RNA–Protein interactions for RNA: ENST00000563869.1

SYNGR3-203, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-203ENST00000563869 C11orf86A6NJI1 115 aa12.3□□□□□ -0.44
SYNGR3-203ENST00000563869 H0Y8G0 127 aa12.3□□□□□ -0.44
SYNGR3-203ENST00000563869 HERVK_113P61574 105 aa12.3□□□□□ -0.44
SYNGR3-203ENST00000563869 C6orf226Q5I0X4 101 aa12.3□□□□□ -0.44
SYNGR3-203ENST00000563869 C9orf163Q8N9P6 203 aa12.3□□□□□ -0.44
SYNGR3-203ENST00000563869 CARD19Q96LW7 228 aa12.3□□□□□ -0.44
SYNGR3-203ENST00000563869 ZNF22P17026 224 aaPredicted RBP12.29□□□□□ -0.44
SYNGR3-203ENST00000563869 HIST3H2BBQ8N257 126 aa12.29□□□□□ -0.44
SYNGR3-203ENST00000563869 SMIM1B2RUZ4 78 aa12.28□□□□□ -0.44
SYNGR3-203ENST00000563869 IGKCP01834 107 aa12.28□□□□□ -0.44
SYNGR3-203ENST00000563869 MYCBP2O75592 4640 aa12.28□□□□□ -0.44
SYNGR3-203ENST00000563869 VPS13BQ7Z7G8 4022 aa12.27□□□□□ -0.44
SYNGR3-203ENST00000563869 TRBV30A0A0K0K1B3 111 aa12.27□□□□□ -0.45
SYNGR3-203ENST00000563869 LINC00474Q9P2X8 69 aa12.27□□□□□ -0.45
SYNGR3-203ENST00000563869 C5orf52A6NGY3 159 aa12.26□□□□□ -0.45
SYNGR3-203ENST00000563869 KRTDAPP60985 99 aa12.26□□□□□ -0.45
SYNGR3-203ENST00000563869 LINC01545Q5VT33 79 aa12.26□□□□□ -0.45
SYNGR3-203ENST00000563869 COX7B2Q8TF08 81 aa12.26□□□□□ -0.45
SYNGR3-203ENST00000563869 TOMM7Q9P0U1 55 aa12.26□□□□□ -0.45
SYNGR3-203ENST00000563869 IGLV5-39A0A0G2JS06 123 aa12.25□□□□□ -0.45
SYNGR3-203ENST00000563869 FUSP35637 526 aaKnown RBP eCLIP12.25□□□□□ -0.45
SYNGR3-203ENST00000563869 SNRPEP62304 92 aaKnown RBP12.25□□□□□ -0.45
SYNGR3-203ENST00000563869 C3orf79P0CE67 100 aa12.24□□□□□ -0.45
SYNGR3-203ENST00000563869 HIST1H2BLQ99880 126 aa12.24□□□□□ -0.45
SYNGR3-203ENST00000563869 TMEM223A0PJW6 202 aa12.23□□□□□ -0.45
SYNGR3-203ENST00000563869 SPINK8P0C7L1 97 aa12.23□□□□□ -0.45
SYNGR3-203ENST00000563869 KIAA0087Q14695 138 aa12.23□□□□□ -0.45
SYNGR3-203ENST00000563869 PLEKHB2Q96CS7 222 aa12.22□□□□□ -0.45
SYNGR3-203ENST00000563869 LOC107984640A0A0U1RRK4 108 aa12.21□□□□□ -0.45
SYNGR3-203ENST00000563869 LINC00587B1AMM8 73 aa12.21□□□□□ -0.45
SYNGR3-203ENST00000563869 KRTAP10-1P60331 282 aa12.21□□□□□ -0.45
SYNGR3-203ENST00000563869 SLPIP03973 132 aa12.19□□□□□ -0.46
SYNGR3-203ENST00000563869 TLX1NBP0CAT3 122 aa12.19□□□□□ -0.46
SYNGR3-203ENST00000563869 Q6ZRU5 148 aa12.19□□□□□ -0.46
SYNGR3-203ENST00000563869 FLG2Q5D862 2391 aaPredicted RBP12.19□□□□□ -0.46
SYNGR3-203ENST00000563869 SMR3BP02814 79 aaPredicted RBP12.18□□□□□ -0.46
SYNGR3-203ENST00000563869 NMUP48645 174 aa12.18□□□□□ -0.46
SYNGR3-203ENST00000563869 LINC00526Q96FQ7 95 aa12.18□□□□□ -0.46
SYNGR3-203ENST00000563869 SRRM2Q9UQ35 2752 aaKnown RBP12.17□□□□□ -0.46
SYNGR3-203ENST00000563869 FAM229AH3BQW9 127 aa12.17□□□□□ -0.46
SYNGR3-203ENST00000563869 HERV-K104P63124 156 aa12.17□□□□□ -0.46
SYNGR3-203ENST00000563869 COX17Q14061 63 aa12.17□□□□□ -0.46
SYNGR3-203ENST00000563869 SDIM1Q6ZPB5 146 aa12.17□□□□□ -0.46
SYNGR3-203ENST00000563869 LEPROTO15243 131 aa12.16□□□□□ -0.46
SYNGR3-203ENST00000563869 UNQ6190/PRO20217Q6UXQ8 127 aa12.15□□□□□ -0.46
SYNGR3-203ENST00000563869 MYMXA0A1B0GTQ4 84 aa12.14□□□□□ -0.47
SYNGR3-203ENST00000563869 HSBP1L1C9JCN9 74 aa12.14□□□□□ -0.47
SYNGR3-203ENST00000563869 E9PLD3 99 aa12.14□□□□□ -0.47
SYNGR3-203ENST00000563869 NDUFC2-KCTD14E9PQ53 114 aa12.14□□□□□ -0.47
SYNGR3-203ENST00000563869 LGALS3P17931 250 aaKnown RBP12.14□□□□□ -0.47
SYNGR3-203ENST00000563869 Q6ZSA8 131 aa12.14□□□□□ -0.47
SYNGR3-203ENST00000563869 PMCHL2Q9BQD1 86 aa12.14□□□□□ -0.47
SYNGR3-203ENST00000563869 C6orf48Q9UBA6 75 aa12.14□□□□□ -0.47
SYNGR3-203ENST00000563869 C2orf82Q6UX34 121 aa12.13□□□□□ -0.47
SYNGR3-203ENST00000563869 J3QL48 77 aa12.12□□□□□ -0.47
SYNGR3-203ENST00000563869 J3QQQ9 107 aa12.12□□□□□ -0.47
SYNGR3-203ENST00000563869 PTTG1IPP53801 180 aa12.11□□□□□ -0.47
SYNGR3-203ENST00000563869 RPL18AQ02543 176 aaKnown RBP12.11□□□□□ -0.47
SYNGR3-203ENST00000563869 CIRBPQ14011 172 aaKnown RBP12.11□□□□□ -0.47
SYNGR3-203ENST00000563869 DPH3Q96FX2 82 aa12.11□□□□□ -0.47
SYNGR3-203ENST00000563869 C10orf25Q5T742 122 aa12.1□□□□□ -0.47
SYNGR3-203ENST00000563869 ZNF625Q96I27 306 aaPredicted RBP12.1□□□□□ -0.47
SYNGR3-203ENST00000563869 NDUFA12Q9UI09 145 aa12.1□□□□□ -0.47
SYNGR3-203ENST00000563869 TMA7Q9Y2S6 64 aaKnown RBP12.1□□□□□ -0.47
SYNGR3-203ENST00000563869 SCGB1D1O95968 90 aa12.08□□□□□ -0.48
SYNGR3-203ENST00000563869 HAMPP81172 84 aa12.08□□□□□ -0.48
SYNGR3-203ENST00000563869 LINC01620Q4KN68 170 aa12.08□□□□□ -0.48
SYNGR3-203ENST00000563869 SPACA4Q8TDM5 124 aa12.08□□□□□ -0.48
SYNGR3-203ENST00000563869 ERG28Q9UKR5 140 aa12.08□□□□□ -0.48
SYNGR3-203ENST00000563869 GAGE2BQ13066 116 aa12.07□□□□□ -0.48
SYNGR3-203ENST00000563869 DNAH8Q96JB1 4490 aa12.06□□□□□ -0.48
SYNGR3-203ENST00000563869 A0A096LNI7 61 aa12.05□□□□□ -0.48
SYNGR3-203ENST00000563869 IGKV2-24A0A0C4DH68 120 aa12.05□□□□□ -0.48
SYNGR3-203ENST00000563869 MAJINQ3KP22 176 aa12.05□□□□□ -0.48
SYNGR3-203ENST00000563869 MEIG1Q5JSS6 88 aa12.04□□□□□ -0.48
SYNGR3-203ENST00000563869 Q6ZRP5 223 aa12.03□□□□□ -0.48
SYNGR3-203ENST00000563869 STPG4Q8N801 248 aa12.03□□□□□ -0.48
SYNGR3-203ENST00000563869 GAGE2EQ4V326 116 aa12.02□□□□□ -0.49
SYNGR3-203ENST00000563869 PLAC8Q9NZF1 115 aa12.02□□□□□ -0.49
SYNGR3-203ENST00000563869 GAGE2DQ9UEU5 116 aa12.02□□□□□ -0.49
SYNGR3-203ENST00000563869 KRTAP29-1A8MX34 341 aaPredicted RBP12.01□□□□□ -0.49
SYNGR3-203ENST00000563869 LINC00158P58513 81 aa12.01□□□□□ -0.49
SYNGR3-203ENST00000563869 JOSD1Q15040 202 aaPredicted RBP12.01□□□□□ -0.49
SYNGR3-203ENST00000563869 C9orf116Q5BN46 136 aaPredicted RBP12.01□□□□□ -0.49
SYNGR3-203ENST00000563869 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.01□□□□□ -0.49
SYNGR3-203ENST00000563869 PFN2P35080 140 aa12□□□□□ -0.49
SYNGR3-203ENST00000563869 SCXQ7RTU7 201 aa12□□□□□ -0.49
SYNGR3-203ENST00000563869 COPS9Q8WXC6 57 aa12□□□□□ -0.49
SYNGR3-203ENST00000563869 FAM30AQ9NZY2 134 aa12□□□□□ -0.49
SYNGR3-203ENST00000563869 A0A087WYN8 130 aa11.99□□□□□ -0.49
SYNGR3-203ENST00000563869 ATOH7Q8N100 152 aa11.99□□□□□ -0.49
SYNGR3-203ENST00000563869 CIRBP-AS1Q8TBR5 109 aa11.99□□□□□ -0.49
SYNGR3-203ENST00000563869 ZNF815PA8K554 130 aa11.98□□□□□ -0.49
SYNGR3-203ENST00000563869 TIMM17BO60830 172 aa11.98□□□□□ -0.49
SYNGR3-203ENST00000563869 PLA2G1BP04054 148 aaKnown RBP11.98□□□□□ -0.49
SYNGR3-203ENST00000563869 CHTF8P0CG12 524 aa11.98□□□□□ -0.49
SYNGR3-203ENST00000563869 TSPEAR-AS2P59090 65 aa11.98□□□□□ -0.49
SYNGR3-203ENST00000563869 C7orf33Q8WU49 177 aa11.98□□□□□ -0.49
SYNGR3-203ENST00000563869 PLA2G2DQ9UNK4 145 aa11.98□□□□□ -0.49
SYNGR3-203ENST00000563869 RPL24P83731 157 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms