RNA–Protein interactions for RNA: ENST00000560595.5

ETFA-215, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 1 (best)

Gene ETFA, Length 917 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-215ENST00000560595 ATP6V1G1O75348 118 aa12.96□□□□□ -0.33
ETFA-215ENST00000560595 PTTG1IPP53801 180 aa12.96□□□□□ -0.33
ETFA-215ENST00000560595 PLAC8Q9NZF1 115 aa12.96□□□□□ -0.33
ETFA-215ENST00000560595 SPINK8P0C7L1 97 aa12.95□□□□□ -0.34
ETFA-215ENST00000560595 S100A1P23297 94 aa12.95□□□□□ -0.34
ETFA-215ENST00000560595 GAGE2BQ13066 116 aa12.95□□□□□ -0.34
ETFA-215ENST00000560595 LINC00474Q9P2X8 69 aa12.95□□□□□ -0.34
ETFA-215ENST00000560595 HIST1H2BKO60814 126 aa12.94□□□□□ -0.34
ETFA-215ENST00000560595 HIST1H2BJP06899 126 aa12.94□□□□□ -0.34
ETFA-215ENST00000560595 ZNF22P17026 224 aaPredicted RBP12.94□□□□□ -0.34
ETFA-215ENST00000560595 HIST1H2BOP23527 126 aa12.94□□□□□ -0.34
ETFA-215ENST00000560595 HIST1H2BBP33778 126 aa12.94□□□□□ -0.34
ETFA-215ENST00000560595 HIST1H2BDP58876 126 aa12.94□□□□□ -0.34
ETFA-215ENST00000560595 HIST1H2BCP62807 126 aa12.94□□□□□ -0.34
ETFA-215ENST00000560595 RPL18AQ02543 176 aaKnown RBP12.94□□□□□ -0.34
ETFA-215ENST00000560595 HIST2H2BEQ16778 126 aa12.94□□□□□ -0.34
ETFA-215ENST00000560595 C6orf226Q5I0X4 101 aa12.94□□□□□ -0.34
ETFA-215ENST00000560595 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.94□□□□□ -0.34
ETFA-215ENST00000560595 STPG4Q8N801 248 aa12.94□□□□□ -0.34
ETFA-215ENST00000560595 HIST1H2BHQ93079 126 aa12.94□□□□□ -0.34
ETFA-215ENST00000560595 HIST1H2BNQ99877 126 aa12.94□□□□□ -0.34
ETFA-215ENST00000560595 HIST1H2BMQ99879 126 aa12.94□□□□□ -0.34
ETFA-215ENST00000560595 TRAV12-1A0A0B4J245 112 aa12.93□□□□□ -0.34
ETFA-215ENST00000560595 TRBV30A0A0K0K1B3 111 aa12.93□□□□□ -0.34
ETFA-215ENST00000560595 C11orf86A6NJI1 115 aa12.93□□□□□ -0.34
ETFA-215ENST00000560595 H3BRM9 83 aa12.93□□□□□ -0.34
ETFA-215ENST00000560595 CKS1BP61024 79 aa12.93□□□□□ -0.34
ETFA-215ENST00000560595 CHTOPQ9Y3Y2 248 aaKnown RBP12.93□□□□□ -0.34
ETFA-215ENST00000560595 LEPROTL1O95214 131 aa12.92□□□□□ -0.34
ETFA-215ENST00000560595 TLX1NBP0CAT3 122 aa12.91□□□□□ -0.34
ETFA-215ENST00000560595 COX7B2Q8TF08 81 aa12.91□□□□□ -0.34
ETFA-215ENST00000560595 PLA2G1BP04054 148 aaKnown RBP12.9□□□□□ -0.34
ETFA-215ENST00000560595 C9orf116Q5BN46 136 aaPredicted RBP12.9□□□□□ -0.34
ETFA-215ENST00000560595 Q6ZRP5 223 aa12.9□□□□□ -0.34
ETFA-215ENST00000560595 PKHD1L1Q86WI1 4243 aa12.89□□□□□ -0.35
ETFA-215ENST00000560595 IGLV5-39A0A0G2JS06 123 aa12.88□□□□□ -0.35
ETFA-215ENST00000560595 F8VRH5 84 aa12.88□□□□□ -0.35
ETFA-215ENST00000560595 FABP4P15090 132 aa12.88□□□□□ -0.35
ETFA-215ENST00000560595 CXCL5P42830 114 aa12.88□□□□□ -0.35
ETFA-215ENST00000560595 KRTAP10-4P60372 401 aaPredicted RBP12.88□□□□□ -0.35
ETFA-215ENST00000560595 H0Y8G0 127 aa12.87□□□□□ -0.35
ETFA-215ENST00000560595 TMEM170BQ5T4T1 132 aa12.87□□□□□ -0.35
ETFA-215ENST00000560595 HSPB8Q9UJY1 196 aa12.87□□□□□ -0.35
ETFA-215ENST00000560595 A0A1W2PNN7 141 aa12.86□□□□□ -0.35
ETFA-215ENST00000560595 NDUFC2-KCTD14E9PQ53 114 aa12.86□□□□□ -0.35
ETFA-215ENST00000560595 INAFM2P0DMQ5 153 aa12.85□□□□□ -0.35
ETFA-215ENST00000560595 RPL37AP61513 92 aaKnown RBP12.85□□□□□ -0.35
ETFA-215ENST00000560595 ODF1Q14990 250 aa12.85□□□□□ -0.35
ETFA-215ENST00000560595 GAGE2EQ4V326 116 aa12.85□□□□□ -0.35
ETFA-215ENST00000560595 GAGE2DQ9UEU5 116 aa12.85□□□□□ -0.35
ETFA-215ENST00000560595 FLG2Q5D862 2391 aaPredicted RBP12.84□□□□□ -0.35
ETFA-215ENST00000560595 MYCBP2O75592 4640 aa12.83□□□□□ -0.36
ETFA-215ENST00000560595 C7orf33Q8WU49 177 aa12.82□□□□□ -0.36
ETFA-215ENST00000560595 TMEM223A0PJW6 202 aa12.81□□□□□ -0.36
ETFA-215ENST00000560595 FAM168BA1KXE4 195 aa12.8□□□□□ -0.36
ETFA-215ENST00000560595 COA6Q5JTJ3 125 aaKnown RBP12.8□□□□□ -0.36
ETFA-215ENST00000560595 C9orf129Q5T035 196 aaKnown RBP12.79□□□□□ -0.36
ETFA-215ENST00000560595 PMCHL2Q9BQD1 86 aa12.78□□□□□ -0.36
ETFA-215ENST00000560595 MAP1LC3CQ9BXW4 147 aa12.78□□□□□ -0.36
ETFA-215ENST00000560595 FAM19A5Q7Z5A7 132 aaPredicted RBP12.77□□□□□ -0.37
ETFA-215ENST00000560595 KRTAP7-1Q8IUC3 87 aa12.76□□□□□ -0.37
ETFA-215ENST00000560595 DPM2O94777 84 aa12.75□□□□□ -0.37
ETFA-215ENST00000560595 PLNP26678 52 aa12.75□□□□□ -0.37
ETFA-215ENST00000560595 PHF5AQ7RTV0 110 aaKnown RBP12.75□□□□□ -0.37
ETFA-215ENST00000560595 XAGE1AQ9HD64 81 aa12.75□□□□□ -0.37
ETFA-215ENST00000560595 HNRNPA3P51991 378 aaKnown RBP12.74□□□□□ -0.37
ETFA-215ENST00000560595 ZNF625Q96I27 306 aaPredicted RBP12.74□□□□□ -0.37
ETFA-215ENST00000560595 PRR3P79522 188 aaKnown RBP12.73□□□□□ -0.37
ETFA-215ENST00000560595 FAT3Q8TDW7 4589 aa12.72□□□□□ -0.37
ETFA-215ENST00000560595 SYS1-DBNDD2H3BUS1 97 aa12.72□□□□□ -0.37
ETFA-215ENST00000560595 IGKCP01834 107 aa12.72□□□□□ -0.37
ETFA-215ENST00000560595 PFN2P35080 140 aa12.71□□□□□ -0.37
ETFA-215ENST00000560595 SERTAD4-AS1Q5TG53 156 aa12.71□□□□□ -0.37
ETFA-215ENST00000560595 SFTA2Q6UW10 78 aa12.71□□□□□ -0.37
ETFA-215ENST00000560595 ERG28Q9UKR5 140 aa12.71□□□□□ -0.37
ETFA-215ENST00000560595 LRP1Q07954 4544 aaKnown RBP12.7□□□□□ -0.38
ETFA-215ENST00000560595 M0QXV9 152 aa12.7□□□□□ -0.38
ETFA-215ENST00000560595 C3orf79P0CE67 100 aa12.67□□□□□ -0.38
ETFA-215ENST00000560595 TSPEAR-AS2P59090 65 aa12.67□□□□□ -0.38
ETFA-215ENST00000560595 LEPROTO15243 131 aa12.66□□□□□ -0.38
ETFA-215ENST00000560595 HERVK_113P61574 105 aa12.66□□□□□ -0.38
ETFA-215ENST00000560595 COX17Q14061 63 aa12.66□□□□□ -0.38
ETFA-215ENST00000560595 LINC01545Q5VT33 79 aa12.66□□□□□ -0.38
ETFA-215ENST00000560595 PET117Q6UWS5 81 aa12.66□□□□□ -0.38
ETFA-215ENST00000560595 KRTAP11-1Q8IUC1 163 aa12.66□□□□□ -0.38
ETFA-215ENST00000560595 PSORS1C2Q9UIG4 136 aa12.66□□□□□ -0.38
ETFA-215ENST00000560595 PLEKHB2Q96CS7 222 aa12.65□□□□□ -0.38
ETFA-215ENST00000560595 NDUFA12Q9UI09 145 aa12.65□□□□□ -0.38
ETFA-215ENST00000560595 KRTDAPP60985 99 aa12.64□□□□□ -0.39
ETFA-215ENST00000560595 SND1-IT1Q9HBX3 110 aa12.64□□□□□ -0.39
ETFA-215ENST00000560595 C22orf24Q9Y442 160 aa12.64□□□□□ -0.39
ETFA-215ENST00000560595 PLA2G2DQ9UNK4 145 aa12.63□□□□□ -0.39
ETFA-215ENST00000560595 J3QQQ9 107 aa12.62□□□□□ -0.39
ETFA-215ENST00000560595 UBE2BP63146 152 aa12.62□□□□□ -0.39
ETFA-215ENST00000560595 DMBT1Q9UGM3 2413 aaPredicted RBP12.62□□□□□ -0.39
ETFA-215ENST00000560595 A0A0U1RRA0 63 aa12.61□□□□□ -0.39
ETFA-215ENST00000560595 MYMXA0A1B0GTQ4 84 aa12.61□□□□□ -0.39
ETFA-215ENST00000560595 LINC00158P58513 81 aa12.61□□□□□ -0.39
ETFA-215ENST00000560595 HERV-K104P63124 156 aa12.61□□□□□ -0.39
ETFA-215ENST00000560595 SMIM13P0DJ93 91 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms