RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 KMT2CQ8NEZ4 4911 aaKnown RBP4.97□□□□□ -1.61
TDP1-214ENST00000556063 C3orf79P0CE67 100 aa4.97□□□□□ -1.61
TDP1-214ENST00000556063 LINC01545Q5VT33 79 aa4.97□□□□□ -1.61
TDP1-214ENST00000556063 SFTA2Q6UW10 78 aa4.97□□□□□ -1.61
TDP1-214ENST00000556063 COX7B2Q8TF08 81 aa4.97□□□□□ -1.61
TDP1-214ENST00000556063 LINC00526Q96FQ7 95 aa4.97□□□□□ -1.61
TDP1-214ENST00000556063 HIST1H2BLQ99880 126 aa4.97□□□□□ -1.61
TDP1-214ENST00000556063 IGLV5-39A0A0G2JS06 123 aa4.96□□□□□ -1.62
TDP1-214ENST00000556063 TRBV30A0A0K0K1B3 111 aa4.96□□□□□ -1.62
TDP1-214ENST00000556063 TMEM223A0PJW6 202 aa4.96□□□□□ -1.62
TDP1-214ENST00000556063 KIAA0087Q14695 138 aa4.96□□□□□ -1.62
TDP1-214ENST00000556063 RNF151Q2KHN1 245 aa4.96□□□□□ -1.62
TDP1-214ENST00000556063 PMCHL2Q9BQD1 86 aa4.96□□□□□ -1.62
TDP1-214ENST00000556063 SLPIP03973 132 aa4.95□□□□□ -1.62
TDP1-214ENST00000556063 FUSP35637 526 aaKnown RBP eCLIP4.95□□□□□ -1.62
TDP1-214ENST00000556063 Q6ZRU5 148 aa4.95□□□□□ -1.62
TDP1-214ENST00000556063 PLEKHB2Q96CS7 222 aa4.95□□□□□ -1.62
TDP1-214ENST00000556063 LOC107984640A0A0U1RRK4 108 aa4.94□□□□□ -1.62
TDP1-214ENST00000556063 UNQ6190/PRO20217Q6UXQ8 127 aa4.94□□□□□ -1.62
TDP1-214ENST00000556063 LINC00474Q9P2X8 69 aa4.94□□□□□ -1.62
TDP1-214ENST00000556063 SACSQ9NZJ4 4579 aa4.94□□□□□ -1.62
TDP1-214ENST00000556063 LEPROTO15243 131 aa4.93□□□□□ -1.62
TDP1-214ENST00000556063 KRTAP10-1P60331 282 aa4.93□□□□□ -1.62
TDP1-214ENST00000556063 LINC01620Q4KN68 170 aa4.93□□□□□ -1.62
TDP1-214ENST00000556063 C2orf82Q6UX34 121 aa4.93□□□□□ -1.62
TDP1-214ENST00000556063 SDIM1Q6ZPB5 146 aa4.93□□□□□ -1.62
TDP1-214ENST00000556063 DPH3Q96FX2 82 aa4.93□□□□□ -1.62
TDP1-214ENST00000556063 C6orf48Q9UBA6 75 aa4.93□□□□□ -1.62
TDP1-214ENST00000556063 RYR3Q15413 4870 aa4.93□□□□□ -1.62
TDP1-214ENST00000556063 RYR2Q92736 4967 aa4.93□□□□□ -1.62
TDP1-214ENST00000556063 MYMXA0A1B0GTQ4 84 aa4.92□□□□□ -1.62
TDP1-214ENST00000556063 LINC00587B1AMM8 73 aa4.92□□□□□ -1.62
TDP1-214ENST00000556063 HSBP1L1C9JCN9 74 aa4.92□□□□□ -1.62
TDP1-214ENST00000556063 E9PLD3 99 aa4.92□□□□□ -1.62
TDP1-214ENST00000556063 SCGB1D1O95968 90 aa4.92□□□□□ -1.62
TDP1-214ENST00000556063 LGALS3P17931 250 aaKnown RBP4.92□□□□□ -1.62
TDP1-214ENST00000556063 HERV-K104P63124 156 aa4.92□□□□□ -1.62
TDP1-214ENST00000556063 C10orf25Q5T742 122 aa4.92□□□□□ -1.62
TDP1-214ENST00000556063 LINC00528Q8N1L1 170 aa4.92□□□□□ -1.62
TDP1-214ENST00000556063 NDUFC2-KCTD14E9PQ53 114 aa4.91□□□□□ -1.62
TDP1-214ENST00000556063 J3QQQ9 107 aa4.91□□□□□ -1.62
TDP1-214ENST00000556063 TLX1NBP0CAT3 122 aa4.91□□□□□ -1.62
TDP1-214ENST00000556063 NMUP48645 174 aa4.91□□□□□ -1.62
TDP1-214ENST00000556063 RPL18AQ02543 176 aaKnown RBP4.91□□□□□ -1.62
TDP1-214ENST00000556063 GAGE2BQ13066 116 aa4.91□□□□□ -1.62
TDP1-214ENST00000556063 NDUFA12Q9UI09 145 aa4.91□□□□□ -1.62
TDP1-214ENST00000556063 IGKV2-24A0A0C4DH68 120 aa4.9□□□□□ -1.63
TDP1-214ENST00000556063 CDK2AP2O75956 126 aa4.9□□□□□ -1.63
TDP1-214ENST00000556063 PTTG1IPP53801 180 aa4.9□□□□□ -1.63
TDP1-214ENST00000556063 COX17Q14061 63 aa4.9□□□□□ -1.63
TDP1-214ENST00000556063 STPG4Q8N801 248 aa4.9□□□□□ -1.63
TDP1-214ENST00000556063 HYDINQ4G0P3 5121 aa4.9□□□□□ -1.63
TDP1-214ENST00000556063 A0A096LNI7 61 aa4.89□□□□□ -1.63
TDP1-214ENST00000556063 CIRBPQ14011 172 aaKnown RBP4.89□□□□□ -1.63
TDP1-214ENST00000556063 MAJINQ3KP22 176 aa4.89□□□□□ -1.63
TDP1-214ENST00000556063 GAGE2EQ4V326 116 aa4.89□□□□□ -1.63
TDP1-214ENST00000556063 C9orf116Q5BN46 136 aaPredicted RBP4.89□□□□□ -1.63
TDP1-214ENST00000556063 MEIG1Q5JSS6 88 aa4.89□□□□□ -1.63
TDP1-214ENST00000556063 Q6ZSA8 131 aa4.89□□□□□ -1.63
TDP1-214ENST00000556063 ATOH7Q8N100 152 aa4.89□□□□□ -1.63
TDP1-214ENST00000556063 ZNF625Q96I27 306 aaPredicted RBP4.89□□□□□ -1.63
TDP1-214ENST00000556063 GAGE2DQ9UEU5 116 aa4.89□□□□□ -1.63
TDP1-214ENST00000556063 ERG28Q9UKR5 140 aa4.89□□□□□ -1.63
TDP1-214ENST00000556063 CHTF8P0CG12 524 aa4.88□□□□□ -1.63
TDP1-214ENST00000556063 PFN2P35080 140 aa4.88□□□□□ -1.63
TDP1-214ENST00000556063 LINC00158P58513 81 aa4.88□□□□□ -1.63
TDP1-214ENST00000556063 JOSD1Q15040 202 aaPredicted RBP4.88□□□□□ -1.63
TDP1-214ENST00000556063 LCE1DQ5T752 114 aa4.88□□□□□ -1.63
TDP1-214ENST00000556063 SPACA4Q8TDM5 124 aa4.88□□□□□ -1.63
TDP1-214ENST00000556063 FAM30AQ9NZY2 134 aa4.88□□□□□ -1.63
TDP1-214ENST00000556063 A0A087WYN8 130 aa4.87□□□□□ -1.63
TDP1-214ENST00000556063 ZNF815PA8K554 130 aa4.87□□□□□ -1.63
TDP1-214ENST00000556063 TSPEAR-AS2P59090 65 aa4.87□□□□□ -1.63
TDP1-214ENST00000556063 Q6ZRP5 223 aa4.87□□□□□ -1.63
TDP1-214ENST00000556063 KRTAP19-1Q8IUB9 90 aa4.87□□□□□ -1.63
TDP1-214ENST00000556063 KRTAP4-2Q9BYR5 136 aa4.87□□□□□ -1.63
TDP1-214ENST00000556063 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.87□□□□□ -1.63
TDP1-214ENST00000556063 ANKRD39Q53RE8 183 aa4.86□□□□□ -1.63
TDP1-214ENST00000556063 SCXQ7RTU7 201 aa4.86□□□□□ -1.63
TDP1-214ENST00000556063 IGKV2D-26A0A0A0MRZ7 120 aa4.85□□□□□ -1.63
TDP1-214ENST00000556063 A0A0U1RRA0 63 aa4.85□□□□□ -1.63
TDP1-214ENST00000556063 SMIM13P0DJ93 91 aa4.85□□□□□ -1.63
TDP1-214ENST00000556063 XGP55808 180 aa4.85□□□□□ -1.63
TDP1-214ENST00000556063 SCGB1D4Q6XE38 83 aa4.85□□□□□ -1.63
TDP1-214ENST00000556063 CIRBP-AS1Q8TBR5 109 aa4.85□□□□□ -1.63
TDP1-214ENST00000556063 VAMP8Q9BV40 100 aa4.85□□□□□ -1.63
TDP1-214ENST00000556063 XAGE1AQ9HD64 81 aa4.85□□□□□ -1.63
TDP1-214ENST00000556063 PLAC8Q9NZF1 115 aa4.85□□□□□ -1.63
TDP1-214ENST00000556063 DNAH10Q8IVF4 4471 aa4.84□□□□□ -1.63
TDP1-214ENST00000556063 A0A0J9YXY3 114 aa4.84□□□□□ -1.63
TDP1-214ENST00000556063 PANO1I0J062 215 aa4.84□□□□□ -1.63
TDP1-214ENST00000556063 TIMM17BO60830 172 aa4.84□□□□□ -1.63
TDP1-214ENST00000556063 RPL24P83731 157 aaKnown RBP4.84□□□□□ -1.63
TDP1-214ENST00000556063 C7orf33Q8WU49 177 aa4.84□□□□□ -1.63
TDP1-214ENST00000556063 MIEN1Q9BRT3 115 aa4.84□□□□□ -1.63
TDP1-214ENST00000556063 SND1-IT1Q9HBX3 110 aa4.84□□□□□ -1.63
TDP1-214ENST00000556063 DNAH17Q9UFH2 4485 aa4.84□□□□□ -1.63
TDP1-214ENST00000556063 TMEM238C9JI98 176 aa4.83□□□□□ -1.64
TDP1-214ENST00000556063 S100A12P80511 92 aa4.83□□□□□ -1.64
TDP1-214ENST00000556063 LBHQ53QV2 105 aaPredicted RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms