RNA–Protein interactions for RNA: ENST00000563283.1

CNOT1-205, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-205ENST00000563283 LINC00173Q6ZV60 143 aa3.38□□□□□ -1.87
CNOT1-205ENST00000563283 ERASQ7Z444 233 aa3.38□□□□□ -1.87
CNOT1-205ENST00000563283 C6orf223Q8N319 242 aa3.38□□□□□ -1.87
CNOT1-205ENST00000563283 RMI2Q96E14 147 aa3.38□□□□□ -1.87
CNOT1-205ENST00000563283 TMEM141Q96I45 108 aa3.38□□□□□ -1.87
CNOT1-205ENST00000563283 TIMM17AQ99595 171 aa3.38□□□□□ -1.87
CNOT1-205ENST00000563283 C2orf88Q9BSF0 95 aa3.38□□□□□ -1.87
CNOT1-205ENST00000563283 VCX2Q9H322 139 aa3.38□□□□□ -1.87
CNOT1-205ENST00000563283 PRR34Q9NV39 138 aa3.38□□□□□ -1.87
CNOT1-205ENST00000563283 PYGO1Q9Y3Y4 419 aa3.38□□□□□ -1.87
CNOT1-205ENST00000563283 CSDC2Q9Y534 153 aaKnown RBP3.38□□□□□ -1.87
CNOT1-205ENST00000563283 LINC00959A0A1B0GUT2 108 aa3.37□□□□□ -1.87
CNOT1-205ENST00000563283 H0Y8G0 127 aa3.37□□□□□ -1.87
CNOT1-205ENST00000563283 PSCAO43653 123 aa3.37□□□□□ -1.87
CNOT1-205ENST00000563283 ATP5LO75964 103 aa3.37□□□□□ -1.87
CNOT1-205ENST00000563283 LEPROTL1O95214 131 aa3.37□□□□□ -1.87
CNOT1-205ENST00000563283 XCL1P47992 114 aa3.37□□□□□ -1.87
CNOT1-205ENST00000563283 SS18Q15532 418 aa3.37□□□□□ -1.87
CNOT1-205ENST00000563283 COA6Q5JTJ3 125 aaKnown RBP3.37□□□□□ -1.87
CNOT1-205ENST00000563283 NOTCH2NLQ7Z3S9 236 aa3.37□□□□□ -1.87
CNOT1-205ENST00000563283 MAPKAPK5-AS1Q8N8E1 139 aa3.37□□□□□ -1.87
CNOT1-205ENST00000563283 BAALCQ8WXS3 180 aa3.37□□□□□ -1.87
CNOT1-205ENST00000563283 CHCHD10Q8WYQ3 142 aaPredicted RBP3.37□□□□□ -1.87
CNOT1-205ENST00000563283 FAM104AQ969W3 186 aa3.37□□□□□ -1.87
CNOT1-205ENST00000563283 IFI27L1Q96BM0 104 aa3.37□□□□□ -1.87
CNOT1-205ENST00000563283 HSPB8Q9UJY1 196 aa3.37□□□□□ -1.87
CNOT1-205ENST00000563283 TRAV8-4A0A0B4J246 113 aa3.36□□□□□ -1.87
CNOT1-205ENST00000563283 CCL25O15444 150 aa3.36□□□□□ -1.87
CNOT1-205ENST00000563283 S100A2P29034 98 aa3.36□□□□□ -1.87
CNOT1-205ENST00000563283 SNRPEP62304 92 aaKnown RBP3.36□□□□□ -1.87
CNOT1-205ENST00000563283 PMVKQ15126 192 aa3.36□□□□□ -1.87
CNOT1-205ENST00000563283 AMELXQ99217 191 aa3.36□□□□□ -1.87
CNOT1-205ENST00000563283 CST9LQ9H4G1 147 aa3.36□□□□□ -1.87
CNOT1-205ENST00000563283 VPS13BQ7Z7G8 4022 aa3.35□□□□□ -1.87
CNOT1-205ENST00000563283 A0A0J9YXV3 536 aa3.35□□□□□ -1.87
CNOT1-205ENST00000563283 LRCOL1A6NCL2 159 aa3.35□□□□□ -1.87
CNOT1-205ENST00000563283 LECT2O14960 151 aa3.35□□□□□ -1.87
CNOT1-205ENST00000563283 UBE2D1P51668 147 aa3.35□□□□□ -1.87
CNOT1-205ENST00000563283 WFDC2Q14508 124 aa3.35□□□□□ -1.87
CNOT1-205ENST00000563283 LCE3CQ5T5A8 94 aa3.35□□□□□ -1.87
CNOT1-205ENST00000563283 LINC00242Q5T6M2 205 aa3.35□□□□□ -1.87
CNOT1-205ENST00000563283 CD164L2Q6UWJ8 174 aa3.35□□□□□ -1.87
CNOT1-205ENST00000563283 Q75L30 129 aa3.35□□□□□ -1.87
CNOT1-205ENST00000563283 HIST3H2BBQ8N257 126 aa3.35□□□□□ -1.87
CNOT1-205ENST00000563283 MAP1LC3CQ9BXW4 147 aa3.35□□□□□ -1.87
CNOT1-205ENST00000563283 GEMIN7Q9H840 131 aaKnown RBP3.35□□□□□ -1.87
CNOT1-205ENST00000563283 FAT1Q14517 4588 aa3.35□□□□□ -1.87
CNOT1-205ENST00000563283 SRRM2Q9UQ35 2752 aaKnown RBP3.34□□□□□ -1.87
CNOT1-205ENST00000563283 A0A087WTM6 91 aa3.34□□□□□ -1.87
CNOT1-205ENST00000563283 COX7A2LO14548 114 aa3.34□□□□□ -1.87
CNOT1-205ENST00000563283 KRTDAPP60985 99 aa3.34□□□□□ -1.87
CNOT1-205ENST00000563283 KRTAP26-1Q6PEX3 210 aa3.34□□□□□ -1.87
CNOT1-205ENST00000563283 C5orf38Q86SI9 138 aa3.34□□□□□ -1.87
CNOT1-205ENST00000563283 LINC00469Q8N7U9 141 aa3.34□□□□□ -1.87
CNOT1-205ENST00000563283 PACRGQ96M98 296 aaPredicted RBP3.34□□□□□ -1.87
CNOT1-205ENST00000563283 HIST1H2BLQ99880 126 aa3.34□□□□□ -1.87
CNOT1-205ENST00000563283 CHAC1Q9BUX1 264 aa3.34□□□□□ -1.87
CNOT1-205ENST00000563283 CHTOPQ9Y3Y2 248 aaKnown RBP3.34□□□□□ -1.87
CNOT1-205ENST00000563283 IGLV4-69A0A075B6H9 119 aa3.33□□□□□ -1.88
CNOT1-205ENST00000563283 TRAV12-1A0A0B4J245 112 aa3.33□□□□□ -1.88
CNOT1-205ENST00000563283 IGHV3OR16-9A0A0B4J2B5 98 aa3.33□□□□□ -1.88
CNOT1-205ENST00000563283 TINCRA0A1B0GVN0 87 aa3.33□□□□□ -1.88
CNOT1-205ENST00000563283 C5orf52A6NGY3 159 aa3.33□□□□□ -1.88
CNOT1-205ENST00000563283 C11orf86A6NJI1 115 aa3.33□□□□□ -1.88
CNOT1-205ENST00000563283 F8VRH5 84 aa3.33□□□□□ -1.88
CNOT1-205ENST00000563283 SYS1-DBNDD2H3BUS1 97 aa3.33□□□□□ -1.88
CNOT1-205ENST00000563283 C3orf79P0CE67 100 aa3.33□□□□□ -1.88
CNOT1-205ENST00000563283 HERVK_113P63121 156 aa3.33□□□□□ -1.88
CNOT1-205ENST00000563283 SEC11AP67812 179 aa3.33□□□□□ -1.88
CNOT1-205ENST00000563283 COX6A2Q02221 97 aa3.33□□□□□ -1.88
CNOT1-205ENST00000563283 HIGD2BQ4VC39 106 aa3.33□□□□□ -1.88
CNOT1-205ENST00000563283 SPATA12Q7Z6I5 190 aa3.33□□□□□ -1.88
CNOT1-205ENST00000563283 PMCHL2Q9BQD1 86 aa3.33□□□□□ -1.88
CNOT1-205ENST00000563283 MRPL35Q9NZE8 188 aaKnown RBP3.33□□□□□ -1.88
CNOT1-205ENST00000563283 CDKN2A-AS1Q9UH64 79 aa3.33□□□□□ -1.88
CNOT1-205ENST00000563283 A0A087WZ39 114 aa3.32□□□□□ -1.88
CNOT1-205ENST00000563283 IGHV1-58A0A0C4DH39 117 aa3.32□□□□□ -1.88
CNOT1-205ENST00000563283 C20orf202A1L168 122 aa3.32□□□□□ -1.88
CNOT1-205ENST00000563283 H3BRM9 83 aa3.32□□□□□ -1.88
CNOT1-205ENST00000563283 DPM2O94777 84 aa3.32□□□□□ -1.88
CNOT1-205ENST00000563283 APOMO95445 188 aa3.32□□□□□ -1.88
CNOT1-205ENST00000563283 SPINK8P0C7L1 97 aa3.32□□□□□ -1.88
CNOT1-205ENST00000563283 IGLC3P0DOY3 106 aa3.32□□□□□ -1.88
CNOT1-205ENST00000563283 PLNP26678 52 aa3.32□□□□□ -1.88
CNOT1-205ENST00000563283 TMEM170BQ5T4T1 132 aa3.32□□□□□ -1.88
CNOT1-205ENST00000563283 CFAP161Q6P656 301 aa3.32□□□□□ -1.88
CNOT1-205ENST00000563283 PET117Q6UWS5 81 aa3.32□□□□□ -1.88
CNOT1-205ENST00000563283 C15orf56Q8N910 161 aa3.32□□□□□ -1.88
CNOT1-205ENST00000563283 OR10D4PQ8NGN7 298 aa3.32□□□□□ -1.88
CNOT1-205ENST00000563283 ORAOV1Q8WV07 137 aa3.32□□□□□ -1.88
CNOT1-205ENST00000563283 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.31□□□□□ -1.88
CNOT1-205ENST00000563283 IGHV3-64A0A075B6Q5 118 aa3.31□□□□□ -1.88
CNOT1-205ENST00000563283 ZNF22P17026 224 aaPredicted RBP3.31□□□□□ -1.88
CNOT1-205ENST00000563283 KRTAP10-1P60331 282 aa3.31□□□□□ -1.88
CNOT1-205ENST00000563283 SPAG11BQ08648 103 aa3.31□□□□□ -1.88
CNOT1-205ENST00000563283 LINC01545Q5VT33 79 aa3.31□□□□□ -1.88
CNOT1-205ENST00000563283 FAM19A3Q7Z5A8 133 aa3.31□□□□□ -1.88
CNOT1-205ENST00000563283 LINC00526Q96FQ7 95 aa3.31□□□□□ -1.88
CNOT1-205ENST00000563283 TOMM7Q9P0U1 55 aa3.31□□□□□ -1.88
CNOT1-205ENST00000563283 GVQW2A0A096LPI5 108 aaPredicted RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms