RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 LINC00526Q96FQ7 95 aa15.21■□□□□ 0.03
RAB40C-212ENST00000569575 FRAS1Q86XX4 4008 aa15.21■□□□□ 0.02
RAB40C-212ENST00000569575 GCSHP23434 173 aa15.2■□□□□ 0.02
RAB40C-212ENST00000569575 HERV-K104P63124 156 aa15.2■□□□□ 0.02
RAB40C-212ENST00000569575 Q6ZRU5 148 aa15.2■□□□□ 0.02
RAB40C-212ENST00000569575 LINC00587B1AMM8 73 aa15.19■□□□□ 0.02
RAB40C-212ENST00000569575 J3QQQ9 107 aa15.19■□□□□ 0.02
RAB40C-212ENST00000569575 DNAH10Q8IVF4 4471 aa15.19■□□□□ 0.02
RAB40C-212ENST00000569575 LGALS3P17931 250 aaKnown RBP15.18■□□□□ 0.02
RAB40C-212ENST00000569575 UNQ6190/PRO20217Q6UXQ8 127 aa15.18■□□□□ 0.02
RAB40C-212ENST00000569575 RYR3Q15413 4870 aa15.17■□□□□ 0.02
RAB40C-212ENST00000569575 MYMXA0A1B0GTQ4 84 aa15.17■□□□□ 0.02
RAB40C-212ENST00000569575 TLX1NBP0CAT3 122 aa15.17■□□□□ 0.02
RAB40C-212ENST00000569575 C2orf82Q6UX34 121 aa15.17■□□□□ 0.02
RAB40C-212ENST00000569575 STPG4Q8N801 248 aa15.17■□□□□ 0.02
RAB40C-212ENST00000569575 COX17Q14061 63 aa15.16■□□□□ 0.02
RAB40C-212ENST00000569575 ZNF625Q96I27 306 aaPredicted RBP15.16■□□□□ 0.02
RAB40C-212ENST00000569575 C6orf48Q9UBA6 75 aa15.15■□□□□ 0.02
RAB40C-212ENST00000569575 NDUFA12Q9UI09 145 aa15.15■□□□□ 0.02
RAB40C-212ENST00000569575 LOC107984640A0A0U1RRK4 108 aa15.14■□□□□ 0.01
RAB40C-212ENST00000569575 C16orf90A8MZG2 172 aa15.14■□□□□ 0.01
RAB40C-212ENST00000569575 C10orf25Q5T742 122 aa15.14■□□□□ 0.01
RAB40C-212ENST00000569575 SDIM1Q6ZPB5 146 aa15.14■□□□□ 0.01
RAB40C-212ENST00000569575 ATOH7Q8N100 152 aa15.14■□□□□ 0.01
RAB40C-212ENST00000569575 LINC00474Q9P2X8 69 aa15.14■□□□□ 0.01
RAB40C-212ENST00000569575 FAT2Q9NYQ8 4349 aa15.13■□□□□ 0.01
RAB40C-212ENST00000569575 NDUFC2-KCTD14E9PQ53 114 aa15.11■□□□□ 0.01
RAB40C-212ENST00000569575 TSPEAR-AS2P59090 65 aa15.08■□□□□ 0
RAB40C-212ENST00000569575 ANKRD39Q53RE8 183 aa15.08■□□□□ 0
RAB40C-212ENST00000569575 PYY3Q5JQD4 70 aa15.08■□□□□ 0
RAB40C-212ENST00000569575 ERG28Q9UKR5 140 aa15.07■□□□□ 0
RAB40C-212ENST00000569575 IGKV2D-26A0A0A0MRZ7 120 aa15.06■□□□□ 0
RAB40C-212ENST00000569575 CIRBPQ14011 172 aaKnown RBP15.06■□□□□ 0
RAB40C-212ENST00000569575 VAMP8Q9BV40 100 aa15.06■□□□□ 0
RAB40C-212ENST00000569575 FUSP35637 526 aaKnown RBP eCLIP15.04■□□□□ -02e-6■■■□□ 19.1
RAB40C-212ENST00000569575 PTTG1IPP53801 180 aa15.04■□□□□ -0
RAB40C-212ENST00000569575 ZNF815PA8K554 130 aa15.03■□□□□ -0
RAB40C-212ENST00000569575 KRTAP10-1P60331 282 aa15.03■□□□□ -0
RAB40C-212ENST00000569575 Q6ZSA8 131 aa15.03■□□□□ -0
RAB40C-212ENST00000569575 RPL18AQ02543 176 aaKnown RBP15.02■□□□□ -0
RAB40C-212ENST00000569575 MAJINQ3KP22 176 aa15.02■□□□□ -0
RAB40C-212ENST00000569575 C9orf116Q5BN46 136 aaPredicted RBP15.02■□□□□ -0
RAB40C-212ENST00000569575 MEIG1Q5JSS6 88 aa15.02■□□□□ -0
RAB40C-212ENST00000569575 PKD1P98161 4303 aa15.02□□□□□ -0.01
RAB40C-212ENST00000569575 TIMM17BO60830 172 aa15.01□□□□□ -0.01
RAB40C-212ENST00000569575 LINC01620Q4KN68 170 aa15.01□□□□□ -0.01
RAB40C-212ENST00000569575 Q6ZRP5 223 aa15.01□□□□□ -0.01
RAB40C-212ENST00000569575 S100A12P80511 92 aa15□□□□□ -0.01
RAB40C-212ENST00000569575 A0A096LNI7 61 aa14.99□□□□□ -0.01
RAB40C-212ENST00000569575 A0A0J9YXY3 114 aa14.99□□□□□ -0.01
RAB40C-212ENST00000569575 PFN2P35080 140 aa14.99□□□□□ -0.01
RAB40C-212ENST00000569575 LINC00158P58513 81 aa14.99□□□□□ -0.01
RAB40C-212ENST00000569575 GAGE2BQ13066 116 aa14.99□□□□□ -0.01
RAB40C-212ENST00000569575 LOC105371267A0A1B0GV96 52 aa14.98□□□□□ -0.01
RAB40C-212ENST00000569575 DLEU1O43261 78 aa14.98□□□□□ -0.01
RAB40C-212ENST00000569575 SMIM6P0DI80 62 aa14.98□□□□□ -0.01
RAB40C-212ENST00000569575 SPACA4Q8TDM5 124 aa14.98□□□□□ -0.01
RAB40C-212ENST00000569575 SPATA45Q537H7 98 aa14.97□□□□□ -0.01
RAB40C-212ENST00000569575 COX8AP10176 69 aa14.96□□□□□ -0.01
RAB40C-212ENST00000569575 SCGB1D4Q6XE38 83 aa14.96□□□□□ -0.01
RAB40C-212ENST00000569575 PCP2Q8IVA1 136 aa14.96□□□□□ -0.01
RAB40C-212ENST00000569575 PAM16Q9Y3D7 125 aa14.96□□□□□ -0.01
RAB40C-212ENST00000569575 SMIM13P0DJ93 91 aa14.95□□□□□ -0.02
RAB40C-212ENST00000569575 GAGE2EQ4V326 116 aa14.95□□□□□ -0.02
RAB40C-212ENST00000569575 BOD1L2Q8IYS8 172 aa14.95□□□□□ -0.02
RAB40C-212ENST00000569575 DPH3Q96FX2 82 aa14.95□□□□□ -0.02
RAB40C-212ENST00000569575 GAGE2DQ9UEU5 116 aa14.95□□□□□ -0.02
RAB40C-212ENST00000569575 IGKV2-24A0A0C4DH68 120 aa14.94□□□□□ -0.02
RAB40C-212ENST00000569575 Q6ZVH6 145 aa14.94□□□□□ -0.02
RAB40C-212ENST00000569575 DNAH11Q96DT5 4516 aa14.94□□□□□ -0.02
RAB40C-212ENST00000569575 TMEM238C9JI98 176 aa14.93□□□□□ -0.02
RAB40C-212ENST00000569575 CDK2AP2O75956 126 aa14.93□□□□□ -0.02
RAB40C-212ENST00000569575 COPS9Q8WXC6 57 aa14.93□□□□□ -0.02
RAB40C-212ENST00000569575 PLA2G2DQ9UNK4 145 aa14.93□□□□□ -0.02
RAB40C-212ENST00000569575 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.93□□□□□ -0.02
RAB40C-212ENST00000569575 HECTD4Q9Y4D8 3996 aa14.92□□□□□ -0.02
RAB40C-212ENST00000569575 LOC107984156A0A0G2JMH3 177 aa14.92□□□□□ -0.02
RAB40C-212ENST00000569575 ARL17AQ8IVW1 177 aa14.92□□□□□ -0.02
RAB40C-212ENST00000569575 TTTY13Q9BZ97 58 aa14.92□□□□□ -0.02
RAB40C-212ENST00000569575 SND1-IT1Q9HBX3 110 aa14.92□□□□□ -0.02
RAB40C-212ENST00000569575 EPM2AB3EWF7 344 aa14.91□□□□□ -0.02
RAB40C-212ENST00000569575 MIR7-3HGQ8N6C7 128 aa14.91□□□□□ -0.02
RAB40C-212ENST00000569575 PLAC8Q9NZF1 115 aa14.91□□□□□ -0.02
RAB40C-212ENST00000569575 PPDPFQ9H3Y8 114 aa14.9□□□□□ -0.02
RAB40C-212ENST00000569575 FAM30AQ9NZY2 134 aa14.9□□□□□ -0.02
RAB40C-212ENST00000569575 CHTF8P0CG12 524 aa14.89□□□□□ -0.03
RAB40C-212ENST00000569575 C9orf129Q5T035 196 aaKnown RBP14.89□□□□□ -0.03
RAB40C-212ENST00000569575 A0A087WYN8 130 aa14.88□□□□□ -0.03
RAB40C-212ENST00000569575 RPL24P83731 157 aaKnown RBP14.88□□□□□ -0.03
RAB40C-212ENST00000569575 SLC25A34Q6PIV7 304 aa14.88□□□□□ -0.03
RAB40C-212ENST00000569575 XAGE1AQ9HD64 81 aa14.88□□□□□ -0.03
RAB40C-212ENST00000569575 LITAFQ99732 161 aa14.87□□□□□ -0.03
RAB40C-212ENST00000569575 MIEN1Q9BRT3 115 aa14.87□□□□□ -0.03
RAB40C-212ENST00000569575 SPANXDQ9BXN6 97 aa14.87□□□□□ -0.03
RAB40C-212ENST00000569575 SPANXCQ9NY87 97 aa14.87□□□□□ -0.03
RAB40C-212ENST00000569575 A0A0U1RRA0 63 aa14.86□□□□□ -0.03
RAB40C-212ENST00000569575 PANO1I0J062 215 aa14.86□□□□□ -0.03
RAB40C-212ENST00000569575 IFITM1P13164 125 aa14.86□□□□□ -0.03
RAB40C-212ENST00000569575 CIRBP-AS1Q8TBR5 109 aa14.85□□□□□ -0.03
RAB40C-212ENST00000569575 C14orf144Q96I85 54 aa14.85□□□□□ -0.03
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