RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 SPINK8P0C7L1 97 aa5.64□□□□□ -1.51
LRRC28-215ENST00000559774 GCSHP23434 173 aa5.64□□□□□ -1.51
LRRC28-215ENST00000559774 CARD19Q96LW7 228 aa5.64□□□□□ -1.51
LRRC28-215ENST00000559774 CAMK2N2Q96S95 79 aa5.64□□□□□ -1.51
LRRC28-215ENST00000559774 PLEKHB2Q96CS7 222 aa5.63□□□□□ -1.51
LRRC28-215ENST00000559774 TOMM7Q9P0U1 55 aa5.63□□□□□ -1.51
LRRC28-215ENST00000559774 HECTD4Q9Y4D8 3996 aa5.63□□□□□ -1.51
LRRC28-215ENST00000559774 C16orf90A8MZG2 172 aa5.62□□□□□ -1.51
LRRC28-215ENST00000559774 E9PLD3 99 aa5.62□□□□□ -1.51
LRRC28-215ENST00000559774 LEPROTO15243 131 aa5.62□□□□□ -1.51
LRRC28-215ENST00000559774 NMUP48645 174 aa5.62□□□□□ -1.51
LRRC28-215ENST00000559774 Q6ZRU5 148 aa5.62□□□□□ -1.51
LRRC28-215ENST00000559774 PMCHL2Q9BQD1 86 aa5.62□□□□□ -1.51
LRRC28-215ENST00000559774 TMA7Q9Y2S6 64 aaKnown RBP5.62□□□□□ -1.51
LRRC28-215ENST00000559774 LINC00587B1AMM8 73 aa5.61□□□□□ -1.51
LRRC28-215ENST00000559774 TLX1NBP0CAT3 122 aa5.61□□□□□ -1.51
LRRC28-215ENST00000559774 HERV-K104P63124 156 aa5.61□□□□□ -1.51
LRRC28-215ENST00000559774 LCE2CQ5TA81 110 aa5.61□□□□□ -1.51
LRRC28-215ENST00000559774 SDIM1Q6ZPB5 146 aa5.61□□□□□ -1.51
LRRC28-215ENST00000559774 LINC00474Q9P2X8 69 aa5.61□□□□□ -1.51
LRRC28-215ENST00000559774 LOC107984640A0A0U1RRK4 108 aa5.6□□□□□ -1.51
LRRC28-215ENST00000559774 J3QQQ9 107 aa5.6□□□□□ -1.51
LRRC28-215ENST00000559774 COX17Q14061 63 aa5.6□□□□□ -1.51
LRRC28-215ENST00000559774 JOSD1Q15040 202 aaPredicted RBP5.6□□□□□ -1.51
LRRC28-215ENST00000559774 C2orf82Q6UX34 121 aa5.6□□□□□ -1.51
LRRC28-215ENST00000559774 UNQ6190/PRO20217Q6UXQ8 127 aa5.6□□□□□ -1.51
LRRC28-215ENST00000559774 LINC00526Q96FQ7 95 aa5.6□□□□□ -1.51
LRRC28-215ENST00000559774 ZNF625Q96I27 306 aaPredicted RBP5.6□□□□□ -1.51
LRRC28-215ENST00000559774 MYMXA0A1B0GTQ4 84 aa5.59□□□□□ -1.51
LRRC28-215ENST00000559774 HSBP1L1C9JCN9 74 aa5.59□□□□□ -1.51
LRRC28-215ENST00000559774 SCGB1D1O95968 90 aa5.59□□□□□ -1.51
LRRC28-215ENST00000559774 LGALS3P17931 250 aaKnown RBP5.59□□□□□ -1.51
LRRC28-215ENST00000559774 CIRBPQ14011 172 aaKnown RBP5.59□□□□□ -1.51
LRRC28-215ENST00000559774 C10orf25Q5T742 122 aa5.59□□□□□ -1.51
LRRC28-215ENST00000559774 C6orf48Q9UBA6 75 aa5.59□□□□□ -1.51
LRRC28-215ENST00000559774 NDUFA12Q9UI09 145 aa5.59□□□□□ -1.51
LRRC28-215ENST00000559774 NDUFC2-KCTD14E9PQ53 114 aa5.58□□□□□ -1.52
LRRC28-215ENST00000559774 Q6ZSA8 131 aa5.58□□□□□ -1.52
LRRC28-215ENST00000559774 STPG4Q8N801 248 aa5.58□□□□□ -1.52
LRRC28-215ENST00000559774 PKHD1P08F94 4074 aa5.57□□□□□ -1.52
LRRC28-215ENST00000559774 CDK2AP2O75956 126 aa5.57□□□□□ -1.52
LRRC28-215ENST00000559774 PTTG1IPP53801 180 aa5.57□□□□□ -1.52
LRRC28-215ENST00000559774 KRTAP10-1P60331 282 aa5.57□□□□□ -1.52
LRRC28-215ENST00000559774 DNAH5Q8TE73 4624 aa5.57□□□□□ -1.52
LRRC28-215ENST00000559774 ERG28Q9UKR5 140 aa5.56□□□□□ -1.52
LRRC28-215ENST00000559774 DYNC1H1Q14204 4646 aaKnown RBP5.56□□□□□ -1.52
LRRC28-215ENST00000559774 EPM2AB3EWF7 344 aa5.55□□□□□ -1.52
LRRC28-215ENST00000559774 FUSP35637 526 aaKnown RBP eCLIP5.55□□□□□ -1.52
LRRC28-215ENST00000559774 TSPEAR-AS2P59090 65 aa5.55□□□□□ -1.52
LRRC28-215ENST00000559774 LINC01620Q4KN68 170 aa5.55□□□□□ -1.52
LRRC28-215ENST00000559774 C4orf48Q5BLP8 95 aa5.55□□□□□ -1.52
LRRC28-215ENST00000559774 Q6ZRP5 223 aa5.55□□□□□ -1.52
LRRC28-215ENST00000559774 ATOH7Q8N100 152 aa5.55□□□□□ -1.52
LRRC28-215ENST00000559774 SPACA4Q8TDM5 124 aa5.55□□□□□ -1.52
LRRC28-215ENST00000559774 LRP1BQ9NZR2 4599 aa5.54□□□□□ -1.52
LRRC28-215ENST00000559774 A0A096LNI7 61 aa5.54□□□□□ -1.52
LRRC28-215ENST00000559774 IGKV2D-26A0A0A0MRZ7 120 aa5.54□□□□□ -1.52
LRRC28-215ENST00000559774 TIMM17BO60830 172 aa5.54□□□□□ -1.52
LRRC28-215ENST00000559774 RPL18AQ02543 176 aaKnown RBP5.54□□□□□ -1.52
LRRC28-215ENST00000559774 ANKRD39Q53RE8 183 aa5.54□□□□□ -1.52
LRRC28-215ENST00000559774 C9orf116Q5BN46 136 aaPredicted RBP5.54□□□□□ -1.52
LRRC28-215ENST00000559774 EPPK1P58107 5090 aaKnown RBP5.53□□□□□ -1.52
LRRC28-215ENST00000559774 ZNF815PA8K554 130 aa5.53□□□□□ -1.52
LRRC28-215ENST00000559774 GAGE2BQ13066 116 aa5.53□□□□□ -1.52
LRRC28-215ENST00000559774 PYY3Q5JQD4 70 aa5.53□□□□□ -1.52
LRRC28-215ENST00000559774 MEIG1Q5JSS6 88 aa5.53□□□□□ -1.52
LRRC28-215ENST00000559774 DPH3Q96FX2 82 aa5.53□□□□□ -1.52
LRRC28-215ENST00000559774 VAMP8Q9BV40 100 aa5.53□□□□□ -1.52
LRRC28-215ENST00000559774 PLAC8Q9NZF1 115 aa5.53□□□□□ -1.52
LRRC28-215ENST00000559774 FAM30AQ9NZY2 134 aa5.53□□□□□ -1.52
LRRC28-215ENST00000559774 PLA2G2DQ9UNK4 145 aa5.53□□□□□ -1.52
LRRC28-215ENST00000559774 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.53□□□□□ -1.52
LRRC28-215ENST00000559774 IGKV2-24A0A0C4DH68 120 aa5.52□□□□□ -1.53
LRRC28-215ENST00000559774 LOC107984156A0A0G2JMH3 177 aa5.52□□□□□ -1.53
LRRC28-215ENST00000559774 A0A0J9YXY3 114 aa5.52□□□□□ -1.53
LRRC28-215ENST00000559774 DLEU1O43261 78 aa5.52□□□□□ -1.53
LRRC28-215ENST00000559774 PFN2P35080 140 aa5.52□□□□□ -1.53
LRRC28-215ENST00000559774 LINC00158P58513 81 aa5.52□□□□□ -1.53
LRRC28-215ENST00000559774 MAJINQ3KP22 176 aa5.52□□□□□ -1.53
LRRC28-215ENST00000559774 GAGE2EQ4V326 116 aa5.52□□□□□ -1.53
LRRC28-215ENST00000559774 ARL17AQ8IVW1 177 aa5.52□□□□□ -1.53
LRRC28-215ENST00000559774 GAGE2DQ9UEU5 116 aa5.52□□□□□ -1.53
LRRC28-215ENST00000559774 A0A087WYN8 130 aa5.51□□□□□ -1.53
LRRC28-215ENST00000559774 SMIM13P0DJ93 91 aa5.51□□□□□ -1.53
LRRC28-215ENST00000559774 XGP55808 180 aa5.51□□□□□ -1.53
LRRC28-215ENST00000559774 Q6ZVH6 145 aa5.51□□□□□ -1.53
LRRC28-215ENST00000559774 CIRBP-AS1Q8TBR5 109 aa5.51□□□□□ -1.53
LRRC28-215ENST00000559774 COPS9Q8WXC6 57 aa5.51□□□□□ -1.53
LRRC28-215ENST00000559774 PPDPFQ9H3Y8 114 aa5.51□□□□□ -1.53
LRRC28-215ENST00000559774 DNAH8Q96JB1 4490 aa5.5□□□□□ -1.53
LRRC28-215ENST00000559774 TMEM238C9JI98 176 aa5.5□□□□□ -1.53
LRRC28-215ENST00000559774 PANO1I0J062 215 aa5.5□□□□□ -1.53
LRRC28-215ENST00000559774 CHTF8P0CG12 524 aa5.5□□□□□ -1.53
LRRC28-215ENST00000559774 COX8AP10176 69 aa5.5□□□□□ -1.53
LRRC28-215ENST00000559774 S100A12P80511 92 aa5.5□□□□□ -1.53
LRRC28-215ENST00000559774 SPATA45Q537H7 98 aa5.5□□□□□ -1.53
LRRC28-215ENST00000559774 C9orf129Q5T035 196 aaKnown RBP5.5□□□□□ -1.53
LRRC28-215ENST00000559774 SCGB1D4Q6XE38 83 aa5.5□□□□□ -1.53
LRRC28-215ENST00000559774 SCXQ7RTU7 201 aa5.5□□□□□ -1.53
LRRC28-215ENST00000559774 PCP2Q8IVA1 136 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms