RNA–Protein interactions for RNA: ENST00000557422.1

RTN1-208, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-208ENST00000557422 AMMECR1LQ6DCA0 310 aa7.39□□□□□ -1.23
RTN1-208ENST00000557422 CYSLTR1Q9Y271 337 aa7.39□□□□□ -1.23
RTN1-208ENST00000557422 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.38□□□□□ -1.23
RTN1-208ENST00000557422 TSHBP01222 138 aa7.38□□□□□ -1.23
RTN1-208ENST00000557422 NPSP0C0P6 89 aa7.38□□□□□ -1.23
RTN1-208ENST00000557422 XCL1P47992 114 aa7.38□□□□□ -1.23
RTN1-208ENST00000557422 GAGE2BQ13066 116 aa7.38□□□□□ -1.23
RTN1-208ENST00000557422 C2orf66Q6UXQ4 117 aa7.38□□□□□ -1.23
RTN1-208ENST00000557422 LINC00173Q6ZV60 143 aa7.38□□□□□ -1.23
RTN1-208ENST00000557422 ERASQ7Z444 233 aa7.38□□□□□ -1.23
RTN1-208ENST00000557422 TMEM141Q96I45 108 aa7.38□□□□□ -1.23
RTN1-208ENST00000557422 TRAV12-1A0A0B4J245 112 aa7.37□□□□□ -1.23
RTN1-208ENST00000557422 LOC107984640A0A0U1RRK4 108 aa7.37□□□□□ -1.23
RTN1-208ENST00000557422 C1orf137Q5JT78 98 aa7.37□□□□□ -1.23
RTN1-208ENST00000557422 DIRC1Q969H9 104 aa7.37□□□□□ -1.23
RTN1-208ENST00000557422 SCGB3A1Q96QR1 104 aa7.37□□□□□ -1.23
RTN1-208ENST00000557422 TIMM17AQ99595 171 aa7.37□□□□□ -1.23
RTN1-208ENST00000557422 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.36□□□□□ -1.23
RTN1-208ENST00000557422 IGKV2-29A2NJV5 120 aaPredicted RBP7.36□□□□□ -1.23
RTN1-208ENST00000557422 ZNF561-AS1K7EIQ3 104 aa7.36□□□□□ -1.23
RTN1-208ENST00000557422 FGF6P10767 208 aa7.36□□□□□ -1.23
RTN1-208ENST00000557422 SMAGPQ0VAQ4 97 aa7.36□□□□□ -1.23
RTN1-208ENST00000557422 Q6ZN92 141 aa7.36□□□□□ -1.23
RTN1-208ENST00000557422 OR5A1Q8NGJ0 315 aa7.36□□□□□ -1.23
RTN1-208ENST00000557422 LINC00959A0A1B0GUT2 108 aa7.35□□□□□ -1.23
RTN1-208ENST00000557422 IGIPA6NJ69 53 aa7.35□□□□□ -1.23
RTN1-208ENST00000557422 H7C423 109 aa7.35□□□□□ -1.23
RTN1-208ENST00000557422 CCL25O15444 150 aa7.35□□□□□ -1.23
RTN1-208ENST00000557422 IGLV7-43P04211 117 aa7.35□□□□□ -1.23
RTN1-208ENST00000557422 C9orf116Q5BN46 136 aaPredicted RBP7.35□□□□□ -1.23
RTN1-208ENST00000557422 PAPPA-AS1Q5QFB9 102 aa7.35□□□□□ -1.23
RTN1-208ENST00000557422 VAMP8Q9BV40 100 aa7.35□□□□□ -1.23
RTN1-208ENST00000557422 PYGO1Q9Y3Y4 419 aa7.35□□□□□ -1.23
RTN1-208ENST00000557422 FAT4Q6V0I7 4981 aa7.35□□□□□ -1.23
RTN1-208ENST00000557422 IGLV1-50A0A075B6I6 118 aa7.34□□□□□ -1.23
RTN1-208ENST00000557422 HSBP1L1C9JCN9 74 aa7.34□□□□□ -1.23
RTN1-208ENST00000557422 TSTD3H0UI37 97 aa7.34□□□□□ -1.23
RTN1-208ENST00000557422 PHF5AQ7RTV0 110 aaKnown RBP7.34□□□□□ -1.23
RTN1-208ENST00000557422 H0Y9J4 135 aa7.33□□□□□ -1.24
RTN1-208ENST00000557422 TIMM21Q9BVV7 248 aa7.33□□□□□ -1.24
RTN1-208ENST00000557422 SPANXA1Q9NS26 97 aa7.33□□□□□ -1.24
RTN1-208ENST00000557422 IGLV4-69A0A075B6H9 119 aa7.32□□□□□ -1.24
RTN1-208ENST00000557422 KRTAP1-4P0C5Y4 121 aa7.32□□□□□ -1.24
RTN1-208ENST00000557422 ZNF25P17030 456 aaPredicted RBP7.32□□□□□ -1.24
RTN1-208ENST00000557422 PLNP26678 52 aa7.32□□□□□ -1.24
RTN1-208ENST00000557422 PMVKQ15126 192 aa7.32□□□□□ -1.24
RTN1-208ENST00000557422 CD164L2Q6UWJ8 174 aa7.32□□□□□ -1.24
RTN1-208ENST00000557422 F8VRH5 84 aa7.31□□□□□ -1.24
RTN1-208ENST00000557422 H0Y8G0 127 aa7.31□□□□□ -1.24
RTN1-208ENST00000557422 DPM2O94777 84 aa7.31□□□□□ -1.24
RTN1-208ENST00000557422 APOMO95445 188 aa7.31□□□□□ -1.24
RTN1-208ENST00000557422 RPL39P62891 51 aaKnown RBP7.31□□□□□ -1.24
RTN1-208ENST00000557422 SS18Q15532 418 aa7.31□□□□□ -1.24
RTN1-208ENST00000557422 CSDC2Q9Y534 153 aaKnown RBP7.31□□□□□ -1.24
RTN1-208ENST00000557422 IGKCP01834 107 aa7.3□□□□□ -1.24
RTN1-208ENST00000557422 MRPS36P82909 103 aaKnown RBP7.3□□□□□ -1.24
RTN1-208ENST00000557422 SPATA45Q537H7 98 aa7.3□□□□□ -1.24
RTN1-208ENST00000557422 KRTAP11-1Q8IUC1 163 aa7.3□□□□□ -1.24
RTN1-208ENST00000557422 TMEM101Q96IK0 257 aa7.3□□□□□ -1.24
RTN1-208ENST00000557422 PAM16Q9Y3D7 125 aa7.3□□□□□ -1.24
RTN1-208ENST00000557422 A0A087WZ39 114 aa7.29□□□□□ -1.24
RTN1-208ENST00000557422 RPL18AQ02543 176 aaKnown RBP7.29□□□□□ -1.24
RTN1-208ENST00000557422 MRPL52Q86TS9 123 aaKnown RBP7.29□□□□□ -1.24
RTN1-208ENST00000557422 CAMK2N2Q96S95 79 aa7.29□□□□□ -1.24
RTN1-208ENST00000557422 VCX2Q9H322 139 aa7.29□□□□□ -1.24
RTN1-208ENST00000557422 CST9LQ9H4G1 147 aa7.29□□□□□ -1.24
RTN1-208ENST00000557422 UBE2D4Q9Y2X8 147 aa7.29□□□□□ -1.24
RTN1-208ENST00000557422 CHTOPQ9Y3Y2 248 aaKnown RBP7.29□□□□□ -1.24
RTN1-208ENST00000557422 IGLV4-3A0A075B6K6 122 aa7.28□□□□□ -1.24
RTN1-208ENST00000557422 UBE2D1P51668 147 aa7.28□□□□□ -1.24
RTN1-208ENST00000557422 ATOH7Q8N100 152 aa7.28□□□□□ -1.24
RTN1-208ENST00000557422 AMELXQ99217 191 aa7.28□□□□□ -1.24
RTN1-208ENST00000557422 CDC42SE2Q9NRR3 84 aa7.28□□□□□ -1.24
RTN1-208ENST00000557422 MRPL35Q9NZE8 188 aaKnown RBP7.28□□□□□ -1.24
RTN1-208ENST00000557422 MALP21145 153 aa7.27□□□□□ -1.25
RTN1-208ENST00000557422 RPL13AP40429 203 aaKnown RBP7.27□□□□□ -1.25
RTN1-208ENST00000557422 C2orf48Q96LS8 159 aa7.27□□□□□ -1.25
RTN1-208ENST00000557422 OPRPNQ99935 248 aaPredicted RBP7.27□□□□□ -1.25
RTN1-208ENST00000557422 PMCHL2Q9BQD1 86 aa7.27□□□□□ -1.25
RTN1-208ENST00000557422 MIEN1Q9BRT3 115 aa7.27□□□□□ -1.25
RTN1-208ENST00000557422 UQCR10Q9UDW1 63 aa7.27□□□□□ -1.25
RTN1-208ENST00000557422 PCP4L1A6NKN8 68 aa7.26□□□□□ -1.25
RTN1-208ENST00000557422 COX7A2LO14548 114 aa7.26□□□□□ -1.25
RTN1-208ENST00000557422 IGLC3P0DOY3 106 aa7.26□□□□□ -1.25
RTN1-208ENST00000557422 C2orf88Q9BSF0 95 aa7.26□□□□□ -1.25
RTN1-208ENST00000557422 PRO1933Q9H354 126 aa7.26□□□□□ -1.25
RTN1-208ENST00000557422 FAM168BA1KXE4 195 aa7.25□□□□□ -1.25
RTN1-208ENST00000557422 DDTP30046 118 aa7.25□□□□□ -1.25
RTN1-208ENST00000557422 RNF151Q2KHN1 245 aa7.25□□□□□ -1.25
RTN1-208ENST00000557422 DLEU1O43261 78 aa7.24□□□□□ -1.25
RTN1-208ENST00000557422 TSPAN13O95857 204 aa7.24□□□□□ -1.25
RTN1-208ENST00000557422 SEC11AP67812 179 aa7.24□□□□□ -1.25
RTN1-208ENST00000557422 ZC2HC1BQ5TFG8 222 aa7.24□□□□□ -1.25
RTN1-208ENST00000557422 FAM104AQ969W3 186 aa7.24□□□□□ -1.25
RTN1-208ENST00000557422 C11orf86A6NJI1 115 aa7.23□□□□□ -1.25
RTN1-208ENST00000557422 COX8AP10176 69 aa7.23□□□□□ -1.25
RTN1-208ENST00000557422 HERVK_113P61574 105 aa7.23□□□□□ -1.25
RTN1-208ENST00000557422 SLC25A34Q6PIV7 304 aa7.23□□□□□ -1.25
RTN1-208ENST00000557422 FAM19A3Q7Z5A8 133 aa7.23□□□□□ -1.25
RTN1-208ENST00000557422 TINCRA0A1B0GVN0 87 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms