RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 MT1HL1P0DM35 61 aa5.17□□□□□ -1.58
GINS3-204ENST00000561952 PRR3P79522 188 aaKnown RBP5.17□□□□□ -1.58
GINS3-204ENST00000561952 RPL18AQ02543 176 aaKnown RBP5.17□□□□□ -1.58
GINS3-204ENST00000561952 SMAGPQ0VAQ4 97 aa5.17□□□□□ -1.58
GINS3-204ENST00000561952 ORMDL3Q8N138 153 aa5.17□□□□□ -1.58
GINS3-204ENST00000561952 CAMK2N2Q96S95 79 aa5.17□□□□□ -1.58
GINS3-204ENST00000561952 OPRPNQ99935 248 aaPredicted RBP5.17□□□□□ -1.58
GINS3-204ENST00000561952 A0A0J9YXV3 536 aa5.16□□□□□ -1.58
GINS3-204ENST00000561952 LINC01546A6NGU7 62 aa5.16□□□□□ -1.58
GINS3-204ENST00000561952 PRSS47A8MTI9 375 aa5.16□□□□□ -1.58
GINS3-204ENST00000561952 HSBP1O75506 76 aa5.16□□□□□ -1.58
GINS3-204ENST00000561952 LINC00614P0C842 121 aa5.16□□□□□ -1.58
GINS3-204ENST00000561952 SPAG11BQ08648 103 aa5.16□□□□□ -1.58
GINS3-204ENST00000561952 ODF1Q14990 250 aa5.16□□□□□ -1.58
GINS3-204ENST00000561952 PRELID3AQ96N28 172 aa5.16□□□□□ -1.58
GINS3-204ENST00000561952 SMIM2Q9BVW6 85 aa5.16□□□□□ -1.58
GINS3-204ENST00000561952 UBR4Q5T4S7 5183 aa5.16□□□□□ -1.58
GINS3-204ENST00000561952 LOC107984640A0A0U1RRK4 108 aa5.15□□□□□ -1.59
GINS3-204ENST00000561952 PTTG1IPP53801 180 aa5.15□□□□□ -1.59
GINS3-204ENST00000561952 ORAOV1Q8WV07 137 aa5.15□□□□□ -1.59
GINS3-204ENST00000561952 C20orf78Q9BR46 151 aa5.15□□□□□ -1.59
GINS3-204ENST00000561952 LINC00474Q9P2X8 69 aa5.15□□□□□ -1.59
GINS3-204ENST00000561952 PKIGQ9Y2B9 76 aa5.15□□□□□ -1.59
GINS3-204ENST00000561952 LOC389332A0A1B0GUA5 103 aa5.14□□□□□ -1.59
GINS3-204ENST00000561952 APOMO95445 188 aa5.14□□□□□ -1.59
GINS3-204ENST00000561952 TEX43Q6ZNM6 134 aa5.14□□□□□ -1.59
GINS3-204ENST00000561952 FAM19A2Q8N3H0 131 aa5.14□□□□□ -1.59
GINS3-204ENST00000561952 CSDC2Q9Y534 153 aaKnown RBP5.14□□□□□ -1.59
GINS3-204ENST00000561952 A0A1W2PNN7 141 aa5.13□□□□□ -1.59
GINS3-204ENST00000561952 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.13□□□□□ -1.59
GINS3-204ENST00000561952 SCGB1D1O95968 90 aa5.13□□□□□ -1.59
GINS3-204ENST00000561952 C3orf79P0CE67 100 aa5.13□□□□□ -1.59
GINS3-204ENST00000561952 TIMM21Q9BVV7 248 aa5.13□□□□□ -1.59
GINS3-204ENST00000561952 IFI27P40305 119 aaPredicted RBP5.12□□□□□ -1.59
GINS3-204ENST00000561952 RPL32P62910 135 aaKnown RBP5.12□□□□□ -1.59
GINS3-204ENST00000561952 C9orf116Q5BN46 136 aaPredicted RBP5.12□□□□□ -1.59
GINS3-204ENST00000561952 Q6ZRP5 223 aa5.12□□□□□ -1.59
GINS3-204ENST00000561952 FA2HQ7L5A8 372 aa5.12□□□□□ -1.59
GINS3-204ENST00000561952 PHF5AQ7RTV0 110 aaKnown RBP5.12□□□□□ -1.59
GINS3-204ENST00000561952 FAM104AQ969W3 186 aa5.12□□□□□ -1.59
GINS3-204ENST00000561952 MAP1LC3AQ9H492 121 aa5.12□□□□□ -1.59
GINS3-204ENST00000561952 NXT2Q9NPJ8 142 aaKnown RBP5.12□□□□□ -1.59
GINS3-204ENST00000561952 SPANXA1Q9NS26 97 aa5.12□□□□□ -1.59
GINS3-204ENST00000561952 A0A096LNJ9 63 aa5.11□□□□□ -1.59
GINS3-204ENST00000561952 PCP4L1A6NKN8 68 aa5.11□□□□□ -1.59
GINS3-204ENST00000561952 TSTD3H0UI37 97 aa5.11□□□□□ -1.59
GINS3-204ENST00000561952 K7EMI3 77 aa5.11□□□□□ -1.59
GINS3-204ENST00000561952 LEPROTL1O95214 131 aa5.11□□□□□ -1.59
GINS3-204ENST00000561952 KRTDAPP60985 99 aa5.11□□□□□ -1.59
GINS3-204ENST00000561952 PMCHL1Q16048 86 aa5.11□□□□□ -1.59
GINS3-204ENST00000561952 C10orf25Q5T742 122 aa5.11□□□□□ -1.59
GINS3-204ENST00000561952 ZC2HC1BQ5TFG8 222 aa5.11□□□□□ -1.59
GINS3-204ENST00000561952 Q8N8P6 123 aa5.11□□□□□ -1.59
GINS3-204ENST00000561952 C2orf48Q96LS8 159 aa5.11□□□□□ -1.59
GINS3-204ENST00000561952 KRTAP9-8Q9BYQ0 159 aa5.11□□□□□ -1.59
GINS3-204ENST00000561952 HSPB8Q9UJY1 196 aa5.11□□□□□ -1.59
GINS3-204ENST00000561952 IGLV4-3A0A075B6K6 122 aa5.1□□□□□ -1.59
GINS3-204ENST00000561952 IGHV3OR16-9A0A0B4J2B5 98 aa5.1□□□□□ -1.59
GINS3-204ENST00000561952 FAM168BA1KXE4 195 aa5.1□□□□□ -1.59
GINS3-204ENST00000561952 SYS1-DBNDD2H3BUS1 97 aa5.1□□□□□ -1.59
GINS3-204ENST00000561952 NDUFA1O15239 70 aa5.1□□□□□ -1.59
GINS3-204ENST00000561952 MRPS36P82909 103 aaKnown RBP5.1□□□□□ -1.59
GINS3-204ENST00000561952 GAGE2EQ4V326 116 aa5.1□□□□□ -1.59
GINS3-204ENST00000561952 REG3GQ6UW15 175 aa5.1□□□□□ -1.59
GINS3-204ENST00000561952 PET117Q6UWS5 81 aa5.1□□□□□ -1.59
GINS3-204ENST00000561952 UNQ6190/PRO20217Q6UXQ8 127 aa5.1□□□□□ -1.59
GINS3-204ENST00000561952 FAM19A5Q7Z5A7 132 aaPredicted RBP5.1□□□□□ -1.59
GINS3-204ENST00000561952 LINC01600Q96MT4 127 aa5.1□□□□□ -1.59
GINS3-204ENST00000561952 GAGE2DQ9UEU5 116 aa5.1□□□□□ -1.59
GINS3-204ENST00000561952 PSORS1C2Q9UIG4 136 aa5.1□□□□□ -1.59
GINS3-204ENST00000561952 LINC00587B1AMM8 73 aa5.09□□□□□ -1.59
GINS3-204ENST00000561952 HBDP02042 147 aa5.09□□□□□ -1.59
GINS3-204ENST00000561952 C1orf137Q5JT78 98 aa5.09□□□□□ -1.59
GINS3-204ENST00000561952 SPINK6Q6UWN8 80 aa5.09□□□□□ -1.59
GINS3-204ENST00000561952 LINC00173Q6ZV60 143 aa5.09□□□□□ -1.59
GINS3-204ENST00000561952 TMEM141Q96I45 108 aa5.09□□□□□ -1.59
GINS3-204ENST00000561952 MAP1LC3CQ9BXW4 147 aa5.09□□□□□ -1.59
GINS3-204ENST00000561952 C6orf48Q9UBA6 75 aa5.09□□□□□ -1.59
GINS3-204ENST00000561952 LRP2P98164 4655 aa5.09□□□□□ -1.6
GINS3-204ENST00000561952 C20orf202A1L168 122 aa5.08□□□□□ -1.6
GINS3-204ENST00000561952 LINC00242Q5T6M2 205 aa5.08□□□□□ -1.6
GINS3-204ENST00000561952 LINC01545Q5VT33 79 aa5.08□□□□□ -1.6
GINS3-204ENST00000561952 C2orf82Q6UX34 121 aa5.08□□□□□ -1.6
GINS3-204ENST00000561952 C2orf88Q9BSF0 95 aa5.08□□□□□ -1.6
GINS3-204ENST00000561952 VAMP8Q9BV40 100 aa5.08□□□□□ -1.6
GINS3-204ENST00000561952 MRPL35Q9NZE8 188 aaKnown RBP5.08□□□□□ -1.6
GINS3-204ENST00000561952 TOMM7Q9P0U1 55 aa5.08□□□□□ -1.6
GINS3-204ENST00000561952 DDTP30046 118 aa5.07□□□□□ -1.6
GINS3-204ENST00000561952 C2orf66Q6UXQ4 117 aa5.07□□□□□ -1.6
GINS3-204ENST00000561952 Q6ZN92 141 aa5.07□□□□□ -1.6
GINS3-204ENST00000561952 PRO1933Q9H354 126 aa5.07□□□□□ -1.6
GINS3-204ENST00000561952 CYSLTR1Q9Y271 337 aa5.07□□□□□ -1.6
GINS3-204ENST00000561952 A0A087WZ39 114 aa5.06□□□□□ -1.6
GINS3-204ENST00000561952 LINC01549A6NIU2 74 aa5.06□□□□□ -1.6
GINS3-204ENST00000561952 UBE2D1P51668 147 aa5.06□□□□□ -1.6
GINS3-204ENST00000561952 SRSF9Q13242 221 aaKnown RBP eCLIP5.06□□□□□ -1.6
GINS3-204ENST00000561952 RNF151Q2KHN1 245 aa5.06□□□□□ -1.6
GINS3-204ENST00000561952 IFI27L1Q96BM0 104 aa5.06□□□□□ -1.6
GINS3-204ENST00000561952 PYGO1Q9Y3Y4 419 aa5.06□□□□□ -1.6
GINS3-204ENST00000561952 M0QXV9 152 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms