RNA–Protein interactions for RNA: ENST00000556555.1

NDUFB1-205, Transcript of NADH:ubiquinone oxidoreductase subunit B1, humanhuman

TSL 3

Gene NDUFB1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB1-205ENST00000556555 C6orf48Q9UBA6 75 aa13.93□□□□□ -0.18
NDUFB1-205ENST00000556555 IGLC3P0DOY3 106 aa13.92□□□□□ -0.18
NDUFB1-205ENST00000556555 NDUFA6P56556 154 aa13.92□□□□□ -0.18
NDUFB1-205ENST00000556555 RPL37AP61513 92 aaKnown RBP13.92□□□□□ -0.18
NDUFB1-205ENST00000556555 RPL18AQ02543 176 aaKnown RBP13.92□□□□□ -0.18
NDUFB1-205ENST00000556555 C10orf25Q5T742 122 aa13.92□□□□□ -0.18
NDUFB1-205ENST00000556555 C7orf33Q8WU49 177 aa13.92□□□□□ -0.18
NDUFB1-205ENST00000556555 TOMM7Q9P0U1 55 aa13.92□□□□□ -0.18
NDUFB1-205ENST00000556555 SMIM1B2RUZ4 78 aa13.91□□□□□ -0.18
NDUFB1-205ENST00000556555 C2orf82Q6UX34 121 aa13.89□□□□□ -0.19
NDUFB1-205ENST00000556555 KRTAP10-4P60372 401 aaPredicted RBP13.88□□□□□ -0.19
NDUFB1-205ENST00000556555 IFI27L1Q96BM0 104 aa13.88□□□□□ -0.19
NDUFB1-205ENST00000556555 F8VRH5 84 aa13.87□□□□□ -0.19
NDUFB1-205ENST00000556555 TRAV12-1A0A0B4J245 112 aa13.86□□□□□ -0.19
NDUFB1-205ENST00000556555 NDUFC2-KCTD14E9PQ53 114 aa13.86□□□□□ -0.19
NDUFB1-205ENST00000556555 COX7B2Q8TF08 81 aa13.86□□□□□ -0.19
NDUFB1-205ENST00000556555 SERF1AO75920 110 aa13.85□□□□□ -0.19
NDUFB1-205ENST00000556555 Q6ZRP5 223 aa13.85□□□□□ -0.19
NDUFB1-205ENST00000556555 SCO1O75880 301 aa13.84□□□□□ -0.19
NDUFB1-205ENST00000556555 SPINK8P0C7L1 97 aa13.84□□□□□ -0.19
NDUFB1-205ENST00000556555 ZNF22P17026 224 aaPredicted RBP13.84□□□□□ -0.19
NDUFB1-205ENST00000556555 FLG2Q5D862 2391 aaPredicted RBP13.83□□□□□ -0.19
NDUFB1-205ENST00000556555 FAM19A2Q8N3H0 131 aa13.83□□□□□ -0.2
NDUFB1-205ENST00000556555 CHTOPQ9Y3Y2 248 aaKnown RBP13.83□□□□□ -0.2
NDUFB1-205ENST00000556555 C9orf116Q5BN46 136 aaPredicted RBP13.82□□□□□ -0.2
NDUFB1-205ENST00000556555 IGLV5-39A0A0G2JS06 123 aa13.81□□□□□ -0.2
NDUFB1-205ENST00000556555 LEPROTL1O95214 131 aa13.81□□□□□ -0.2
NDUFB1-205ENST00000556555 LINC00310P59036 64 aa13.81□□□□□ -0.2
NDUFB1-205ENST00000556555 C11orf86A6NJI1 115 aa13.8□□□□□ -0.2
NDUFB1-205ENST00000556555 GAGE2EQ4V326 116 aa13.8□□□□□ -0.2
NDUFB1-205ENST00000556555 GAGE2DQ9UEU5 116 aa13.8□□□□□ -0.2
NDUFB1-205ENST00000556555 A0A1W2PNN7 141 aa13.79□□□□□ -0.2
NDUFB1-205ENST00000556555 TMEM170BQ5T4T1 132 aa13.79□□□□□ -0.2
NDUFB1-205ENST00000556555 HSPB8Q9UJY1 196 aa13.79□□□□□ -0.2
NDUFB1-205ENST00000556555 SFTA2Q6UW10 78 aa13.78□□□□□ -0.2
NDUFB1-205ENST00000556555 HIST1H2BKO60814 126 aa13.76□□□□□ -0.21
NDUFB1-205ENST00000556555 HIST1H2BJP06899 126 aa13.76□□□□□ -0.21
NDUFB1-205ENST00000556555 HIST1H2BOP23527 126 aa13.76□□□□□ -0.21
NDUFB1-205ENST00000556555 HIST1H2BBP33778 126 aa13.76□□□□□ -0.21
NDUFB1-205ENST00000556555 HIST1H2BDP58876 126 aa13.76□□□□□ -0.21
NDUFB1-205ENST00000556555 HIST1H2BCP62807 126 aa13.76□□□□□ -0.21
NDUFB1-205ENST00000556555 HIST2H2BEQ16778 126 aa13.76□□□□□ -0.21
NDUFB1-205ENST00000556555 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.76□□□□□ -0.21
NDUFB1-205ENST00000556555 HIST1H2BHQ93079 126 aa13.76□□□□□ -0.21
NDUFB1-205ENST00000556555 HIST1H2BNQ99877 126 aa13.76□□□□□ -0.21
NDUFB1-205ENST00000556555 HIST1H2BMQ99879 126 aa13.76□□□□□ -0.21
NDUFB1-205ENST00000556555 MYCBP2O75592 4640 aa13.76□□□□□ -0.21
NDUFB1-205ENST00000556555 S100A1P23297 94 aa13.75□□□□□ -0.21
NDUFB1-205ENST00000556555 PRR3P79522 188 aaKnown RBP13.74□□□□□ -0.21
NDUFB1-205ENST00000556555 NUPR1O60356 82 aa13.73□□□□□ -0.21
NDUFB1-205ENST00000556555 ODF1Q14990 250 aa13.73□□□□□ -0.21
NDUFB1-205ENST00000556555 DMBT1Q9UGM3 2413 aaPredicted RBP13.73□□□□□ -0.21
NDUFB1-205ENST00000556555 C9orf129Q5T035 196 aaKnown RBP13.72□□□□□ -0.21
NDUFB1-205ENST00000556555 TMEM223A0PJW6 202 aa13.71□□□□□ -0.21
NDUFB1-205ENST00000556555 FAM168BA1KXE4 195 aa13.7□□□□□ -0.22
NDUFB1-205ENST00000556555 FABP4P15090 132 aa13.7□□□□□ -0.22
NDUFB1-205ENST00000556555 PLNP26678 52 aa13.7□□□□□ -0.22
NDUFB1-205ENST00000556555 FAM19A5Q7Z5A7 132 aaPredicted RBP13.7□□□□□ -0.22
NDUFB1-205ENST00000556555 KRTAP29-1A8MX34 341 aaPredicted RBP13.68□□□□□ -0.22
NDUFB1-205ENST00000556555 H0Y8G0 127 aa13.68□□□□□ -0.22
NDUFB1-205ENST00000556555 M0QXV9 152 aa13.68□□□□□ -0.22
NDUFB1-205ENST00000556555 HNRNPA3P51991 378 aaKnown RBP13.68□□□□□ -0.22
NDUFB1-205ENST00000556555 COX17Q14061 63 aa13.68□□□□□ -0.22
NDUFB1-205ENST00000556555 PHF5AQ7RTV0 110 aaKnown RBP13.68□□□□□ -0.22
NDUFB1-205ENST00000556555 MAP1LC3CQ9BXW4 147 aa13.68□□□□□ -0.22
NDUFB1-205ENST00000556555 OXTP01178 125 aa13.67□□□□□ -0.22
NDUFB1-205ENST00000556555 XAGE1AQ9HD64 81 aa13.67□□□□□ -0.22
NDUFB1-205ENST00000556555 COA6Q5JTJ3 125 aaKnown RBP13.65□□□□□ -0.22
NDUFB1-205ENST00000556555 KRTAP7-1Q8IUC3 87 aa13.65□□□□□ -0.22
NDUFB1-205ENST00000556555 ZNF625Q96I27 306 aaPredicted RBP13.65□□□□□ -0.22
NDUFB1-205ENST00000556555 ERG28Q9UKR5 140 aa13.65□□□□□ -0.22
NDUFB1-205ENST00000556555 DPM2O94777 84 aa13.64□□□□□ -0.23
NDUFB1-205ENST00000556555 TP73-AS1Q9UF72 201 aa13.64□□□□□ -0.23
NDUFB1-205ENST00000556555 PSORS1C2Q9UIG4 136 aa13.64□□□□□ -0.23
NDUFB1-205ENST00000556555 ATP6V1G1O75348 118 aa13.63□□□□□ -0.23
NDUFB1-205ENST00000556555 LBHQ53QV2 105 aaPredicted RBP13.63□□□□□ -0.23
NDUFB1-205ENST00000556555 PLA2G2DQ9UNK4 145 aa13.63□□□□□ -0.23
NDUFB1-205ENST00000556555 J3QL48 77 aa13.62□□□□□ -0.23
NDUFB1-205ENST00000556555 PKHD1L1Q86WI1 4243 aa13.61□□□□□ -0.23
NDUFB1-205ENST00000556555 PFN2P35080 140 aa13.61□□□□□ -0.23
NDUFB1-205ENST00000556555 UBE2BP63146 152 aa13.61□□□□□ -0.23
NDUFB1-205ENST00000556555 SERTAD4-AS1Q5TG53 156 aa13.61□□□□□ -0.23
NDUFB1-205ENST00000556555 SPINK6Q6UWN8 80 aa13.61□□□□□ -0.23
NDUFB1-205ENST00000556555 IGKCP01834 107 aa13.6□□□□□ -0.23
NDUFB1-205ENST00000556555 HERVK_113P61574 105 aa13.6□□□□□ -0.23
NDUFB1-205ENST00000556555 HERV-K104P63124 156 aa13.6□□□□□ -0.23
NDUFB1-205ENST00000556555 C22orf24Q9Y442 160 aa13.59□□□□□ -0.23
NDUFB1-205ENST00000556555 LINC00587B1AMM8 73 aa13.58□□□□□ -0.24
NDUFB1-205ENST00000556555 SYS1-DBNDD2H3BUS1 97 aa13.58□□□□□ -0.24
NDUFB1-205ENST00000556555 C1orf137Q5JT78 98 aa13.58□□□□□ -0.24
NDUFB1-205ENST00000556555 PLEKHB2Q96CS7 222 aa13.58□□□□□ -0.24
NDUFB1-205ENST00000556555 IGLV5-37A0A075B6J1 123 aa13.57□□□□□ -0.24
NDUFB1-205ENST00000556555 SRSF9Q13242 221 aaKnown RBP eCLIP13.57□□□□□ -0.24
NDUFB1-205ENST00000556555 MRPL55Q7Z7F7 128 aaKnown RBP13.57□□□□□ -0.24
NDUFB1-205ENST00000556555 LEPROTO15243 131 aa13.56□□□□□ -0.24
NDUFB1-205ENST00000556555 NDUFA12Q9UI09 145 aa13.56□□□□□ -0.24
NDUFB1-205ENST00000556555 MYMXA0A1B0GTQ4 84 aa13.55□□□□□ -0.24
NDUFB1-205ENST00000556555 PET117Q6UWS5 81 aa13.55□□□□□ -0.24
NDUFB1-205ENST00000556555 PMCHL2Q9BQD1 86 aa13.55□□□□□ -0.24
NDUFB1-205ENST00000556555 SND1-IT1Q9HBX3 110 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms