RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-223ENST00000568499 Q6ZRU5 148 aa9.65□□□□□ -0.86
KLHDC4-223ENST00000568499 PKD1P98161 4303 aa9.64□□□□□ -0.87
KLHDC4-223ENST00000568499 TRBV30A0A0K0K1B3 111 aa9.64□□□□□ -0.87
KLHDC4-223ENST00000568499 UNQ6190/PRO20217Q6UXQ8 127 aa9.64□□□□□ -0.87
KLHDC4-223ENST00000568499 HECTD4Q9Y4D8 3996 aa9.63□□□□□ -0.87
KLHDC4-223ENST00000568499 C2orf82Q6UX34 121 aa9.63□□□□□ -0.87
KLHDC4-223ENST00000568499 PLEKHB2Q96CS7 222 aa9.63□□□□□ -0.87
KLHDC4-223ENST00000568499 LOC107984640A0A0U1RRK4 108 aa9.62□□□□□ -0.87
KLHDC4-223ENST00000568499 KRTAP10-1P60331 282 aa9.62□□□□□ -0.87
KLHDC4-223ENST00000568499 LINC01620Q4KN68 170 aa9.62□□□□□ -0.87
KLHDC4-223ENST00000568499 SDIM1Q6ZPB5 146 aa9.61□□□□□ -0.87
KLHDC4-223ENST00000568499 DPH3Q96FX2 82 aa9.61□□□□□ -0.87
KLHDC4-223ENST00000568499 LINC00474Q9P2X8 69 aa9.61□□□□□ -0.87
KLHDC4-223ENST00000568499 DNAH11Q96DT5 4516 aa9.61□□□□□ -0.87
KLHDC4-223ENST00000568499 LEPROTO15243 131 aa9.6□□□□□ -0.87
KLHDC4-223ENST00000568499 C10orf25Q5T742 122 aa9.6□□□□□ -0.87
KLHDC4-223ENST00000568499 C6orf48Q9UBA6 75 aa9.6□□□□□ -0.87
KLHDC4-223ENST00000568499 SCGB1D1O95968 90 aa9.59□□□□□ -0.87
KLHDC4-223ENST00000568499 LGALS3P17931 250 aaKnown RBP9.59□□□□□ -0.87
KLHDC4-223ENST00000568499 HSBP1L1C9JCN9 74 aa9.58□□□□□ -0.88
KLHDC4-223ENST00000568499 RPL18AQ02543 176 aaKnown RBP9.58□□□□□ -0.88
KLHDC4-223ENST00000568499 MYMXA0A1B0GTQ4 84 aa9.57□□□□□ -0.88
KLHDC4-223ENST00000568499 LINC00587B1AMM8 73 aa9.57□□□□□ -0.88
KLHDC4-223ENST00000568499 E9PLD3 99 aa9.57□□□□□ -0.88
KLHDC4-223ENST00000568499 J3QQQ9 107 aa9.57□□□□□ -0.88
KLHDC4-223ENST00000568499 TLX1NBP0CAT3 122 aa9.57□□□□□ -0.88
KLHDC4-223ENST00000568499 NMUP48645 174 aa9.57□□□□□ -0.88
KLHDC4-223ENST00000568499 HERV-K104P63124 156 aa9.57□□□□□ -0.88
KLHDC4-223ENST00000568499 GAGE2BQ13066 116 aa9.57□□□□□ -0.88
KLHDC4-223ENST00000568499 IGKV2-24A0A0C4DH68 120 aa9.56□□□□□ -0.88
KLHDC4-223ENST00000568499 NDUFC2-KCTD14E9PQ53 114 aa9.56□□□□□ -0.88
KLHDC4-223ENST00000568499 STPG4Q8N801 248 aa9.56□□□□□ -0.88
KLHDC4-223ENST00000568499 NDUFA12Q9UI09 145 aa9.56□□□□□ -0.88
KLHDC4-223ENST00000568499 PTTG1IPP53801 180 aa9.55□□□□□ -0.88
KLHDC4-223ENST00000568499 COX17Q14061 63 aa9.55□□□□□ -0.88
KLHDC4-223ENST00000568499 ATOH7Q8N100 152 aa9.55□□□□□ -0.88
KLHDC4-223ENST00000568499 PKHD1P08F94 4074 aa9.55□□□□□ -0.88
KLHDC4-223ENST00000568499 CDK2AP2O75956 126 aa9.54□□□□□ -0.88
KLHDC4-223ENST00000568499 MAJINQ3KP22 176 aa9.54□□□□□ -0.88
KLHDC4-223ENST00000568499 C9orf116Q5BN46 136 aaPredicted RBP9.54□□□□□ -0.88
KLHDC4-223ENST00000568499 Q6ZSA8 131 aa9.54□□□□□ -0.88
KLHDC4-223ENST00000568499 ZNF625Q96I27 306 aaPredicted RBP9.54□□□□□ -0.88
KLHDC4-223ENST00000568499 A0A096LNI7 61 aa9.53□□□□□ -0.88
KLHDC4-223ENST00000568499 GAGE2EQ4V326 116 aa9.53□□□□□ -0.88
KLHDC4-223ENST00000568499 GAGE2DQ9UEU5 116 aa9.53□□□□□ -0.88
KLHDC4-223ENST00000568499 ERG28Q9UKR5 140 aa9.53□□□□□ -0.88
KLHDC4-223ENST00000568499 PFN2P35080 140 aa9.52□□□□□ -0.89
KLHDC4-223ENST00000568499 MEIG1Q5JSS6 88 aa9.52□□□□□ -0.89
KLHDC4-223ENST00000568499 Q6ZRP5 223 aa9.52□□□□□ -0.89
KLHDC4-223ENST00000568499 SPACA4Q8TDM5 124 aa9.52□□□□□ -0.89
KLHDC4-223ENST00000568499 FAM30AQ9NZY2 134 aa9.52□□□□□ -0.89
KLHDC4-223ENST00000568499 DNAH5Q8TE73 4624 aa9.52□□□□□ -0.89
KLHDC4-223ENST00000568499 EPPK1P58107 5090 aaKnown RBP9.51□□□□□ -0.89
KLHDC4-223ENST00000568499 CHTF8P0CG12 524 aa9.51□□□□□ -0.89
KLHDC4-223ENST00000568499 LINC00158P58513 81 aa9.51□□□□□ -0.89
KLHDC4-223ENST00000568499 CIRBPQ14011 172 aaKnown RBP9.51□□□□□ -0.89
KLHDC4-223ENST00000568499 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.51□□□□□ -0.89
KLHDC4-223ENST00000568499 TSPEAR-AS2P59090 65 aa9.5□□□□□ -0.89
KLHDC4-223ENST00000568499 JOSD1Q15040 202 aaPredicted RBP9.49□□□□□ -0.89
KLHDC4-223ENST00000568499 DYNC1H1Q14204 4646 aaKnown RBP9.48□□□□□ -0.89
KLHDC4-223ENST00000568499 A0A087WYN8 130 aa9.48□□□□□ -0.89
KLHDC4-223ENST00000568499 ZNF815PA8K554 130 aa9.48□□□□□ -0.89
KLHDC4-223ENST00000568499 SCXQ7RTU7 201 aa9.48□□□□□ -0.89
KLHDC4-223ENST00000568499 CIRBP-AS1Q8TBR5 109 aa9.48□□□□□ -0.89
KLHDC4-223ENST00000568499 PANO1I0J062 215 aa9.47□□□□□ -0.89
KLHDC4-223ENST00000568499 XGP55808 180 aa9.47□□□□□ -0.89
KLHDC4-223ENST00000568499 ANKRD39Q53RE8 183 aa9.47□□□□□ -0.89
KLHDC4-223ENST00000568499 PLAC8Q9NZF1 115 aa9.47□□□□□ -0.89
KLHDC4-223ENST00000568499 LRP1BQ9NZR2 4599 aa9.47□□□□□ -0.89
KLHDC4-223ENST00000568499 IGKV2D-26A0A0A0MRZ7 120 aa9.46□□□□□ -0.9
KLHDC4-223ENST00000568499 SMIM13P0DJ93 91 aa9.46□□□□□ -0.9
KLHDC4-223ENST00000568499 XAGE1AQ9HD64 81 aa9.46□□□□□ -0.9
KLHDC4-223ENST00000568499 A0A0U1RRA0 63 aa9.45□□□□□ -0.9
KLHDC4-223ENST00000568499 SCGB1D4Q6XE38 83 aa9.45□□□□□ -0.9
KLHDC4-223ENST00000568499 A0A0J9YXY3 114 aa9.44□□□□□ -0.9
KLHDC4-223ENST00000568499 HAMPP81172 84 aa9.44□□□□□ -0.9
KLHDC4-223ENST00000568499 VAMP8Q9BV40 100 aa9.44□□□□□ -0.9
KLHDC4-223ENST00000568499 SND1-IT1Q9HBX3 110 aa9.44□□□□□ -0.9
KLHDC4-223ENST00000568499 C9orf129Q5T035 196 aaKnown RBP9.43□□□□□ -0.9
KLHDC4-223ENST00000568499 MIR7-3HGQ8N6C7 128 aa9.43□□□□□ -0.9
KLHDC4-223ENST00000568499 A0A1W2PNN7 141 aa9.42□□□□□ -0.9
KLHDC4-223ENST00000568499 TIMM17BO60830 172 aa9.42□□□□□ -0.9
KLHDC4-223ENST00000568499 RPL24P83731 157 aaKnown RBP9.42□□□□□ -0.9
KLHDC4-223ENST00000568499 FAM19A5Q7Z5A7 132 aaPredicted RBP9.42□□□□□ -0.9
KLHDC4-223ENST00000568499 C7orf33Q8WU49 177 aa9.42□□□□□ -0.9
KLHDC4-223ENST00000568499 MIEN1Q9BRT3 115 aa9.42□□□□□ -0.9
KLHDC4-223ENST00000568499 PLA2G2DQ9UNK4 145 aa9.41□□□□□ -0.9
KLHDC4-223ENST00000568499 TMEM238C9JI98 176 aa9.4□□□□□ -0.9
KLHDC4-223ENST00000568499 FAM229AH3BQW9 127 aa9.4□□□□□ -0.9
KLHDC4-223ENST00000568499 SPATA45Q537H7 98 aa9.4□□□□□ -0.9
KLHDC4-223ENST00000568499 LBHQ53QV2 105 aaPredicted RBP9.4□□□□□ -0.9
KLHDC4-223ENST00000568499 PYY3Q5JQD4 70 aa9.4□□□□□ -0.9
KLHDC4-223ENST00000568499 PCP2Q8IVA1 136 aa9.4□□□□□ -0.9
KLHDC4-223ENST00000568499 NKAPP1Q8N9T2 125 aa9.4□□□□□ -0.9
KLHDC4-223ENST00000568499 TTTY13Q9BZ97 58 aa9.4□□□□□ -0.9
KLHDC4-223ENST00000568499 PAM16Q9Y3D7 125 aa9.4□□□□□ -0.9
KLHDC4-223ENST00000568499 FAM168BA1KXE4 195 aa9.39□□□□□ -0.91
KLHDC4-223ENST00000568499 S100A12P80511 92 aa9.39□□□□□ -0.91
KLHDC4-223ENST00000568499 COPS9Q8WXC6 57 aa9.39□□□□□ -0.91
KLHDC4-223ENST00000568499 BIRC6Q9NR09 4857 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms