RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 C10orf25Q5T742 122 aa10.49□□□□□ -0.73
USB1-206ENST00000562534 C2orf82Q6UX34 121 aa10.49□□□□□ -0.73
USB1-206ENST00000562534 LINC00474Q9P2X8 69 aa10.49□□□□□ -0.73
USB1-206ENST00000562534 PET117Q6UWS5 81 aa10.48□□□□□ -0.73
USB1-206ENST00000562534 DYNC1H1Q14204 4646 aaKnown RBP10.48□□□□□ -0.73
USB1-206ENST00000562534 TMEM223A0PJW6 202 aa10.47□□□□□ -0.73
USB1-206ENST00000562534 DPM2O94777 84 aa10.47□□□□□ -0.73
USB1-206ENST00000562534 C6orf48Q9UBA6 75 aa10.47□□□□□ -0.73
USB1-206ENST00000562534 DNAH5Q8TE73 4624 aa10.46□□□□□ -0.73
USB1-206ENST00000562534 IGKCP01834 107 aa10.46□□□□□ -0.73
USB1-206ENST00000562534 S100A2P29034 98 aa10.46□□□□□ -0.73
USB1-206ENST00000562534 CIRBPQ14011 172 aaKnown RBP10.46□□□□□ -0.73
USB1-206ENST00000562534 TLX1NBP0CAT3 122 aa10.45□□□□□ -0.74
USB1-206ENST00000562534 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.45□□□□□ -0.74
USB1-206ENST00000562534 C3orf79P0CE67 100 aa10.44□□□□□ -0.74
USB1-206ENST00000562534 GAGE2BQ13066 116 aa10.44□□□□□ -0.74
USB1-206ENST00000562534 SFTA2Q6UW10 78 aa10.44□□□□□ -0.74
USB1-206ENST00000562534 HIST3H2BBQ8N257 126 aa10.44□□□□□ -0.74
USB1-206ENST00000562534 PMCHL2Q9BQD1 86 aa10.44□□□□□ -0.74
USB1-206ENST00000562534 LRP1BQ9NZR2 4599 aa10.43□□□□□ -0.74
USB1-206ENST00000562534 A0A096LNI7 61 aa10.43□□□□□ -0.74
USB1-206ENST00000562534 IGKV2-24A0A0C4DH68 120 aa10.43□□□□□ -0.74
USB1-206ENST00000562534 PTTG1IPP53801 180 aa10.43□□□□□ -0.74
USB1-206ENST00000562534 KRTDAPP60985 99 aa10.43□□□□□ -0.74
USB1-206ENST00000562534 MAJINQ3KP22 176 aa10.43□□□□□ -0.74
USB1-206ENST00000562534 LINC01545Q5VT33 79 aa10.43□□□□□ -0.74
USB1-206ENST00000562534 SCXQ7RTU7 201 aa10.43□□□□□ -0.74
USB1-206ENST00000562534 CIRBP-AS1Q8TBR5 109 aa10.43□□□□□ -0.74
USB1-206ENST00000562534 SPACA4Q8TDM5 124 aa10.43□□□□□ -0.74
USB1-206ENST00000562534 PANO1I0J062 215 aa10.42□□□□□ -0.74
USB1-206ENST00000562534 CHTF8P0CG12 524 aa10.42□□□□□ -0.74
USB1-206ENST00000562534 HERVK_113P61574 105 aa10.42□□□□□ -0.74
USB1-206ENST00000562534 SNRPEP62304 92 aaKnown RBP10.42□□□□□ -0.74
USB1-206ENST00000562534 RPL18AQ02543 176 aaKnown RBP10.42□□□□□ -0.74
USB1-206ENST00000562534 NDUFC2-KCTD14E9PQ53 114 aa10.41□□□□□ -0.74
USB1-206ENST00000562534 C9orf116Q5BN46 136 aaPredicted RBP10.41□□□□□ -0.74
USB1-206ENST00000562534 A0A087WYN8 130 aa10.4□□□□□ -0.74
USB1-206ENST00000562534 C20orf202A1L168 122 aa10.4□□□□□ -0.74
USB1-206ENST00000562534 C5orf52A6NGY3 159 aa10.4□□□□□ -0.74
USB1-206ENST00000562534 AKR1D1P51857 326 aa10.4□□□□□ -0.74
USB1-206ENST00000562534 Q6ZRP5 223 aa10.4□□□□□ -0.74
USB1-206ENST00000562534 HIST1H2BLQ99880 126 aa10.4□□□□□ -0.74
USB1-206ENST00000562534 HAMPP81172 84 aa10.39□□□□□ -0.75
USB1-206ENST00000562534 STPG4Q8N801 248 aa10.39□□□□□ -0.75
USB1-206ENST00000562534 PLAC8Q9NZF1 115 aa10.39□□□□□ -0.75
USB1-206ENST00000562534 LEPROTO15243 131 aa10.38□□□□□ -0.75
USB1-206ENST00000562534 GAGE2EQ4V326 116 aa10.38□□□□□ -0.75
USB1-206ENST00000562534 PLEKHB2Q96CS7 222 aa10.38□□□□□ -0.75
USB1-206ENST00000562534 GAGE2DQ9UEU5 116 aa10.38□□□□□ -0.75
USB1-206ENST00000562534 SMR3BP02814 79 aaPredicted RBP10.37□□□□□ -0.75
USB1-206ENST00000562534 COX17Q14061 63 aa10.37□□□□□ -0.75
USB1-206ENST00000562534 Q8N1X5 172 aa10.37□□□□□ -0.75
USB1-206ENST00000562534 KIAA1109Q2LD37 5005 aa10.37□□□□□ -0.75
USB1-206ENST00000562534 FAM229AH3BQW9 127 aa10.36□□□□□ -0.75
USB1-206ENST00000562534 ZNF625Q96I27 306 aaPredicted RBP10.36□□□□□ -0.75
USB1-206ENST00000562534 MYMXA0A1B0GTQ4 84 aa10.35□□□□□ -0.75
USB1-206ENST00000562534 LINC00587B1AMM8 73 aa10.35□□□□□ -0.75
USB1-206ENST00000562534 HERV-K104P63124 156 aa10.35□□□□□ -0.75
USB1-206ENST00000562534 EPM2AB3EWF7 344 aa10.34□□□□□ -0.75
USB1-206ENST00000562534 E9PLD3 99 aa10.34□□□□□ -0.75
USB1-206ENST00000562534 J3QQQ9 107 aa10.34□□□□□ -0.75
USB1-206ENST00000562534 NDUFA12Q9UI09 145 aa10.34□□□□□ -0.75
USB1-206ENST00000562534 ERG28Q9UKR5 140 aa10.34□□□□□ -0.75
USB1-206ENST00000562534 LGALS3P17931 250 aaKnown RBP10.33□□□□□ -0.76
USB1-206ENST00000562534 PFN2P35080 140 aa10.33□□□□□ -0.76
USB1-206ENST00000562534 NMUP48645 174 aa10.33□□□□□ -0.76
USB1-206ENST00000562534 DNAH8Q96JB1 4490 aa10.32□□□□□ -0.76
USB1-206ENST00000562534 A0A1W2PNN7 141 aa10.32□□□□□ -0.76
USB1-206ENST00000562534 LINC00528Q8N1L1 170 aa10.31□□□□□ -0.76
USB1-206ENST00000562534 RYR1P21817 5038 aa10.31□□□□□ -0.76
USB1-206ENST00000562534 APOBP04114 4563 aaKnown RBP10.3□□□□□ -0.76
USB1-206ENST00000562534 LINC00158P58513 81 aa10.3□□□□□ -0.76
USB1-206ENST00000562534 C9orf129Q5T035 196 aaKnown RBP10.3□□□□□ -0.76
USB1-206ENST00000562534 PLA2G1BP04054 148 aaKnown RBP10.29□□□□□ -0.76
USB1-206ENST00000562534 TSPEAR-AS2P59090 65 aa10.29□□□□□ -0.76
USB1-206ENST00000562534 C7orf33Q8WU49 177 aa10.29□□□□□ -0.76
USB1-206ENST00000562534 XAGE1AQ9HD64 81 aa10.29□□□□□ -0.76
USB1-206ENST00000562534 MEIG1Q5JSS6 88 aa10.28□□□□□ -0.76
USB1-206ENST00000562534 Q5VSD8 79 aa10.27□□□□□ -0.77
USB1-206ENST00000562534 KRTAP17-1Q9BYP8 105 aa10.27□□□□□ -0.77
USB1-206ENST00000562534 FAM168BA1KXE4 195 aa10.26□□□□□ -0.77
USB1-206ENST00000562534 SCGB1D1O95968 90 aa10.26□□□□□ -0.77
USB1-206ENST00000562534 ATOH7Q8N100 152 aa10.26□□□□□ -0.77
USB1-206ENST00000562534 SND1-IT1Q9HBX3 110 aa10.26□□□□□ -0.77
USB1-206ENST00000562534 PLA2G2DQ9UNK4 145 aa10.26□□□□□ -0.77
USB1-206ENST00000562534 SMIM13P0DJ93 91 aa10.25□□□□□ -0.77
USB1-206ENST00000562534 FAM19A5Q7Z5A7 132 aaPredicted RBP10.25□□□□□ -0.77
USB1-206ENST00000562534 HSPG2P98160 4391 aa10.25□□□□□ -0.77
USB1-206ENST00000562534 A0A0U1RRA0 63 aa10.24□□□□□ -0.77
USB1-206ENST00000562534 TMA7Q9Y2S6 64 aaKnown RBP10.24□□□□□ -0.77
USB1-206ENST00000562534 IGKV2D-26A0A0A0MRZ7 120 aa10.23□□□□□ -0.77
USB1-206ENST00000562534 HSBP1L1C9JCN9 74 aa10.23□□□□□ -0.77
USB1-206ENST00000562534 RPL37AP61513 92 aaKnown RBP10.23□□□□□ -0.77
USB1-206ENST00000562534 LBHQ53QV2 105 aaPredicted RBP10.23□□□□□ -0.77
USB1-206ENST00000562534 KRTAP7-1Q8IUC3 87 aa10.23□□□□□ -0.77
USB1-206ENST00000562534 RPL24P83731 157 aaKnown RBP10.22□□□□□ -0.77
USB1-206ENST00000562534 SERTAD4-AS1Q5TG53 156 aa10.22□□□□□ -0.77
USB1-206ENST00000562534 PHF5AQ7RTV0 110 aaKnown RBP10.22□□□□□ -0.77
USB1-206ENST00000562534 C22orf24Q9Y442 160 aa10.22□□□□□ -0.77
USB1-206ENST00000562534 A0A0J9YXY3 114 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms