa	Known RBP	11.17	□□□□□ -0.62
PKD1-238	ENST00000570150	PHF5A	Q7RTV0	110 aa	Known RBP	11.17	□□□□□ -0.62
PKD1-238	ENST00000570150	PLEKHB2	Q96CS7	222 aa		11.17	□□□□□ -0.62
PKD1-238	ENST00000570150	XAGE1A	Q9HD64	81 aa		11.17	□□□□□ -0.62
PKD1-238	ENST00000570150	MYMX	A0A1B0GTQ4	84 aa		11.16	□□□□□ -0.62
PKD1-238	ENST00000570150	FAM168B	A1KXE4	195 aa		11.16	□□□□□ -0.62
PKD1-238	ENST00000570150	NUPR1	O60356	82 aa		11.16	□□□□□ -0.62
PKD1-238	ENST00000570150	IGKC	P01834	107 aa		11.16	□□□□□ -0.62
PKD1-238	ENST00000570150	NKAPP1	Q8N9T2	125 aa		11.16	□□□□□ -0.62
PKD1-238	ENST00000570150	ZNF625	Q96I27	306 aa	Predicted RBP	11.16	□□□□□ -0.62
PKD1-238	ENST00000570150	PSORS1C2	Q9UIG4	136 aa		11.16	□□□□□ -0.62
PKD1-238	ENST00000570150	PFN2	P35080	140 aa		11.15	□□□□□ -0.62
PKD1-238	ENST00000570150	NMU	P48645	174 aa		11.15	□□□□□ -0.62
PKD1-238	ENST00000570150	C1orf137	Q5JT78	98 aa		11.15	□□□□□ -0.62
PKD1-238	ENST00000570150	MRPL55	Q7Z7F7	128 aa	Known RBP	11.14	□□□□□ -0.63
PKD1-238	ENST00000570150	C22orf24	Q9Y442	160 aa		11.14	□□□□□ -0.63
PKD1-238	ENST00000570150	IGLV5-37	A0A075B6J1	123 aa		11.13	□□□□□ -0.63
PKD1-238	ENST00000570150	PET117	Q6UWS5	81 aa		11.13	□□□□□ -0.63
PKD1-238	ENST00000570150	SYS1-DBNDD2	H3BUS1	97 aa		11.12	□□□□□ -0.63
PKD1-238	ENST00000570150	LEPROT	O15243	131 aa		11.12	□□□□□ -0.63
PKD1-238	ENST00000570150	DIRC1	Q969H9	104 aa		11.12	□□□□□ -0.63
PKD1-238	ENST00000570150	NDUFA12	Q9UI09	145 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 1062.2 ms