RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 KIAA0087Q14695 138 aa7.65□□□□□ -1.18
SRP54-206ENST00000555317 C10orf25Q5T742 122 aa7.65□□□□□ -1.18
SRP54-206ENST00000555317 Q8IZM0 81 aa7.65□□□□□ -1.18
SRP54-206ENST00000555317 URB1-AS1Q96HZ7 61 aa7.65□□□□□ -1.18
SRP54-206ENST00000555317 C6orf48Q9UBA6 75 aa7.65□□□□□ -1.18
SRP54-206ENST00000555317 A0A096LNJ9 63 aa7.64□□□□□ -1.19
SRP54-206ENST00000555317 TRGC2P03986 189 aa7.64□□□□□ -1.19
SRP54-206ENST00000555317 LCE2AQ5TA79 106 aaPredicted RBP7.64□□□□□ -1.19
SRP54-206ENST00000555317 C2orf82Q6UX34 121 aa7.64□□□□□ -1.19
SRP54-206ENST00000555317 MYCBP2O75592 4640 aa7.63□□□□□ -1.19
SRP54-206ENST00000555317 HSBP1O75506 76 aa7.63□□□□□ -1.19
SRP54-206ENST00000555317 CXCL5P42830 114 aa7.63□□□□□ -1.19
SRP54-206ENST00000555317 GAGE2EQ4V326 116 aa7.63□□□□□ -1.19
SRP54-206ENST00000555317 PDZD11Q5EBL8 140 aa7.63□□□□□ -1.19
SRP54-206ENST00000555317 GAGE2DQ9UEU5 116 aa7.63□□□□□ -1.19
SRP54-206ENST00000555317 IGLV5-45A0A087WSX0 123 aa7.62□□□□□ -1.19
SRP54-206ENST00000555317 SMIM1B2RUZ4 78 aa7.62□□□□□ -1.19
SRP54-206ENST00000555317 SPINK8P0C7L1 97 aa7.62□□□□□ -1.19
SRP54-206ENST00000555317 TLX1NBP0CAT3 122 aa7.62□□□□□ -1.19
SRP54-206ENST00000555317 COX7B2Q8TF08 81 aa7.62□□□□□ -1.19
SRP54-206ENST00000555317 NDUFC2-KCTD14E9PQ53 114 aa7.61□□□□□ -1.19
SRP54-206ENST00000555317 F8VRH5 84 aa7.61□□□□□ -1.19
SRP54-206ENST00000555317 IGLC3P0DOY3 106 aa7.61□□□□□ -1.19
SRP54-206ENST00000555317 C9orf116Q5BN46 136 aaPredicted RBP7.61□□□□□ -1.19
SRP54-206ENST00000555317 J3QL48 77 aa7.6□□□□□ -1.19
SRP54-206ENST00000555317 KRTAP10-4P60372 401 aaPredicted RBP7.6□□□□□ -1.19
SRP54-206ENST00000555317 Q6ZRP5 223 aa7.6□□□□□ -1.19
SRP54-206ENST00000555317 IFI27L1Q96BM0 104 aa7.6□□□□□ -1.19
SRP54-206ENST00000555317 COLCA2A8K830 154 aa7.59□□□□□ -1.19
SRP54-206ENST00000555317 TMEM170BQ5T4T1 132 aa7.59□□□□□ -1.19
SRP54-206ENST00000555317 CHTOPQ9Y3Y2 248 aaKnown RBP7.59□□□□□ -1.19
SRP54-206ENST00000555317 A0A1W2PNN7 141 aa7.58□□□□□ -1.2
SRP54-206ENST00000555317 PRR3P79522 188 aaKnown RBP7.58□□□□□ -1.2
SRP54-206ENST00000555317 FAM19A5Q7Z5A7 132 aaPredicted RBP7.58□□□□□ -1.2
SRP54-206ENST00000555317 FAM19A2Q8N3H0 131 aa7.58□□□□□ -1.2
SRP54-206ENST00000555317 TRAV12-1A0A0B4J245 112 aa7.57□□□□□ -1.2
SRP54-206ENST00000555317 SERF1AO75920 110 aa7.57□□□□□ -1.2
SRP54-206ENST00000555317 ZNF22P17026 224 aaPredicted RBP7.57□□□□□ -1.2
SRP54-206ENST00000555317 C11orf86A6NJI1 115 aa7.56□□□□□ -1.2
SRP54-206ENST00000555317 H0Y8G0 127 aa7.56□□□□□ -1.2
SRP54-206ENST00000555317 SCO1O75880 301 aa7.56□□□□□ -1.2
SRP54-206ENST00000555317 LEPROTL1O95214 131 aa7.56□□□□□ -1.2
SRP54-206ENST00000555317 SMCPP49901 116 aaPredicted RBP7.56□□□□□ -1.2
SRP54-206ENST00000555317 PKHD1L1Q86WI1 4243 aa7.55□□□□□ -1.2
SRP54-206ENST00000555317 FAM168BA1KXE4 195 aa7.55□□□□□ -1.2
SRP54-206ENST00000555317 PHF5AQ7RTV0 110 aaKnown RBP7.55□□□□□ -1.2
SRP54-206ENST00000555317 HSPB8Q9UJY1 196 aa7.55□□□□□ -1.2
SRP54-206ENST00000555317 IGLV5-39A0A0G2JS06 123 aa7.54□□□□□ -1.2
SRP54-206ENST00000555317 M0QXV9 152 aa7.54□□□□□ -1.2
SRP54-206ENST00000555317 HNRNPA3P51991 378 aaKnown RBP7.54□□□□□ -1.2
SRP54-206ENST00000555317 UBE2BP63146 152 aa7.54□□□□□ -1.2
SRP54-206ENST00000555317 SFTA2Q6UW10 78 aa7.54□□□□□ -1.2
SRP54-206ENST00000555317 KRTAP29-1A8MX34 341 aaPredicted RBP7.53□□□□□ -1.2
SRP54-206ENST00000555317 OXTP01178 125 aa7.53□□□□□ -1.2
SRP54-206ENST00000555317 C9orf129Q5T035 196 aaKnown RBP7.53□□□□□ -1.2
SRP54-206ENST00000555317 XAGE1AQ9HD64 81 aa7.53□□□□□ -1.2
SRP54-206ENST00000555317 FABP4P15090 132 aa7.52□□□□□ -1.21
SRP54-206ENST00000555317 LINC00310P59036 64 aa7.51□□□□□ -1.21
SRP54-206ENST00000555317 C1orf137Q5JT78 98 aa7.51□□□□□ -1.21
SRP54-206ENST00000555317 PSORS1C2Q9UIG4 136 aa7.51□□□□□ -1.21
SRP54-206ENST00000555317 PLNP26678 52 aa7.5□□□□□ -1.21
SRP54-206ENST00000555317 PFN2P35080 140 aa7.5□□□□□ -1.21
SRP54-206ENST00000555317 LBHQ53QV2 105 aaPredicted RBP7.5□□□□□ -1.21
SRP54-206ENST00000555317 ERG28Q9UKR5 140 aa7.5□□□□□ -1.21
SRP54-206ENST00000555317 TMEM223A0PJW6 202 aa7.49□□□□□ -1.21
SRP54-206ENST00000555317 HIST1H2BKO60814 126 aa7.49□□□□□ -1.21
SRP54-206ENST00000555317 HIST1H2BJP06899 126 aa7.49□□□□□ -1.21
SRP54-206ENST00000555317 HIST1H2BOP23527 126 aa7.49□□□□□ -1.21
SRP54-206ENST00000555317 HIST1H2BBP33778 126 aa7.49□□□□□ -1.21
SRP54-206ENST00000555317 HIST1H2BDP58876 126 aa7.49□□□□□ -1.21
SRP54-206ENST00000555317 HIST1H2BCP62807 126 aa7.49□□□□□ -1.21
SRP54-206ENST00000555317 ODF1Q14990 250 aa7.49□□□□□ -1.21
SRP54-206ENST00000555317 HIST2H2BEQ16778 126 aa7.49□□□□□ -1.21
SRP54-206ENST00000555317 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.49□□□□□ -1.21
SRP54-206ENST00000555317 SPINK6Q6UWN8 80 aa7.49□□□□□ -1.21
SRP54-206ENST00000555317 HIST1H2BHQ93079 126 aa7.49□□□□□ -1.21
SRP54-206ENST00000555317 HIST1H2BNQ99877 126 aa7.49□□□□□ -1.21
SRP54-206ENST00000555317 HIST1H2BMQ99879 126 aa7.49□□□□□ -1.21
SRP54-206ENST00000555317 MAP1LC3CQ9BXW4 147 aa7.49□□□□□ -1.21
SRP54-206ENST00000555317 HERC1Q15751 4861 aa7.49□□□□□ -1.21
SRP54-206ENST00000555317 NUPR1O60356 82 aa7.48□□□□□ -1.21
SRP54-206ENST00000555317 COX17Q14061 63 aa7.48□□□□□ -1.21
SRP54-206ENST00000555317 LCE2CQ5TA81 110 aa7.48□□□□□ -1.21
SRP54-206ENST00000555317 SERTAD4-AS1Q5TG53 156 aa7.48□□□□□ -1.21
SRP54-206ENST00000555317 REG3GQ6UW15 175 aa7.48□□□□□ -1.21
SRP54-206ENST00000555317 NKAPP1Q8N9T2 125 aa7.48□□□□□ -1.21
SRP54-206ENST00000555317 ZNF625Q96I27 306 aaPredicted RBP7.48□□□□□ -1.21
SRP54-206ENST00000555317 ATP6V1G1O75348 118 aa7.47□□□□□ -1.21
SRP54-206ENST00000555317 DPM2O94777 84 aa7.47□□□□□ -1.21
SRP54-206ENST00000555317 HERVK_113P61574 105 aa7.47□□□□□ -1.21
SRP54-206ENST00000555317 C22orf24Q9Y442 160 aa7.47□□□□□ -1.21
SRP54-206ENST00000555317 LRP1Q07954 4544 aaKnown RBP7.47□□□□□ -1.21
SRP54-206ENST00000555317 S100A1P23297 94 aa7.46□□□□□ -1.22
SRP54-206ENST00000555317 MRPL55Q7Z7F7 128 aaKnown RBP7.46□□□□□ -1.22
SRP54-206ENST00000555317 KRTAP7-1Q8IUC3 87 aa7.46□□□□□ -1.22
SRP54-206ENST00000555317 TP73-AS1Q9UF72 201 aa7.46□□□□□ -1.22
SRP54-206ENST00000555317 IGKCP01834 107 aa7.45□□□□□ -1.22
SRP54-206ENST00000555317 LINC00158P58513 81 aa7.45□□□□□ -1.22
SRP54-206ENST00000555317 MEIG1Q5JSS6 88 aa7.45□□□□□ -1.22
SRP54-206ENST00000555317 PLA2G2DQ9UNK4 145 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms