RNA–Protein interactions for RNA: ENST00000558954.5

RABGGTA-208, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-208ENST00000558954 TRAV12-1A0A0B4J245 112 aa12.02□□□□□ -0.49
RABGGTA-208ENST00000558954 LEPROTL1O95214 131 aa12.02□□□□□ -0.49
RABGGTA-208ENST00000558954 CKS1BP61024 79 aa12.02□□□□□ -0.49
RABGGTA-208ENST00000558954 MAJINQ3KP22 176 aa12.02□□□□□ -0.49
RABGGTA-208ENST00000558954 C6orf226Q5I0X4 101 aa12.02□□□□□ -0.49
RABGGTA-208ENST00000558954 C2orf82Q6UX34 121 aa12.02□□□□□ -0.49
RABGGTA-208ENST00000558954 TRBV30A0A0K0K1B3 111 aa12.01□□□□□ -0.49
RABGGTA-208ENST00000558954 FAM229AH3BQW9 127 aa12.01□□□□□ -0.49
RABGGTA-208ENST00000558954 SPINK8P0C7L1 97 aa12.01□□□□□ -0.49
RABGGTA-208ENST00000558954 CXCL5P42830 114 aa12.01□□□□□ -0.49
RABGGTA-208ENST00000558954 C10orf25Q5T742 122 aa12.01□□□□□ -0.49
RABGGTA-208ENST00000558954 LINC00528Q8N1L1 170 aa12.01□□□□□ -0.49
RABGGTA-208ENST00000558954 CHTOPQ9Y3Y2 248 aaKnown RBP12.01□□□□□ -0.49
RABGGTA-208ENST00000558954 A0A087WYN8 130 aa12□□□□□ -0.49
RABGGTA-208ENST00000558954 NUPR1O60356 82 aa12□□□□□ -0.49
RABGGTA-208ENST00000558954 ZNF22P17026 224 aaPredicted RBP12□□□□□ -0.49
RABGGTA-208ENST00000558954 PTTG1IPP53801 180 aa12□□□□□ -0.49
RABGGTA-208ENST00000558954 RPL18AQ02543 176 aaKnown RBP12□□□□□ -0.49
RABGGTA-208ENST00000558954 C6orf48Q9UBA6 75 aa12□□□□□ -0.49
RABGGTA-208ENST00000558954 HSPB8Q9UJY1 196 aa12□□□□□ -0.49
RABGGTA-208ENST00000558954 C11orf86A6NJI1 115 aa11.99□□□□□ -0.49
RABGGTA-208ENST00000558954 GAGE2BQ13066 116 aa11.99□□□□□ -0.49
RABGGTA-208ENST00000558954 COX7B2Q8TF08 81 aa11.99□□□□□ -0.49
RABGGTA-208ENST00000558954 F8VRH5 84 aa11.98□□□□□ -0.49
RABGGTA-208ENST00000558954 KRTAP4-5Q9BYR2 181 aa11.98□□□□□ -0.49
RABGGTA-208ENST00000558954 PLAC8Q9NZF1 115 aa11.98□□□□□ -0.49
RABGGTA-208ENST00000558954 PCLOQ9Y6V0 5065 aa11.98□□□□□ -0.49
RABGGTA-208ENST00000558954 DNAH8Q96JB1 4490 aa11.98□□□□□ -0.49
RABGGTA-208ENST00000558954 TLX1NBP0CAT3 122 aa11.97□□□□□ -0.49
RABGGTA-208ENST00000558954 FABP4P15090 132 aa11.97□□□□□ -0.49
RABGGTA-208ENST00000558954 TMEM170BQ5T4T1 132 aa11.97□□□□□ -0.49
RABGGTA-208ENST00000558954 STPG4Q8N801 248 aa11.97□□□□□ -0.49
RABGGTA-208ENST00000558954 H0Y8G0 127 aa11.96□□□□□ -0.49
RABGGTA-208ENST00000558954 IGLV5-39A0A0G2JS06 123 aa11.95□□□□□ -0.5
RABGGTA-208ENST00000558954 PLA2G1BP04054 148 aaKnown RBP11.95□□□□□ -0.5
RABGGTA-208ENST00000558954 ODF1Q14990 250 aa11.94□□□□□ -0.5
RABGGTA-208ENST00000558954 NDUFC2-KCTD14E9PQ53 114 aa11.93□□□□□ -0.5
RABGGTA-208ENST00000558954 C9orf116Q5BN46 136 aaPredicted RBP11.92□□□□□ -0.5
RABGGTA-208ENST00000558954 COA6Q5JTJ3 125 aaKnown RBP11.92□□□□□ -0.5
RABGGTA-208ENST00000558954 Q6ZRP5 223 aa11.92□□□□□ -0.5
RABGGTA-208ENST00000558954 MAP1LC3CQ9BXW4 147 aa11.91□□□□□ -0.5
RABGGTA-208ENST00000558954 PLNP26678 52 aa11.9□□□□□ -0.5
RABGGTA-208ENST00000558954 GAGE2EQ4V326 116 aa11.9□□□□□ -0.5
RABGGTA-208ENST00000558954 C7orf33Q8WU49 177 aa11.9□□□□□ -0.5
RABGGTA-208ENST00000558954 GAGE2DQ9UEU5 116 aa11.9□□□□□ -0.5
RABGGTA-208ENST00000558954 TMEM223A0PJW6 202 aa11.89□□□□□ -0.51
RABGGTA-208ENST00000558954 RPL37AP61513 92 aaKnown RBP11.88□□□□□ -0.51
RABGGTA-208ENST00000558954 SFTA2Q6UW10 78 aa11.88□□□□□ -0.51
RABGGTA-208ENST00000558954 SRRM2Q9UQ35 2752 aaKnown RBP11.88□□□□□ -0.51
RABGGTA-208ENST00000558954 DPM2O94777 84 aa11.86□□□□□ -0.51
RABGGTA-208ENST00000558954 A0A1W2PNN7 141 aa11.84□□□□□ -0.51
RABGGTA-208ENST00000558954 SYS1-DBNDD2H3BUS1 97 aa11.84□□□□□ -0.51
RABGGTA-208ENST00000558954 PMCHL2Q9BQD1 86 aa11.84□□□□□ -0.51
RABGGTA-208ENST00000558954 IGKCP01834 107 aa11.83□□□□□ -0.52
RABGGTA-208ENST00000558954 INAFM2P0DMQ5 153 aa11.83□□□□□ -0.52
RABGGTA-208ENST00000558954 KRTAP10-4P60372 401 aaPredicted RBP11.83□□□□□ -0.52
RABGGTA-208ENST00000558954 FAT1Q14517 4588 aa11.82□□□□□ -0.52
RABGGTA-208ENST00000558954 FAM168BA1KXE4 195 aa11.82□□□□□ -0.52
RABGGTA-208ENST00000558954 C9orf129Q5T035 196 aaKnown RBP11.82□□□□□ -0.52
RABGGTA-208ENST00000558954 FAM19A5Q7Z5A7 132 aaPredicted RBP11.82□□□□□ -0.52
RABGGTA-208ENST00000558954 ZNF625Q96I27 306 aaPredicted RBP11.82□□□□□ -0.52
RABGGTA-208ENST00000558954 HERVK_113P61574 105 aa11.81□□□□□ -0.52
RABGGTA-208ENST00000558954 XAGE1AQ9HD64 81 aa11.81□□□□□ -0.52
RABGGTA-208ENST00000558954 PET117Q6UWS5 81 aa11.8□□□□□ -0.52
RABGGTA-208ENST00000558954 ERG28Q9UKR5 140 aa11.8□□□□□ -0.52
RABGGTA-208ENST00000558954 FLG2Q5D862 2391 aaPredicted RBP11.8□□□□□ -0.52
RABGGTA-208ENST00000558954 VPS13BQ7Z7G8 4022 aa11.79□□□□□ -0.52
RABGGTA-208ENST00000558954 PFN2P35080 140 aa11.79□□□□□ -0.52
RABGGTA-208ENST00000558954 COX17Q14061 63 aa11.79□□□□□ -0.52
RABGGTA-208ENST00000558954 LINC01545Q5VT33 79 aa11.78□□□□□ -0.52
RABGGTA-208ENST00000558954 PLEKHB2Q96CS7 222 aa11.78□□□□□ -0.52
RABGGTA-208ENST00000558954 M0QXV9 152 aa11.77□□□□□ -0.53
RABGGTA-208ENST00000558954 C3orf79P0CE67 100 aa11.77□□□□□ -0.53
RABGGTA-208ENST00000558954 KRTDAPP60985 99 aa11.77□□□□□ -0.53
RABGGTA-208ENST00000558954 PRR3P79522 188 aaKnown RBP11.77□□□□□ -0.53
RABGGTA-208ENST00000558954 PHF5AQ7RTV0 110 aaKnown RBP11.77□□□□□ -0.53
RABGGTA-208ENST00000558954 LEPROTO15243 131 aa11.76□□□□□ -0.53
RABGGTA-208ENST00000558954 S100A6P06703 90 aa11.76□□□□□ -0.53
RABGGTA-208ENST00000558954 HERV-K104P63124 156 aa11.76□□□□□ -0.53
RABGGTA-208ENST00000558954 NDUFA12Q9UI09 145 aa11.76□□□□□ -0.53
RABGGTA-208ENST00000558954 ABCA13Q86UQ4 5058 aa11.76□□□□□ -0.53
RABGGTA-208ENST00000558954 KRTAP7-1Q8IUC3 87 aa11.75□□□□□ -0.53
RABGGTA-208ENST00000558954 MYMXA0A1B0GTQ4 84 aa11.74□□□□□ -0.53
RABGGTA-208ENST00000558954 C20orf202A1L168 122 aa11.74□□□□□ -0.53
RABGGTA-208ENST00000558954 TSPEAR-AS2P59090 65 aa11.74□□□□□ -0.53
RABGGTA-208ENST00000558954 J3QQQ9 107 aa11.73□□□□□ -0.53
RABGGTA-208ENST00000558954 S100A2P29034 98 aa11.73□□□□□ -0.53
RABGGTA-208ENST00000558954 SERTAD4-AS1Q5TG53 156 aa11.73□□□□□ -0.53
RABGGTA-208ENST00000558954 LGALS3P17931 250 aaKnown RBP11.72□□□□□ -0.53
RABGGTA-208ENST00000558954 NMUP48645 174 aa11.72□□□□□ -0.53
RABGGTA-208ENST00000558954 LINC00158P58513 81 aa11.72□□□□□ -0.53
RABGGTA-208ENST00000558954 HIST3H2BBQ8N257 126 aa11.72□□□□□ -0.53
RABGGTA-208ENST00000558954 SND1-IT1Q9HBX3 110 aa11.72□□□□□ -0.53
RABGGTA-208ENST00000558954 PLA2G2DQ9UNK4 145 aa11.72□□□□□ -0.53
RABGGTA-208ENST00000558954 LINC00587B1AMM8 73 aa11.71□□□□□ -0.53
RABGGTA-208ENST00000558954 E9PLD3 99 aa11.71□□□□□ -0.53
RABGGTA-208ENST00000558954 UBE2BP63146 152 aa11.71□□□□□ -0.53
RABGGTA-208ENST00000558954 MEIG1Q5JSS6 88 aa11.71□□□□□ -0.53
RABGGTA-208ENST00000558954 TP73-AS1Q9UF72 201 aa11.71□□□□□ -0.53
RABGGTA-208ENST00000558954 HNRNPA3P51991 378 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 680.3 ms