RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 ZNF664Q8N3J9 261 aa6.23□□□□□ -1.41
SF3B3-204ENST00000563739 Q8N8P6 123 aa6.23□□□□□ -1.41
SF3B3-204ENST00000563739 HSPB8Q9UJY1 196 aa6.23□□□□□ -1.41
SF3B3-204ENST00000563739 IGKV3OR2-268A0A0C4DH90 116 aa6.22□□□□□ -1.41
SF3B3-204ENST00000563739 ZNF25P17030 456 aaPredicted RBP6.22□□□□□ -1.41
SF3B3-204ENST00000563739 LINC00173Q6ZV60 143 aa6.22□□□□□ -1.41
SF3B3-204ENST00000563739 A0A096LNJ9 63 aa6.21□□□□□ -1.42
SF3B3-204ENST00000563739 TSTD3H0UI37 97 aa6.21□□□□□ -1.42
SF3B3-204ENST00000563739 SYS1-DBNDD2H3BUS1 97 aa6.21□□□□□ -1.42
SF3B3-204ENST00000563739 CFAP161Q6P656 301 aa6.21□□□□□ -1.42
SF3B3-204ENST00000563739 MRPL52Q86TS9 123 aaKnown RBP6.21□□□□□ -1.42
SF3B3-204ENST00000563739 CARD19Q96LW7 228 aa6.21□□□□□ -1.42
SF3B3-204ENST00000563739 MAP1LC3CQ9BXW4 147 aa6.21□□□□□ -1.42
SF3B3-204ENST00000563739 PRO1933Q9H354 126 aa6.21□□□□□ -1.42
SF3B3-204ENST00000563739 LINC00587B1AMM8 73 aa6.2□□□□□ -1.42
SF3B3-204ENST00000563739 HBDP02042 147 aa6.2□□□□□ -1.42
SF3B3-204ENST00000563739 PET117Q6UWS5 81 aa6.2□□□□□ -1.42
SF3B3-204ENST00000563739 PHF5AQ7RTV0 110 aaKnown RBP6.2□□□□□ -1.42
SF3B3-204ENST00000563739 OR5A1Q8NGJ0 315 aa6.2□□□□□ -1.42
SF3B3-204ENST00000563739 TMEM101Q96IK0 257 aa6.2□□□□□ -1.42
SF3B3-204ENST00000563739 LINC00474Q9P2X8 69 aa6.2□□□□□ -1.42
SF3B3-204ENST00000563739 A0A0U1RQV1 116 aa6.19□□□□□ -1.42
SF3B3-204ENST00000563739 C20orf202A1L168 122 aa6.19□□□□□ -1.42
SF3B3-204ENST00000563739 H0Y9J4 135 aa6.19□□□□□ -1.42
SF3B3-204ENST00000563739 SMAGPQ0VAQ4 97 aa6.19□□□□□ -1.42
SF3B3-204ENST00000563739 PRR4Q16378 134 aa6.19□□□□□ -1.42
SF3B3-204ENST00000563739 KRTAP7-1Q8IUC3 87 aa6.19□□□□□ -1.42
SF3B3-204ENST00000563739 VAMP8Q9BV40 100 aa6.19□□□□□ -1.42
SF3B3-204ENST00000563739 UBE2D4Q9Y2X8 147 aa6.19□□□□□ -1.42
SF3B3-204ENST00000563739 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.18□□□□□ -1.42
SF3B3-204ENST00000563739 K7EMI3 77 aa6.18□□□□□ -1.42
SF3B3-204ENST00000563739 IGLV7-43P04211 117 aa6.18□□□□□ -1.42
SF3B3-204ENST00000563739 DDTP30046 118 aa6.18□□□□□ -1.42
SF3B3-204ENST00000563739 RPL39P62891 51 aaKnown RBP6.18□□□□□ -1.42
SF3B3-204ENST00000563739 C9orf116Q5BN46 136 aaPredicted RBP6.18□□□□□ -1.42
SF3B3-204ENST00000563739 C1orf137Q5JT78 98 aa6.18□□□□□ -1.42
SF3B3-204ENST00000563739 Q6ZUT4 128 aa6.18□□□□□ -1.42
SF3B3-204ENST00000563739 TIMM21Q9BVV7 248 aa6.18□□□□□ -1.42
SF3B3-204ENST00000563739 CDC42SE2Q9NRR3 84 aa6.18□□□□□ -1.42
SF3B3-204ENST00000563739 CSDC2Q9Y534 153 aaKnown RBP6.18□□□□□ -1.42
SF3B3-204ENST00000563739 IGHV1-58A0A0C4DH39 117 aa6.17□□□□□ -1.42
SF3B3-204ENST00000563739 CCL25O15444 150 aa6.17□□□□□ -1.42
SF3B3-204ENST00000563739 XCL1P47992 114 aa6.17□□□□□ -1.42
SF3B3-204ENST00000563739 SYCNQ0VAF6 134 aa6.17□□□□□ -1.42
SF3B3-204ENST00000563739 ORMDL2Q53FV1 153 aa6.17□□□□□ -1.42
SF3B3-204ENST00000563739 LINC01545Q5VT33 79 aa6.17□□□□□ -1.42
SF3B3-204ENST00000563739 IFI27L1Q96BM0 104 aa6.17□□□□□ -1.42
SF3B3-204ENST00000563739 SPANXA1Q9NS26 97 aa6.17□□□□□ -1.42
SF3B3-204ENST00000563739 PAM16Q9Y3D7 125 aa6.17□□□□□ -1.42
SF3B3-204ENST00000563739 LINC00959A0A1B0GUT2 108 aa6.16□□□□□ -1.42
SF3B3-204ENST00000563739 GAGE2BQ13066 116 aa6.16□□□□□ -1.42
SF3B3-204ENST00000563739 SPATA45Q537H7 98 aa6.16□□□□□ -1.42
SF3B3-204ENST00000563739 ATOH7Q8N100 152 aa6.16□□□□□ -1.42
SF3B3-204ENST00000563739 IGLV4-69A0A075B6H9 119 aa6.15□□□□□ -1.42
SF3B3-204ENST00000563739 IGLV1-50A0A075B6I6 118 aa6.15□□□□□ -1.42
SF3B3-204ENST00000563739 LOC107984640A0A0U1RRK4 108 aa6.15□□□□□ -1.42
SF3B3-204ENST00000563739 ATP5LO75964 103 aa6.15□□□□□ -1.42
SF3B3-204ENST00000563739 MRPS36P82909 103 aaKnown RBP6.15□□□□□ -1.42
SF3B3-204ENST00000563739 RNASE13Q5GAN3 156 aaKnown RBP6.15□□□□□ -1.42
SF3B3-204ENST00000563739 FAM104AQ969W3 186 aa6.15□□□□□ -1.42
SF3B3-204ENST00000563739 MIEN1Q9BRT3 115 aa6.15□□□□□ -1.42
SF3B3-204ENST00000563739 CYSLTR1Q9Y271 337 aa6.15□□□□□ -1.42
SF3B3-204ENST00000563739 FAM168BA1KXE4 195 aa6.14□□□□□ -1.43
SF3B3-204ENST00000563739 H0Y8G0 127 aa6.14□□□□□ -1.43
SF3B3-204ENST00000563739 C2orf66Q6UXQ4 117 aa6.14□□□□□ -1.43
SF3B3-204ENST00000563739 DIRC1Q969H9 104 aa6.14□□□□□ -1.43
SF3B3-204ENST00000563739 PYGO1Q9Y3Y4 419 aa6.14□□□□□ -1.43
SF3B3-204ENST00000563739 IGLV4-3A0A075B6K6 122 aa6.13□□□□□ -1.43
SF3B3-204ENST00000563739 G0S2P27469 103 aa6.13□□□□□ -1.43
SF3B3-204ENST00000563739 SS18Q15532 418 aa6.13□□□□□ -1.43
SF3B3-204ENST00000563739 TOMM6Q96B49 74 aa6.13□□□□□ -1.43
SF3B3-204ENST00000563739 C14orf144Q96I85 54 aa6.13□□□□□ -1.43
SF3B3-204ENST00000563739 OPRPNQ99935 248 aaPredicted RBP6.13□□□□□ -1.43
SF3B3-204ENST00000563739 TRAV13-1A0A0B4J241 112 aa6.12□□□□□ -1.43
SF3B3-204ENST00000563739 LINC01549A6NIU2 74 aa6.12□□□□□ -1.43
SF3B3-204ENST00000563739 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.12□□□□□ -1.43
SF3B3-204ENST00000563739 IGLC3P0DOY3 106 aa6.12□□□□□ -1.43
SF3B3-204ENST00000563739 PMCHL2Q9BQD1 86 aa6.12□□□□□ -1.43
SF3B3-204ENST00000563739 UQCR10Q9UDW1 63 aa6.12□□□□□ -1.43
SF3B3-204ENST00000563739 PKIGQ9Y2B9 76 aa6.12□□□□□ -1.43
SF3B3-204ENST00000563739 IGIPA6NJ69 53 aa6.11□□□□□ -1.43
SF3B3-204ENST00000563739 HSBP1L1C9JCN9 74 aa6.11□□□□□ -1.43
SF3B3-204ENST00000563739 APOMO95445 188 aa6.11□□□□□ -1.43
SF3B3-204ENST00000563739 NPSP0C0P6 89 aa6.11□□□□□ -1.43
SF3B3-204ENST00000563739 CD164L2Q6UWJ8 174 aa6.11□□□□□ -1.43
SF3B3-204ENST00000563739 TMEM141Q96I45 108 aa6.11□□□□□ -1.43
SF3B3-204ENST00000563739 SCGB3A1Q96QR1 104 aa6.11□□□□□ -1.43
SF3B3-204ENST00000563739 TIMM17AQ99595 171 aa6.11□□□□□ -1.43
SF3B3-204ENST00000563739 TRAV12-1A0A0B4J245 112 aa6.1□□□□□ -1.43
SF3B3-204ENST00000563739 Q6ZN92 141 aa6.1□□□□□ -1.43
SF3B3-204ENST00000563739 ERASQ7Z444 233 aa6.1□□□□□ -1.43
SF3B3-204ENST00000563739 C2orf88Q9BSF0 95 aa6.1□□□□□ -1.43
SF3B3-204ENST00000563739 A0A087X002 238 aa6.09□□□□□ -1.43
SF3B3-204ENST00000563739 ZNF561-AS1K7EIQ3 104 aa6.09□□□□□ -1.43
SF3B3-204ENST00000563739 RPL18AQ02543 176 aaKnown RBP6.09□□□□□ -1.43
SF3B3-204ENST00000563739 AMELXQ99217 191 aa6.09□□□□□ -1.43
SF3B3-204ENST00000563739 COX7A2LO14548 114 aa6.08□□□□□ -1.44
SF3B3-204ENST00000563739 DPM2O94777 84 aa6.08□□□□□ -1.44
SF3B3-204ENST00000563739 IGKCP01834 107 aa6.08□□□□□ -1.44
SF3B3-204ENST00000563739 UBE2D1P51668 147 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms