RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 Q8IZM0 81 aa8.75□□□□□ -1.01
HERPUD1-210ENST00000565966 STPG4Q8N801 248 aa8.75□□□□□ -1.01
HERPUD1-210ENST00000565966 IFI27L1Q96BM0 104 aa8.75□□□□□ -1.01
HERPUD1-210ENST00000565966 PACRGQ96M98 296 aaPredicted RBP8.75□□□□□ -1.01
HERPUD1-210ENST00000565966 TOMM7Q9P0U1 55 aa8.75□□□□□ -1.01
HERPUD1-210ENST00000565966 C6orf48Q9UBA6 75 aa8.75□□□□□ -1.01
HERPUD1-210ENST00000565966 ATP6V1G1O75348 118 aa8.74□□□□□ -1.01
HERPUD1-210ENST00000565966 PRSS2P07478 247 aa8.74□□□□□ -1.01
HERPUD1-210ENST00000565966 KRTAP10-4P60372 401 aaPredicted RBP8.74□□□□□ -1.01
HERPUD1-210ENST00000565966 RPL37AP61513 92 aaKnown RBP8.74□□□□□ -1.01
HERPUD1-210ENST00000565966 HIST1H2BKO60814 126 aa8.73□□□□□ -1.01
HERPUD1-210ENST00000565966 HIST1H2BJP06899 126 aa8.73□□□□□ -1.01
HERPUD1-210ENST00000565966 HIST1H2BOP23527 126 aa8.73□□□□□ -1.01
HERPUD1-210ENST00000565966 HIST1H2BBP33778 126 aa8.73□□□□□ -1.01
HERPUD1-210ENST00000565966 PTTG1IPP53801 180 aa8.73□□□□□ -1.01
HERPUD1-210ENST00000565966 HIST1H2BDP58876 126 aa8.73□□□□□ -1.01
HERPUD1-210ENST00000565966 HIST1H2BCP62807 126 aa8.73□□□□□ -1.01
HERPUD1-210ENST00000565966 HIST2H2BEQ16778 126 aa8.73□□□□□ -1.01
HERPUD1-210ENST00000565966 C6orf226Q5I0X4 101 aa8.73□□□□□ -1.01
HERPUD1-210ENST00000565966 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.73□□□□□ -1.01
HERPUD1-210ENST00000565966 HIST1H2BHQ93079 126 aa8.73□□□□□ -1.01
HERPUD1-210ENST00000565966 HIST1H2BNQ99877 126 aa8.73□□□□□ -1.01
HERPUD1-210ENST00000565966 HIST1H2BMQ99879 126 aa8.73□□□□□ -1.01
HERPUD1-210ENST00000565966 TRAV12-1A0A0B4J245 112 aa8.72□□□□□ -1.01
HERPUD1-210ENST00000565966 C11orf86A6NJI1 115 aa8.72□□□□□ -1.01
HERPUD1-210ENST00000565966 SPINK8P0C7L1 97 aa8.72□□□□□ -1.01
HERPUD1-210ENST00000565966 ZNF22P17026 224 aaPredicted RBP8.72□□□□□ -1.01
HERPUD1-210ENST00000565966 GAGE2BQ13066 116 aa8.72□□□□□ -1.01
HERPUD1-210ENST00000565966 CHTOPQ9Y3Y2 248 aaKnown RBP8.72□□□□□ -1.01
HERPUD1-210ENST00000565966 TRBV30A0A0K0K1B3 111 aa8.71□□□□□ -1.02
HERPUD1-210ENST00000565966 H3BRM9 83 aa8.71□□□□□ -1.02
HERPUD1-210ENST00000565966 LEPROTL1O95214 131 aa8.71□□□□□ -1.02
HERPUD1-210ENST00000565966 CKS1BP61024 79 aa8.71□□□□□ -1.02
HERPUD1-210ENST00000565966 RPL18AQ02543 176 aaKnown RBP8.71□□□□□ -1.02
HERPUD1-210ENST00000565966 COX7B2Q8TF08 81 aa8.71□□□□□ -1.02
HERPUD1-210ENST00000565966 C7orf33Q8WU49 177 aa8.71□□□□□ -1.02
HERPUD1-210ENST00000565966 TLX1NBP0CAT3 122 aa8.7□□□□□ -1.02
HERPUD1-210ENST00000565966 CXCL5P42830 114 aa8.69□□□□□ -1.02
HERPUD1-210ENST00000565966 C9orf116Q5BN46 136 aaPredicted RBP8.69□□□□□ -1.02
HERPUD1-210ENST00000565966 Q6ZRP5 223 aa8.69□□□□□ -1.02
HERPUD1-210ENST00000565966 MYCBP2O75592 4640 aa8.68□□□□□ -1.02
HERPUD1-210ENST00000565966 IGLV5-39A0A0G2JS06 123 aa8.68□□□□□ -1.02
HERPUD1-210ENST00000565966 F8VRH5 84 aa8.68□□□□□ -1.02
HERPUD1-210ENST00000565966 FABP4P15090 132 aa8.68□□□□□ -1.02
HERPUD1-210ENST00000565966 TMEM170BQ5T4T1 132 aa8.68□□□□□ -1.02
HERPUD1-210ENST00000565966 NDUFC2-KCTD14E9PQ53 114 aa8.67□□□□□ -1.02
HERPUD1-210ENST00000565966 H0Y8G0 127 aa8.67□□□□□ -1.02
HERPUD1-210ENST00000565966 ODF1Q14990 250 aa8.67□□□□□ -1.02
HERPUD1-210ENST00000565966 HSPB8Q9UJY1 196 aa8.67□□□□□ -1.02
HERPUD1-210ENST00000565966 A0A1W2PNN7 141 aa8.66□□□□□ -1.02
HERPUD1-210ENST00000565966 GAGE2EQ4V326 116 aa8.66□□□□□ -1.02
HERPUD1-210ENST00000565966 GAGE2DQ9UEU5 116 aa8.66□□□□□ -1.02
HERPUD1-210ENST00000565966 DMBT1Q9UGM3 2413 aaPredicted RBP8.66□□□□□ -1.02
HERPUD1-210ENST00000565966 TMEM223A0PJW6 202 aa8.64□□□□□ -1.03
HERPUD1-210ENST00000565966 KRTAP29-1A8MX34 341 aaPredicted RBP8.64□□□□□ -1.03
HERPUD1-210ENST00000565966 HNRNPA3P51991 378 aaKnown RBP8.64□□□□□ -1.03
HERPUD1-210ENST00000565966 COA6Q5JTJ3 125 aaKnown RBP8.64□□□□□ -1.03
HERPUD1-210ENST00000565966 PKHD1L1Q86WI1 4243 aa8.64□□□□□ -1.03
HERPUD1-210ENST00000565966 FAM168BA1KXE4 195 aa8.62□□□□□ -1.03
HERPUD1-210ENST00000565966 J3QL48 77 aa8.62□□□□□ -1.03
HERPUD1-210ENST00000565966 C9orf129Q5T035 196 aaKnown RBP8.62□□□□□ -1.03
HERPUD1-210ENST00000565966 OXTP01178 125 aa8.61□□□□□ -1.03
HERPUD1-210ENST00000565966 PMCHL2Q9BQD1 86 aa8.61□□□□□ -1.03
HERPUD1-210ENST00000565966 MAP1LC3CQ9BXW4 147 aa8.61□□□□□ -1.03
HERPUD1-210ENST00000565966 LRP1Q07954 4544 aaKnown RBP8.6□□□□□ -1.03
HERPUD1-210ENST00000565966 PLNP26678 52 aa8.6□□□□□ -1.03
HERPUD1-210ENST00000565966 PRR3P79522 188 aaKnown RBP8.6□□□□□ -1.03
HERPUD1-210ENST00000565966 KRTAP7-1Q8IUC3 87 aa8.6□□□□□ -1.03
HERPUD1-210ENST00000565966 DPM2O94777 84 aa8.59□□□□□ -1.03
HERPUD1-210ENST00000565966 PHF5AQ7RTV0 110 aaKnown RBP8.59□□□□□ -1.03
HERPUD1-210ENST00000565966 FAM19A5Q7Z5A7 132 aaPredicted RBP8.59□□□□□ -1.03
HERPUD1-210ENST00000565966 ZNF625Q96I27 306 aaPredicted RBP8.59□□□□□ -1.03
HERPUD1-210ENST00000565966 XAGE1AQ9HD64 81 aa8.59□□□□□ -1.03
HERPUD1-210ENST00000565966 FAT3Q8TDW7 4589 aa8.58□□□□□ -1.04
HERPUD1-210ENST00000565966 SYS1-DBNDD2H3BUS1 97 aa8.58□□□□□ -1.04
HERPUD1-210ENST00000565966 IGKCP01834 107 aa8.57□□□□□ -1.04
HERPUD1-210ENST00000565966 SFTA2Q6UW10 78 aa8.57□□□□□ -1.04
HERPUD1-210ENST00000565966 PFN2P35080 140 aa8.56□□□□□ -1.04
HERPUD1-210ENST00000565966 SERTAD4-AS1Q5TG53 156 aa8.56□□□□□ -1.04
HERPUD1-210ENST00000565966 ERG28Q9UKR5 140 aa8.56□□□□□ -1.04
HERPUD1-210ENST00000565966 M0QXV9 152 aa8.55□□□□□ -1.04
HERPUD1-210ENST00000565966 C3orf79P0CE67 100 aa8.55□□□□□ -1.04
HERPUD1-210ENST00000565966 LINC01545Q5VT33 79 aa8.55□□□□□ -1.04
HERPUD1-210ENST00000565966 PET117Q6UWS5 81 aa8.55□□□□□ -1.04
HERPUD1-210ENST00000565966 PSORS1C2Q9UIG4 136 aa8.55□□□□□ -1.04
HERPUD1-210ENST00000565966 LEPROTO15243 131 aa8.54□□□□□ -1.04
HERPUD1-210ENST00000565966 TSPEAR-AS2P59090 65 aa8.54□□□□□ -1.04
HERPUD1-210ENST00000565966 COX17Q14061 63 aa8.54□□□□□ -1.04
HERPUD1-210ENST00000565966 SPINK6Q6UWN8 80 aa8.54□□□□□ -1.04
HERPUD1-210ENST00000565966 KRTAP11-1Q8IUC1 163 aa8.54□□□□□ -1.04
HERPUD1-210ENST00000565966 HERVK_113P61574 105 aa8.53□□□□□ -1.04
HERPUD1-210ENST00000565966 PLEKHB2Q96CS7 222 aa8.53□□□□□ -1.04
HERPUD1-210ENST00000565966 NDUFA12Q9UI09 145 aa8.53□□□□□ -1.04
HERPUD1-210ENST00000565966 HERC1Q15751 4861 aa8.53□□□□□ -1.04
HERPUD1-210ENST00000565966 SRSF9Q13242 221 aaKnown RBP eCLIP8.52□□□□□ -1.05
HERPUD1-210ENST00000565966 PLA2G2DQ9UNK4 145 aa8.52□□□□□ -1.05
HERPUD1-210ENST00000565966 C22orf24Q9Y442 160 aa8.52□□□□□ -1.05
HERPUD1-210ENST00000565966 MYMXA0A1B0GTQ4 84 aa8.51□□□□□ -1.05
HERPUD1-210ENST00000565966 J3QQQ9 107 aa8.51□□□□□ -1.05
HERPUD1-210ENST00000565966 KRTDAPP60985 99 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms