RNA–Protein interactions for RNA: ENST00000569963.1

NAE1-222, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 2

Gene NAE1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-222ENST00000569963 SPACA4Q8TDM5 124 aa12.59□□□□□ -0.39
NAE1-222ENST00000569963 TOMM7Q9P0U1 55 aa12.59□□□□□ -0.39
NAE1-222ENST00000569963 TRBV30A0A0K0K1B3 111 aa12.58□□□□□ -0.4
NAE1-222ENST00000569963 C11orf86A6NJI1 115 aa12.58□□□□□ -0.4
NAE1-222ENST00000569963 F8VRH5 84 aa12.58□□□□□ -0.4
NAE1-222ENST00000569963 FABP4P15090 132 aa12.58□□□□□ -0.4
NAE1-222ENST00000569963 SPINK8P0C7L1 97 aa12.57□□□□□ -0.4
NAE1-222ENST00000569963 CKS1BP61024 79 aa12.57□□□□□ -0.4
NAE1-222ENST00000569963 C2orf82Q6UX34 121 aa12.57□□□□□ -0.4
NAE1-222ENST00000569963 KRTAP17-1Q9BYP8 105 aa12.57□□□□□ -0.4
NAE1-222ENST00000569963 C6orf48Q9UBA6 75 aa12.57□□□□□ -0.4
NAE1-222ENST00000569963 A0A096LNI7 61 aa12.56□□□□□ -0.4
NAE1-222ENST00000569963 IGLV5-39A0A0G2JS06 123 aa12.56□□□□□ -0.4
NAE1-222ENST00000569963 TLX1NBP0CAT3 122 aa12.56□□□□□ -0.4
NAE1-222ENST00000569963 CHTF8P0CG12 524 aa12.56□□□□□ -0.4
NAE1-222ENST00000569963 CXCL5P42830 114 aa12.56□□□□□ -0.4
NAE1-222ENST00000569963 COX7B2Q8TF08 81 aa12.56□□□□□ -0.4
NAE1-222ENST00000569963 ODF1Q14990 250 aa12.55□□□□□ -0.4
NAE1-222ENST00000569963 TMEM170BQ5T4T1 132 aa12.55□□□□□ -0.4
NAE1-222ENST00000569963 DPH3Q96FX2 82 aa12.55□□□□□ -0.4
NAE1-222ENST00000569963 IGKV2-24A0A0C4DH68 120 aa12.54□□□□□ -0.4
NAE1-222ENST00000569963 SMR3BP02814 79 aaPredicted RBP12.54□□□□□ -0.4
NAE1-222ENST00000569963 PTTG1IPP53801 180 aa12.54□□□□□ -0.4
NAE1-222ENST00000569963 A0A087WYN8 130 aa12.53□□□□□ -0.4
NAE1-222ENST00000569963 MAJINQ3KP22 176 aa12.53□□□□□ -0.4
NAE1-222ENST00000569963 MAP1LC3CQ9BXW4 147 aa12.53□□□□□ -0.4
NAE1-222ENST00000569963 PLAC8Q9NZF1 115 aa12.53□□□□□ -0.4
NAE1-222ENST00000569963 H0Y8G0 127 aa12.52□□□□□ -0.41
NAE1-222ENST00000569963 GAGE2BQ13066 116 aa12.52□□□□□ -0.41
NAE1-222ENST00000569963 FAM229AH3BQW9 127 aa12.51□□□□□ -0.41
NAE1-222ENST00000569963 TMEM223A0PJW6 202 aa12.5□□□□□ -0.41
NAE1-222ENST00000569963 PLNP26678 52 aa12.5□□□□□ -0.41
NAE1-222ENST00000569963 RPL18AQ02543 176 aaKnown RBP12.5□□□□□ -0.41
NAE1-222ENST00000569963 STPG4Q8N801 248 aa12.5□□□□□ -0.41
NAE1-222ENST00000569963 EPM2AB3EWF7 344 aa12.49□□□□□ -0.41
NAE1-222ENST00000569963 NDUFC2-KCTD14E9PQ53 114 aa12.49□□□□□ -0.41
NAE1-222ENST00000569963 Q6ZRP5 223 aa12.49□□□□□ -0.41
NAE1-222ENST00000569963 C9orf116Q5BN46 136 aaPredicted RBP12.48□□□□□ -0.41
NAE1-222ENST00000569963 LINC00528Q8N1L1 170 aa12.48□□□□□ -0.41
NAE1-222ENST00000569963 Q5VSD8 79 aa12.47□□□□□ -0.41
NAE1-222ENST00000569963 SYS1-DBNDD2H3BUS1 97 aa12.46□□□□□ -0.41
NAE1-222ENST00000569963 DPM2O94777 84 aa12.46□□□□□ -0.41
NAE1-222ENST00000569963 SFTA2Q6UW10 78 aa12.46□□□□□ -0.41
NAE1-222ENST00000569963 KRTAP4-5Q9BYR2 181 aa12.46□□□□□ -0.41
NAE1-222ENST00000569963 IGKCP01834 107 aa12.44□□□□□ -0.42
NAE1-222ENST00000569963 PET117Q6UWS5 81 aa12.44□□□□□ -0.42
NAE1-222ENST00000569963 PLA2G1BP04054 148 aaKnown RBP12.43□□□□□ -0.42
NAE1-222ENST00000569963 GAGE2EQ4V326 116 aa12.43□□□□□ -0.42
NAE1-222ENST00000569963 PMCHL2Q9BQD1 86 aa12.43□□□□□ -0.42
NAE1-222ENST00000569963 GAGE2DQ9UEU5 116 aa12.43□□□□□ -0.42
NAE1-222ENST00000569963 A0A1W2PNN7 141 aa12.42□□□□□ -0.42
NAE1-222ENST00000569963 FAT1Q14517 4588 aa12.41□□□□□ -0.42
NAE1-222ENST00000569963 C3orf79P0CE67 100 aa12.41□□□□□ -0.42
NAE1-222ENST00000569963 LINC01545Q5VT33 79 aa12.41□□□□□ -0.42
NAE1-222ENST00000569963 ZNF625Q96I27 306 aaPredicted RBP12.41□□□□□ -0.42
NAE1-222ENST00000569963 S100A6P06703 90 aa12.39□□□□□ -0.43
NAE1-222ENST00000569963 C7orf33Q8WU49 177 aa12.39□□□□□ -0.43
NAE1-222ENST00000569963 LEPROTO15243 131 aa12.38□□□□□ -0.43
NAE1-222ENST00000569963 HERVK_113P61574 105 aa12.38□□□□□ -0.43
NAE1-222ENST00000569963 COX17Q14061 63 aa12.38□□□□□ -0.43
NAE1-222ENST00000569963 C9orf129Q5T035 196 aaKnown RBP12.38□□□□□ -0.43
NAE1-222ENST00000569963 KRTDAPP60985 99 aa12.37□□□□□ -0.43
NAE1-222ENST00000569963 HIST3H2BBQ8N257 126 aa12.37□□□□□ -0.43
NAE1-222ENST00000569963 PLEKHB2Q96CS7 222 aa12.37□□□□□ -0.43
NAE1-222ENST00000569963 ERG28Q9UKR5 140 aa12.37□□□□□ -0.43
NAE1-222ENST00000569963 VPS13BQ7Z7G8 4022 aa12.37□□□□□ -0.43
NAE1-222ENST00000569963 KRTAP10-4P60372 401 aaPredicted RBP12.36□□□□□ -0.43
NAE1-222ENST00000569963 RPL37AP61513 92 aaKnown RBP12.36□□□□□ -0.43
NAE1-222ENST00000569963 FAM168BA1KXE4 195 aa12.34□□□□□ -0.43
NAE1-222ENST00000569963 S100A2P29034 98 aa12.34□□□□□ -0.43
NAE1-222ENST00000569963 HERV-K104P63124 156 aa12.34□□□□□ -0.43
NAE1-222ENST00000569963 SRRM2Q9UQ35 2752 aaKnown RBP12.33□□□□□ -0.44
NAE1-222ENST00000569963 MYMXA0A1B0GTQ4 84 aa12.33□□□□□ -0.44
NAE1-222ENST00000569963 PFN2P35080 140 aa12.33□□□□□ -0.44
NAE1-222ENST00000569963 HIST1H2BLQ99880 126 aa12.33□□□□□ -0.44
NAE1-222ENST00000569963 XAGE1AQ9HD64 81 aa12.33□□□□□ -0.44
NAE1-222ENST00000569963 NDUFA12Q9UI09 145 aa12.33□□□□□ -0.44
NAE1-222ENST00000569963 ABCA13Q86UQ4 5058 aa12.32□□□□□ -0.44
NAE1-222ENST00000569963 C20orf202A1L168 122 aa12.32□□□□□ -0.44
NAE1-222ENST00000569963 E9PLD3 99 aa12.32□□□□□ -0.44
NAE1-222ENST00000569963 J3QQQ9 107 aa12.32□□□□□ -0.44
NAE1-222ENST00000569963 AKR1D1P51857 326 aa12.32□□□□□ -0.44
NAE1-222ENST00000569963 FAM19A5Q7Z5A7 132 aaPredicted RBP12.32□□□□□ -0.44
NAE1-222ENST00000569963 KRTAP7-1Q8IUC3 87 aa12.32□□□□□ -0.44
NAE1-222ENST00000569963 LINC00587B1AMM8 73 aa12.31□□□□□ -0.44
NAE1-222ENST00000569963 NMUP48645 174 aa12.31□□□□□ -0.44
NAE1-222ENST00000569963 TSPEAR-AS2P59090 65 aa12.31□□□□□ -0.44
NAE1-222ENST00000569963 PLA2G2DQ9UNK4 145 aa12.31□□□□□ -0.44
NAE1-222ENST00000569963 INAFM2P0DMQ5 153 aa12.3□□□□□ -0.44
NAE1-222ENST00000569963 SNRPEP62304 92 aaKnown RBP12.3□□□□□ -0.44
NAE1-222ENST00000569963 PHF5AQ7RTV0 110 aaKnown RBP12.3□□□□□ -0.44
NAE1-222ENST00000569963 C5orf52A6NGY3 159 aa12.29□□□□□ -0.44
NAE1-222ENST00000569963 M0QXV9 152 aa12.28□□□□□ -0.44
NAE1-222ENST00000569963 LGALS3P17931 250 aaKnown RBP12.28□□□□□ -0.44
NAE1-222ENST00000569963 PCLOQ9Y6V0 5065 aa12.28□□□□□ -0.44
NAE1-222ENST00000569963 LINC00158P58513 81 aa12.27□□□□□ -0.45
NAE1-222ENST00000569963 SERTAD4-AS1Q5TG53 156 aa12.27□□□□□ -0.45
NAE1-222ENST00000569963 SND1-IT1Q9HBX3 110 aa12.27□□□□□ -0.45
NAE1-222ENST00000569963 TP73-AS1Q9UF72 201 aa12.27□□□□□ -0.45
NAE1-222ENST00000569963 PRR3P79522 188 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms