RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 LINC01545Q5VT33 79 aa4.93□□□□□ -1.62
HNRNPC-226ENST00000556628 LINC00173Q6ZV60 143 aa4.93□□□□□ -1.62
HNRNPC-226ENST00000556628 ZNF664Q8N3J9 261 aa4.93□□□□□ -1.62
HNRNPC-226ENST00000556628 PKIGQ9Y2B9 76 aa4.93□□□□□ -1.62
HNRNPC-226ENST00000556628 DNAH8Q96JB1 4490 aa4.93□□□□□ -1.62
HNRNPC-226ENST00000556628 SRRM2Q9UQ35 2752 aaKnown RBP4.92□□□□□ -1.62
HNRNPC-226ENST00000556628 HSBP1L1C9JCN9 74 aa4.92□□□□□ -1.62
HNRNPC-226ENST00000556628 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.92□□□□□ -1.62
HNRNPC-226ENST00000556628 HIGD2BQ4VC39 106 aa4.92□□□□□ -1.62
HNRNPC-226ENST00000556628 C15orf56Q8N910 161 aa4.92□□□□□ -1.62
HNRNPC-226ENST00000556628 TOMM6Q96B49 74 aa4.92□□□□□ -1.62
HNRNPC-226ENST00000556628 CYSLTR1Q9Y271 337 aa4.92□□□□□ -1.62
HNRNPC-226ENST00000556628 FLG2Q5D862 2391 aaPredicted RBP4.91□□□□□ -1.62
HNRNPC-226ENST00000556628 DMBT1Q9UGM3 2413 aaPredicted RBP4.91□□□□□ -1.62
HNRNPC-226ENST00000556628 FAT1Q14517 4588 aa4.91□□□□□ -1.62
HNRNPC-226ENST00000556628 IGHV1-58A0A0C4DH39 117 aa4.91□□□□□ -1.62
HNRNPC-226ENST00000556628 LINC00959A0A1B0GUT2 108 aa4.91□□□□□ -1.62
HNRNPC-226ENST00000556628 H0Y8G0 127 aa4.91□□□□□ -1.62
HNRNPC-226ENST00000556628 PANO1I0J062 215 aa4.91□□□□□ -1.62
HNRNPC-226ENST00000556628 CCL25O15444 150 aa4.91□□□□□ -1.62
HNRNPC-226ENST00000556628 TSHBP01222 138 aa4.91□□□□□ -1.62
HNRNPC-226ENST00000556628 DDTP30046 118 aa4.91□□□□□ -1.62
HNRNPC-226ENST00000556628 XCL1P47992 114 aa4.91□□□□□ -1.62
HNRNPC-226ENST00000556628 KRTAP10-4P60372 401 aaPredicted RBP4.91□□□□□ -1.62
HNRNPC-226ENST00000556628 FOXI1Q12951 378 aa4.91□□□□□ -1.62
HNRNPC-226ENST00000556628 CIRBPQ14011 172 aaKnown RBP4.91□□□□□ -1.62
HNRNPC-226ENST00000556628 SPATA45Q537H7 98 aa4.91□□□□□ -1.62
HNRNPC-226ENST00000556628 C2orf66Q6UXQ4 117 aa4.91□□□□□ -1.62
HNRNPC-226ENST00000556628 Q6ZN92 141 aa4.91□□□□□ -1.62
HNRNPC-226ENST00000556628 ERASQ7Z444 233 aa4.91□□□□□ -1.62
HNRNPC-226ENST00000556628 MRPL52Q86TS9 123 aaKnown RBP4.91□□□□□ -1.62
HNRNPC-226ENST00000556628 C7orf33Q8WU49 177 aa4.91□□□□□ -1.62
HNRNPC-226ENST00000556628 SCGB3A1Q96QR1 104 aa4.91□□□□□ -1.62
HNRNPC-226ENST00000556628 PRO1933Q9H354 126 aa4.91□□□□□ -1.62
HNRNPC-226ENST00000556628 PAM16Q9Y3D7 125 aa4.91□□□□□ -1.62
HNRNPC-226ENST00000556628 A0A087WYN8 130 aa4.9□□□□□ -1.63
HNRNPC-226ENST00000556628 GVQW2A0A096LPI5 108 aaPredicted RBP4.9□□□□□ -1.63
HNRNPC-226ENST00000556628 TRAV12-1A0A0B4J245 112 aa4.9□□□□□ -1.63
HNRNPC-226ENST00000556628 CHTF8P0CG12 524 aa4.9□□□□□ -1.63
HNRNPC-226ENST00000556628 COX6A2Q02221 97 aa4.9□□□□□ -1.63
HNRNPC-226ENST00000556628 SERTAD4-AS1Q5TG53 156 aa4.9□□□□□ -1.63
HNRNPC-226ENST00000556628 ATOH7Q8N100 152 aa4.9□□□□□ -1.63
HNRNPC-226ENST00000556628 SPACA4Q8TDM5 124 aa4.9□□□□□ -1.63
HNRNPC-226ENST00000556628 TMEM141Q96I45 108 aa4.9□□□□□ -1.63
HNRNPC-226ENST00000556628 IGKV2-24A0A0C4DH68 120 aa4.89□□□□□ -1.63
HNRNPC-226ENST00000556628 MAJINQ3KP22 176 aa4.89□□□□□ -1.63
HNRNPC-226ENST00000556628 PAPPA-AS1Q5QFB9 102 aa4.89□□□□□ -1.63
HNRNPC-226ENST00000556628 TIMM17AQ99595 171 aa4.89□□□□□ -1.63
HNRNPC-226ENST00000556628 MIEN1Q9BRT3 115 aa4.89□□□□□ -1.63
HNRNPC-226ENST00000556628 CDC42SE2Q9NRR3 84 aa4.89□□□□□ -1.63
HNRNPC-226ENST00000556628 LINC00474Q9P2X8 69 aa4.89□□□□□ -1.63
HNRNPC-226ENST00000556628 UQCR10Q9UDW1 63 aa4.89□□□□□ -1.63
HNRNPC-226ENST00000556628 IGIPA6NJ69 53 aa4.88□□□□□ -1.63
HNRNPC-226ENST00000556628 DPM2O94777 84 aa4.88□□□□□ -1.63
HNRNPC-226ENST00000556628 NPSP0C0P6 89 aa4.88□□□□□ -1.63
HNRNPC-226ENST00000556628 PLNP26678 52 aa4.88□□□□□ -1.63
HNRNPC-226ENST00000556628 CD164L2Q6UWJ8 174 aa4.88□□□□□ -1.63
HNRNPC-226ENST00000556628 STPG4Q8N801 248 aa4.88□□□□□ -1.63
HNRNPC-226ENST00000556628 CARD19Q96LW7 228 aa4.88□□□□□ -1.63
HNRNPC-226ENST00000556628 PLAC8Q9NZF1 115 aa4.88□□□□□ -1.63
HNRNPC-226ENST00000556628 CSDC2Q9Y534 153 aaKnown RBP4.88□□□□□ -1.63
HNRNPC-226ENST00000556628 LINC00587B1AMM8 73 aa4.87□□□□□ -1.63
HNRNPC-226ENST00000556628 F8VRH5 84 aa4.87□□□□□ -1.63
HNRNPC-226ENST00000556628 COX7A2LO14548 114 aa4.87□□□□□ -1.63
HNRNPC-226ENST00000556628 APOMO95445 188 aa4.87□□□□□ -1.63
HNRNPC-226ENST00000556628 IGKCP01834 107 aa4.87□□□□□ -1.63
HNRNPC-226ENST00000556628 IGLC3P0DOY3 106 aa4.87□□□□□ -1.63
HNRNPC-226ENST00000556628 SYCNQ0VAF6 134 aa4.87□□□□□ -1.63
HNRNPC-226ENST00000556628 PMVKQ15126 192 aa4.87□□□□□ -1.63
HNRNPC-226ENST00000556628 Q6ZRU5 148 aa4.87□□□□□ -1.63
HNRNPC-226ENST00000556628 PMCHL2Q9BQD1 86 aa4.87□□□□□ -1.63
HNRNPC-226ENST00000556628 UBE2D4Q9Y2X8 147 aa4.87□□□□□ -1.63
HNRNPC-226ENST00000556628 CHTOPQ9Y3Y2 248 aaKnown RBP4.87□□□□□ -1.63
HNRNPC-226ENST00000556628 PYGO1Q9Y3Y4 419 aa4.87□□□□□ -1.63
HNRNPC-226ENST00000556628 MYCBP2O75592 4640 aa4.86□□□□□ -1.63
HNRNPC-226ENST00000556628 A0A096LNI7 61 aa4.86□□□□□ -1.63
HNRNPC-226ENST00000556628 TRAV13-1A0A0B4J241 112 aa4.86□□□□□ -1.63
HNRNPC-226ENST00000556628 HNRNPA3P51991 378 aaKnown RBP4.86□□□□□ -1.63
HNRNPC-226ENST00000556628 RPL39P62891 51 aaKnown RBP4.86□□□□□ -1.63
HNRNPC-226ENST00000556628 LINC00526Q96FQ7 95 aa4.86□□□□□ -1.63
HNRNPC-226ENST00000556628 TIMM21Q9BVV7 248 aa4.86□□□□□ -1.63
HNRNPC-226ENST00000556628 SPANXA1Q9NS26 97 aa4.86□□□□□ -1.63
HNRNPC-226ENST00000556628 MRPL35Q9NZE8 188 aaKnown RBP4.86□□□□□ -1.63
HNRNPC-226ENST00000556628 IGLV4-69A0A075B6H9 119 aa4.85□□□□□ -1.63
HNRNPC-226ENST00000556628 LOC107984640A0A0U1RRK4 108 aa4.85□□□□□ -1.63
HNRNPC-226ENST00000556628 RNASE13Q5GAN3 156 aaKnown RBP4.85□□□□□ -1.63
HNRNPC-226ENST00000556628 SLC25A34Q6PIV7 304 aa4.85□□□□□ -1.63
HNRNPC-226ENST00000556628 Q6ZUT4 128 aa4.85□□□□□ -1.63
HNRNPC-226ENST00000556628 CAMK2N2Q96S95 79 aa4.85□□□□□ -1.63
HNRNPC-226ENST00000556628 VCX2Q9H322 139 aa4.85□□□□□ -1.63
HNRNPC-226ENST00000556628 HERC1Q15751 4861 aa4.84□□□□□ -1.63
HNRNPC-226ENST00000556628 COX8AP10176 69 aa4.84□□□□□ -1.63
HNRNPC-226ENST00000556628 GAGE2BQ13066 116 aa4.84□□□□□ -1.63
HNRNPC-226ENST00000556628 LBHQ53QV2 105 aaPredicted RBP4.84□□□□□ -1.63
HNRNPC-226ENST00000556628 ZC2HC1BQ5TFG8 222 aa4.84□□□□□ -1.63
HNRNPC-226ENST00000556628 C5orf38Q86SI9 138 aa4.84□□□□□ -1.63
HNRNPC-226ENST00000556628 C14orf144Q96I85 54 aa4.84□□□□□ -1.63
HNRNPC-226ENST00000556628 CST9LQ9H4G1 147 aa4.84□□□□□ -1.63
HNRNPC-226ENST00000556628 IGLV4-3A0A075B6K6 122 aa4.83□□□□□ -1.64
HNRNPC-226ENST00000556628 DLEU1O43261 78 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms