RNA–Protein interactions for RNA: ENST00000556956.1

SLIRP-208, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-208ENST00000556956 KNTC1P50748 2209 aa1.99□□□□□ -2.09
SLIRP-208ENST00000556956 SPENQ96T58 3664 aaKnown RBP1.99□□□□□ -2.09
SLIRP-208ENST00000556956 FAM186AA6NE01 2351 aa1.99□□□□□ -2.09
SLIRP-208ENST00000556956 HEATR1Q9H583 2144 aaKnown RBP1.99□□□□□ -2.09
SLIRP-208ENST00000556956 DMXL1Q9Y485 3027 aa1.98□□□□□ -2.09
SLIRP-208ENST00000556956 IGHV3OR16-9A0A0B4J2B5 98 aa1.98□□□□□ -2.09
SLIRP-208ENST00000556956 TRGV4A0A0C4DH28 118 aa1.98□□□□□ -2.09
SLIRP-208ENST00000556956 LINC00959A0A1B0GUT2 108 aa1.98□□□□□ -2.09
SLIRP-208ENST00000556956 A0A1W2PPR1 153 aa1.98□□□□□ -2.09
SLIRP-208ENST00000556956 H7BZZ5 65 aa1.98□□□□□ -2.09
SLIRP-208ENST00000556956 ERC2-IT1O76042 136 aa1.98□□□□□ -2.09
SLIRP-208ENST00000556956 PRM2P04554 102 aa1.98□□□□□ -2.09
SLIRP-208ENST00000556956 KRTAP10-1P60331 282 aa1.98□□□□□ -2.09
SLIRP-208ENST00000556956 CXCL6P80162 114 aa1.98□□□□□ -2.09
SLIRP-208ENST00000556956 KLKP1Q107X0 134 aa1.98□□□□□ -2.09
SLIRP-208ENST00000556956 COX17Q14061 63 aa1.98□□□□□ -2.09
SLIRP-208ENST00000556956 DEFB114Q30KQ6 69 aa1.98□□□□□ -2.09
SLIRP-208ENST00000556956 DEFB112Q30KQ8 113 aa1.98□□□□□ -2.09
SLIRP-208ENST00000556956 LINC00575Q6W349 94 aa1.98□□□□□ -2.09
SLIRP-208ENST00000556956 Q6ZQT0 140 aa1.98□□□□□ -2.09
SLIRP-208ENST00000556956 ZGRF1Q86YA3 2104 aa1.98□□□□□ -2.09
SLIRP-208ENST00000556956 Q8IZM0 81 aa1.98□□□□□ -2.09
SLIRP-208ENST00000556956 C6orf223Q8N319 242 aa1.98□□□□□ -2.09
SLIRP-208ENST00000556956 WFDC9Q8NEX5 89 aa1.98□□□□□ -2.09
SLIRP-208ENST00000556956 MUC7Q8TAX7 377 aa1.98□□□□□ -2.09
SLIRP-208ENST00000556956 C16orf74Q96GX8 76 aa1.98□□□□□ -2.09
SLIRP-208ENST00000556956 CCL19Q99731 98 aa1.98□□□□□ -2.09
SLIRP-208ENST00000556956 LAMTOR3Q9UHA4 124 aa1.98□□□□□ -2.09
SLIRP-208ENST00000556956 CEP250Q9BV73 2442 aa1.98□□□□□ -2.09
SLIRP-208ENST00000556956 FREM2Q5SZK8 3169 aa1.98□□□□□ -2.09
SLIRP-208ENST00000556956 CNOT1A5YKK6 2376 aaKnown RBP1.98□□□□□ -2.09
SLIRP-208ENST00000556956 BSNQ9UPA5 3926 aa1.97□□□□□ -2.09
SLIRP-208ENST00000556956 GVINP1Q7Z2Y8 2422 aa1.97□□□□□ -2.09
SLIRP-208ENST00000556956 NAV3Q8IVL0 2385 aa1.97□□□□□ -2.09
SLIRP-208ENST00000556956 TRGV2A0A075B6R0 118 aa1.97□□□□□ -2.09
SLIRP-208ENST00000556956 TRBV6-8A0A0A6YYG3 113 aa1.97□□□□□ -2.09
SLIRP-208ENST00000556956 IGKV3OR2-268A0A0C4DH90 116 aa1.97□□□□□ -2.09
SLIRP-208ENST00000556956 F8WDY8 70 aa1.97□□□□□ -2.09
SLIRP-208ENST00000556956 F8WEM9 126 aa1.97□□□□□ -2.09
SLIRP-208ENST00000556956 IGHV4-59P01825 116 aa1.97□□□□□ -2.09
SLIRP-208ENST00000556956 MIFP14174 115 aa1.97□□□□□ -2.09
SLIRP-208ENST00000556956 LINC01547P58512 204 aaPredicted RBP1.97□□□□□ -2.09
SLIRP-208ENST00000556956 HAMPP81172 84 aa1.97□□□□□ -2.09
SLIRP-208ENST00000556956 C10orf99Q6UWK7 81 aa1.97□□□□□ -2.09
SLIRP-208ENST00000556956 Q6ZTI0 123 aa1.97□□□□□ -2.09
SLIRP-208ENST00000556956 Q6ZVQ6 151 aa1.97□□□□□ -2.09
SLIRP-208ENST00000556956 C1orf158Q8N1D5 194 aa1.97□□□□□ -2.09
SLIRP-208ENST00000556956 C4orf3Q8WVX3 66 aa1.97□□□□□ -2.09
SLIRP-208ENST00000556956 ZNF702PQ9H963 129 aa1.97□□□□□ -2.09
SLIRP-208ENST00000556956 NOP10Q9NPE3 64 aaKnown RBP1.97□□□□□ -2.09
SLIRP-208ENST00000556956 MALRD1Q5VYJ5 2156 aa1.97□□□□□ -2.09
SLIRP-208ENST00000556956 SVILO95425 2214 aa1.97□□□□□ -2.09
SLIRP-208ENST00000556956 CFAP54Q96N23 3096 aa1.96□□□□□ -2.1
SLIRP-208ENST00000556956 EP300Q09472 2414 aaPredicted RBP1.96□□□□□ -2.1
SLIRP-208ENST00000556956 IGLV4-60A0A075B6I1 120 aa1.96□□□□□ -2.1
SLIRP-208ENST00000556956 IGHV4-30-2A0A087WSY4 118 aa1.96□□□□□ -2.1
SLIRP-208ENST00000556956 TRAV10A0A0B4J240 114 aa1.96□□□□□ -2.1
SLIRP-208ENST00000556956 TRBV7-6A0A0J9YX20 115 aa1.96□□□□□ -2.1
SLIRP-208ENST00000556956 C6orf99Q4VX62 202 aa1.96□□□□□ -2.1
SLIRP-208ENST00000556956 C9orf66Q5T8R8 295 aa1.96□□□□□ -2.1
SLIRP-208ENST00000556956 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.96□□□□□ -2.1
SLIRP-208ENST00000556956 LINC00336Q6ZUF6 198 aa1.96□□□□□ -2.1
SLIRP-208ENST00000556956 RMI2Q96E14 147 aa1.96□□□□□ -2.1
SLIRP-208ENST00000556956 C11orf68Q9H3H3 251 aaKnown RBP1.96□□□□□ -2.1
SLIRP-208ENST00000556956 SNURFQ9Y675 71 aa1.96□□□□□ -2.1
SLIRP-208ENST00000556956 AKAP13Q12802 2813 aa1.96□□□□□ -2.1
SLIRP-208ENST00000556956 PLXNB1O43157 2135 aa1.96□□□□□ -2.1
SLIRP-208ENST00000556956 ARFGEF3Q5TH69 2177 aa1.95□□□□□ -2.1
SLIRP-208ENST00000556956 A0A096LNT2 108 aa1.95□□□□□ -2.1
SLIRP-208ENST00000556956 LOC100131303A0A0U1RQF7 123 aa1.95□□□□□ -2.1
SLIRP-208ENST00000556956 CCL24O00175 119 aa1.95□□□□□ -2.1
SLIRP-208ENST00000556956 RPL35AP18077 110 aaKnown RBP1.95□□□□□ -2.1
SLIRP-208ENST00000556956 C1orf195Q5TG92 126 aa1.95□□□□□ -2.1
SLIRP-208ENST00000556956 CD164L2Q6UWJ8 174 aa1.95□□□□□ -2.1
SLIRP-208ENST00000556956 FP248Q71RG6 208 aaPredicted RBP1.95□□□□□ -2.1
SLIRP-208ENST00000556956 C16orf95Q9H693 158 aa1.95□□□□□ -2.1
SLIRP-208ENST00000556956 V9GYY9 64 aa1.95□□□□□ -2.1
SLIRP-208ENST00000556956 RIF1Q5UIP0 2472 aaKnown RBP1.95□□□□□ -2.1
SLIRP-208ENST00000556956 ACACAQ13085 2346 aa1.95□□□□□ -2.1
SLIRP-208ENST00000556956 PTPRQQ9UMZ3 2332 aa1.95□□□□□ -2.1
SLIRP-208ENST00000556956 MUC4Q99102 2169 aa1.95□□□□□ -2.1
SLIRP-208ENST00000556956 ANKRD11Q6UB99 2663 aaPredicted RBP1.94□□□□□ -2.1
SLIRP-208ENST00000556956 ASPMQ8IZT6 3477 aa1.94□□□□□ -2.1
SLIRP-208ENST00000556956 FRYQ5TBA9 3013 aa1.94□□□□□ -2.1
SLIRP-208ENST00000556956 TRBV7-4A0A0J9YYF1 115 aa1.94□□□□□ -2.1
SLIRP-208ENST00000556956 C19orf84I3L1E1 186 aa1.94□□□□□ -2.1
SLIRP-208ENST00000556956 BPY2O14599 106 aa1.94□□□□□ -2.1
SLIRP-208ENST00000556956 COX7BP24311 80 aa1.94□□□□□ -2.1
SLIRP-208ENST00000556956 FUSP35637 526 aaKnown RBP eCLIP1.94□□□□□ -2.1
SLIRP-208ENST00000556956 PRR3P79522 188 aaKnown RBP1.94□□□□□ -2.1
SLIRP-208ENST00000556956 KIAA0087Q14695 138 aa1.94□□□□□ -2.1
SLIRP-208ENST00000556956 NREPQ16612 68 aa1.94□□□□□ -2.1
SLIRP-208ENST00000556956 DEFB136Q30KP8 78 aa1.94□□□□□ -2.1
SLIRP-208ENST00000556956 ZNF843Q8N446 348 aa1.94□□□□□ -2.1
SLIRP-208ENST00000556956 WFDC11Q8NEX6 87 aa1.94□□□□□ -2.1
SLIRP-208ENST00000556956 TMEM254Q8TBM7 123 aa1.94□□□□□ -2.1
SLIRP-208ENST00000556956 BRK1Q8WUW1 75 aa1.94□□□□□ -2.1
SLIRP-208ENST00000556956 DIRC1Q969H9 104 aa1.94□□□□□ -2.1
SLIRP-208ENST00000556956 PKIGQ9Y2B9 76 aa1.94□□□□□ -2.1
SLIRP-208ENST00000556956 CADP27708 2225 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms