RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 Q6ZRP5 223 aa2.94□□□□□ -1.94
HERPUD1-213ENST00000568358 AMN1Q8IY45 258 aa2.94□□□□□ -1.94
HERPUD1-213ENST00000568358 NUP35Q8NFH5 326 aa2.94□□□□□ -1.94
HERPUD1-213ENST00000568358 CAMK2N2Q96S95 79 aa2.94□□□□□ -1.94
HERPUD1-213ENST00000568358 MYCBP2O75592 4640 aa2.94□□□□□ -1.94
HERPUD1-213ENST00000568358 DNAH8Q96JB1 4490 aa2.93□□□□□ -1.94
HERPUD1-213ENST00000568358 IGLV4-69A0A075B6H9 119 aa2.93□□□□□ -1.94
HERPUD1-213ENST00000568358 A0A096LNI7 61 aa2.93□□□□□ -1.94
HERPUD1-213ENST00000568358 SRP19P09132 144 aaKnown RBP2.93□□□□□ -1.94
HERPUD1-213ENST00000568358 ADIRFQ15847 76 aa2.93□□□□□ -1.94
HERPUD1-213ENST00000568358 C4orf26Q17RF5 130 aa2.93□□□□□ -1.94
HERPUD1-213ENST00000568358 SPINK6Q6UWN8 80 aa2.93□□□□□ -1.94
HERPUD1-213ENST00000568358 LINC00526Q96FQ7 95 aa2.93□□□□□ -1.94
HERPUD1-213ENST00000568358 C20orf78Q9BR46 151 aa2.93□□□□□ -1.94
HERPUD1-213ENST00000568358 SMDT1Q9H4I9 107 aa2.93□□□□□ -1.94
HERPUD1-213ENST00000568358 NAT8Q9UHE5 227 aa2.93□□□□□ -1.94
HERPUD1-213ENST00000568358 V9GYV3 84 aa2.93□□□□□ -1.94
HERPUD1-213ENST00000568358 SMIM27A0A1W2PRY6 76 aa2.92□□□□□ -1.94
HERPUD1-213ENST00000568358 GAS8-AS1O95177 125 aa2.92□□□□□ -1.94
HERPUD1-213ENST00000568358 PPBPP02775 128 aa2.92□□□□□ -1.94
HERPUD1-213ENST00000568358 RPL23P62829 140 aaKnown RBP2.92□□□□□ -1.94
HERPUD1-213ENST00000568358 MRPL51Q4U2R6 128 aaKnown RBP2.92□□□□□ -1.94
HERPUD1-213ENST00000568358 FAM104BQ5XKR9 115 aa2.92□□□□□ -1.94
HERPUD1-213ENST00000568358 C5orf38Q86SI9 138 aa2.92□□□□□ -1.94
HERPUD1-213ENST00000568358 LINC01600Q96MT4 127 aa2.92□□□□□ -1.94
HERPUD1-213ENST00000568358 IMMP2LQ96T52 175 aa2.92□□□□□ -1.94
HERPUD1-213ENST00000568358 HIST1H4GQ99525 98 aa2.92□□□□□ -1.94
HERPUD1-213ENST00000568358 TIMM21Q9BVV7 248 aa2.92□□□□□ -1.94
HERPUD1-213ENST00000568358 UBE2D4Q9Y2X8 147 aa2.92□□□□□ -1.94
HERPUD1-213ENST00000568358 TRBV24-1A0A075B6N3 115 aa2.91□□□□□ -1.94
HERPUD1-213ENST00000568358 TGIF2-C20orf24A0A0A6YYL0 155 aa2.91□□□□□ -1.94
HERPUD1-213ENST00000568358 IGHV3OR16-9A0A0B4J2B5 98 aa2.91□□□□□ -1.94
HERPUD1-213ENST00000568358 FAM240AA0A1B0GVK7 77 aa2.91□□□□□ -1.94
HERPUD1-213ENST00000568358 NDUFA1O15239 70 aa2.91□□□□□ -1.94
HERPUD1-213ENST00000568358 MT-ND6P03923 174 aa2.91□□□□□ -1.94
HERPUD1-213ENST00000568358 RPL32P62910 135 aaKnown RBP2.91□□□□□ -1.94
HERPUD1-213ENST00000568358 HBBP68871 147 aa2.91□□□□□ -1.94
HERPUD1-213ENST00000568358 RNASE13Q5GAN3 156 aaKnown RBP2.91□□□□□ -1.94
HERPUD1-213ENST00000568358 NRACQ8N912 160 aa2.91□□□□□ -1.94
HERPUD1-213ENST00000568358 OR10D4PQ8NGN7 298 aa2.91□□□□□ -1.94
HERPUD1-213ENST00000568358 PRAC1Q96KF2 57 aa2.91□□□□□ -1.94
HERPUD1-213ENST00000568358 SPANXA1Q9NS26 97 aa2.91□□□□□ -1.94
HERPUD1-213ENST00000568358 D6R8Y8 96 aa2.9□□□□□ -1.95
HERPUD1-213ENST00000568358 MT1HL1P0DM35 61 aa2.9□□□□□ -1.95
HERPUD1-213ENST00000568358 IFI27P40305 119 aaPredicted RBP2.9□□□□□ -1.95
HERPUD1-213ENST00000568358 SPAG11BQ08648 103 aa2.9□□□□□ -1.95
HERPUD1-213ENST00000568358 C9orf116Q5BN46 136 aaPredicted RBP2.9□□□□□ -1.95
HERPUD1-213ENST00000568358 MRPL54Q6P161 138 aaKnown RBP2.9□□□□□ -1.95
HERPUD1-213ENST00000568358 TMEM136Q6ZRR5 245 aa2.9□□□□□ -1.95
HERPUD1-213ENST00000568358 Q6ZVH6 145 aa2.9□□□□□ -1.95
HERPUD1-213ENST00000568358 ORMDL3Q8N138 153 aa2.9□□□□□ -1.95
HERPUD1-213ENST00000568358 NKAPP1Q8N9T2 125 aa2.9□□□□□ -1.95
HERPUD1-213ENST00000568358 ORAOV1Q8WV07 137 aa2.9□□□□□ -1.95
HERPUD1-213ENST00000568358 OPRPNQ99935 248 aaPredicted RBP2.9□□□□□ -1.95
HERPUD1-213ENST00000568358 SMIM2Q9BVW6 85 aa2.9□□□□□ -1.95
HERPUD1-213ENST00000568358 OCR1Q9BZK8 76 aa2.9□□□□□ -1.95
HERPUD1-213ENST00000568358 A0A0J9YXV3 536 aa2.89□□□□□ -1.95
HERPUD1-213ENST00000568358 IFITM10A6NMD0 228 aa2.89□□□□□ -1.95
HERPUD1-213ENST00000568358 SMIM1B2RUZ4 78 aa2.89□□□□□ -1.95
HERPUD1-213ENST00000568358 RPL39P62891 51 aaKnown RBP2.89□□□□□ -1.95
HERPUD1-213ENST00000568358 MRPS36P82909 103 aaKnown RBP2.89□□□□□ -1.95
HERPUD1-213ENST00000568358 C1orf137Q5JT78 98 aa2.89□□□□□ -1.95
HERPUD1-213ENST00000568358 Q6ZN92 141 aa2.89□□□□□ -1.95
HERPUD1-213ENST00000568358 Q6ZUT4 128 aa2.89□□□□□ -1.95
HERPUD1-213ENST00000568358 ATP5L2Q7Z4Y8 100 aa2.89□□□□□ -1.95
HERPUD1-213ENST00000568358 PRELID3AQ96N28 172 aa2.89□□□□□ -1.95
HERPUD1-213ENST00000568358 C2orf88Q9BSF0 95 aa2.89□□□□□ -1.95
HERPUD1-213ENST00000568358 MAP1LC3AQ9H492 121 aa2.89□□□□□ -1.95
HERPUD1-213ENST00000568358 MRPL35Q9NZE8 188 aaKnown RBP2.89□□□□□ -1.95
HERPUD1-213ENST00000568358 LOC389332A0A1B0GUA5 103 aa2.88□□□□□ -1.95
HERPUD1-213ENST00000568358 A0A1W2PNN7 141 aa2.88□□□□□ -1.95
HERPUD1-213ENST00000568358 H0Y9J4 135 aa2.88□□□□□ -1.95
HERPUD1-213ENST00000568358 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.88□□□□□ -1.95
HERPUD1-213ENST00000568358 NPYP01303 97 aa2.88□□□□□ -1.95
HERPUD1-213ENST00000568358 MT-ND4LP03901 98 aa2.88□□□□□ -1.95
HERPUD1-213ENST00000568358 CKS1BP61024 79 aa2.88□□□□□ -1.95
HERPUD1-213ENST00000568358 PRR4Q16378 134 aa2.88□□□□□ -1.95
HERPUD1-213ENST00000568358 TEX43Q6ZNM6 134 aa2.88□□□□□ -1.95
HERPUD1-213ENST00000568358 DIRC1Q969H9 104 aa2.88□□□□□ -1.95
HERPUD1-213ENST00000568358 TMEM141Q96I45 108 aa2.88□□□□□ -1.95
HERPUD1-213ENST00000568358 PSORS1C2Q9UIG4 136 aa2.88□□□□□ -1.95
HERPUD1-213ENST00000568358 LAMTOR2Q9Y2Q5 125 aa2.88□□□□□ -1.95
HERPUD1-213ENST00000568358 PYGO1Q9Y3Y4 419 aa2.88□□□□□ -1.95
HERPUD1-213ENST00000568358 LRP1Q07954 4544 aaKnown RBP2.88□□□□□ -1.95
HERPUD1-213ENST00000568358 TRBV30A0A0K0K1B3 111 aa2.87□□□□□ -1.95
HERPUD1-213ENST00000568358 C9JQL5 133 aa2.87□□□□□ -1.95
HERPUD1-213ENST00000568358 K7EMI3 77 aa2.87□□□□□ -1.95
HERPUD1-213ENST00000568358 TLX1NBP0CAT3 122 aa2.87□□□□□ -1.95
HERPUD1-213ENST00000568358 NDUFV3P56181 108 aaKnown RBP2.87□□□□□ -1.95
HERPUD1-213ENST00000568358 KRTAP10-8P60410 259 aa2.87□□□□□ -1.95
HERPUD1-213ENST00000568358 UBE2BP63146 152 aa2.87□□□□□ -1.95
HERPUD1-213ENST00000568358 SEC11AP67812 179 aa2.87□□□□□ -1.95
HERPUD1-213ENST00000568358 ORMDL2Q53FV1 153 aa2.87□□□□□ -1.95
HERPUD1-213ENST00000568358 UNQ6190/PRO20217Q6UXQ8 127 aa2.87□□□□□ -1.95
HERPUD1-213ENST00000568358 PHF5AQ7RTV0 110 aaKnown RBP2.87□□□□□ -1.95
HERPUD1-213ENST00000568358 CYSLTR1Q9Y271 337 aa2.87□□□□□ -1.95
HERPUD1-213ENST00000568358 PKHD1L1Q86WI1 4243 aa2.87□□□□□ -1.95
HERPUD1-213ENST00000568358 IGLV4-3A0A075B6K6 122 aa2.86□□□□□ -1.95
HERPUD1-213ENST00000568358 A0A1B0GXF2 115 aa2.86□□□□□ -1.95
HERPUD1-213ENST00000568358 IGLV7-43P04211 117 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms