RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 PKIGQ9Y2B9 76 aa9.24□□□□□ -0.93
CHD8-208ENST00000555301 DNAH5Q8TE73 4624 aa9.23□□□□□ -0.93
CHD8-208ENST00000555301 RNF151Q2KHN1 245 aa9.23□□□□□ -0.93
CHD8-208ENST00000555301 TMA7Q9Y2S6 64 aaKnown RBP9.23□□□□□ -0.93
CHD8-208ENST00000555301 KRTAP10-1P60331 282 aa9.22□□□□□ -0.93
CHD8-208ENST00000555301 HERVK_113P61574 105 aa9.22□□□□□ -0.93
CHD8-208ENST00000555301 LINC01620Q4KN68 170 aa9.22□□□□□ -0.93
CHD8-208ENST00000555301 UNQ6190/PRO20217Q6UXQ8 127 aa9.22□□□□□ -0.93
CHD8-208ENST00000555301 TRBV30A0A0K0K1B3 111 aa9.21□□□□□ -0.94
CHD8-208ENST00000555301 SFTA2Q6UW10 78 aa9.21□□□□□ -0.94
CHD8-208ENST00000555301 C2orf82Q6UX34 121 aa9.21□□□□□ -0.94
CHD8-208ENST00000555301 SDIM1Q6ZPB5 146 aa9.21□□□□□ -0.94
CHD8-208ENST00000555301 PKHD1P08F94 4074 aa9.2□□□□□ -0.94
CHD8-208ENST00000555301 C10orf25Q5T742 122 aa9.2□□□□□ -0.94
CHD8-208ENST00000555301 C6orf48Q9UBA6 75 aa9.2□□□□□ -0.94
CHD8-208ENST00000555301 DYNC1H1Q14204 4646 aaKnown RBP9.19□□□□□ -0.94
CHD8-208ENST00000555301 LOC107984640A0A0U1RRK4 108 aa9.18□□□□□ -0.94
CHD8-208ENST00000555301 PLEKHB2Q96CS7 222 aa9.18□□□□□ -0.94
CHD8-208ENST00000555301 LRP1BQ9NZR2 4599 aa9.17□□□□□ -0.94
CHD8-208ENST00000555301 LEPROTO15243 131 aa9.17□□□□□ -0.94
CHD8-208ENST00000555301 TLX1NBP0CAT3 122 aa9.17□□□□□ -0.94
CHD8-208ENST00000555301 E9PLD3 99 aa9.16□□□□□ -0.94
CHD8-208ENST00000555301 Q6ZSA8 131 aa9.16□□□□□ -0.94
CHD8-208ENST00000555301 LINC00474Q9P2X8 69 aa9.16□□□□□ -0.94
CHD8-208ENST00000555301 NDUFC2-KCTD14E9PQ53 114 aa9.15□□□□□ -0.94
CHD8-208ENST00000555301 J3QQQ9 107 aa9.15□□□□□ -0.94
CHD8-208ENST00000555301 STPG4Q8N801 248 aa9.15□□□□□ -0.94
CHD8-208ENST00000555301 ZNF625Q96I27 306 aaPredicted RBP9.15□□□□□ -0.94
CHD8-208ENST00000555301 SCGB1D1O95968 90 aa9.14□□□□□ -0.95
CHD8-208ENST00000555301 LGALS3P17931 250 aaKnown RBP9.14□□□□□ -0.95
CHD8-208ENST00000555301 RPL18AQ02543 176 aaKnown RBP9.14□□□□□ -0.95
CHD8-208ENST00000555301 C9orf116Q5BN46 136 aaPredicted RBP9.14□□□□□ -0.95
CHD8-208ENST00000555301 ATOH7Q8N100 152 aa9.14□□□□□ -0.95
CHD8-208ENST00000555301 FAM30AQ9NZY2 134 aa9.14□□□□□ -0.95
CHD8-208ENST00000555301 NDUFA12Q9UI09 145 aa9.14□□□□□ -0.95
CHD8-208ENST00000555301 A0A096LNI7 61 aa9.13□□□□□ -0.95
CHD8-208ENST00000555301 IGKV2-24A0A0C4DH68 120 aa9.13□□□□□ -0.95
CHD8-208ENST00000555301 MYMXA0A1B0GTQ4 84 aa9.13□□□□□ -0.95
CHD8-208ENST00000555301 CDK2AP2O75956 126 aa9.13□□□□□ -0.95
CHD8-208ENST00000555301 NMUP48645 174 aa9.13□□□□□ -0.95
CHD8-208ENST00000555301 PTTG1IPP53801 180 aa9.13□□□□□ -0.95
CHD8-208ENST00000555301 HERV-K104P63124 156 aa9.13□□□□□ -0.95
CHD8-208ENST00000555301 GAGE2BQ13066 116 aa9.13□□□□□ -0.95
CHD8-208ENST00000555301 CIRBPQ14011 172 aaKnown RBP9.13□□□□□ -0.95
CHD8-208ENST00000555301 TSPEAR-AS2P59090 65 aa9.12□□□□□ -0.95
CHD8-208ENST00000555301 Q6ZRP5 223 aa9.12□□□□□ -0.95
CHD8-208ENST00000555301 SPACA4Q8TDM5 124 aa9.12□□□□□ -0.95
CHD8-208ENST00000555301 DPH3Q96FX2 82 aa9.12□□□□□ -0.95
CHD8-208ENST00000555301 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.12□□□□□ -0.95
CHD8-208ENST00000555301 BIRC6Q9NR09 4857 aa9.12□□□□□ -0.95
CHD8-208ENST00000555301 LINC00587B1AMM8 73 aa9.11□□□□□ -0.95
CHD8-208ENST00000555301 HSBP1L1C9JCN9 74 aa9.11□□□□□ -0.95
CHD8-208ENST00000555301 CHTF8P0CG12 524 aa9.11□□□□□ -0.95
CHD8-208ENST00000555301 COX17Q14061 63 aa9.11□□□□□ -0.95
CHD8-208ENST00000555301 MAJINQ3KP22 176 aa9.11□□□□□ -0.95
CHD8-208ENST00000555301 ERG28Q9UKR5 140 aa9.11□□□□□ -0.95
CHD8-208ENST00000555301 PANO1I0J062 215 aa9.1□□□□□ -0.95
CHD8-208ENST00000555301 GAGE2EQ4V326 116 aa9.1□□□□□ -0.95
CHD8-208ENST00000555301 GAGE2DQ9UEU5 116 aa9.1□□□□□ -0.95
CHD8-208ENST00000555301 PFN2P35080 140 aa9.09□□□□□ -0.95
CHD8-208ENST00000555301 XGP55808 180 aa9.09□□□□□ -0.95
CHD8-208ENST00000555301 JOSD1Q15040 202 aaPredicted RBP9.09□□□□□ -0.95
CHD8-208ENST00000555301 DNAH8Q96JB1 4490 aa9.08□□□□□ -0.96
CHD8-208ENST00000555301 IGKV2D-26A0A0A0MRZ7 120 aa9.08□□□□□ -0.96
CHD8-208ENST00000555301 ANKRD39Q53RE8 183 aa9.08□□□□□ -0.96
CHD8-208ENST00000555301 MEIG1Q5JSS6 88 aa9.08□□□□□ -0.96
CHD8-208ENST00000555301 SCXQ7RTU7 201 aa9.08□□□□□ -0.96
CHD8-208ENST00000555301 CIRBP-AS1Q8TBR5 109 aa9.08□□□□□ -0.96
CHD8-208ENST00000555301 A0A087WYN8 130 aa9.07□□□□□ -0.96
CHD8-208ENST00000555301 LINC00158P58513 81 aa9.06□□□□□ -0.96
CHD8-208ENST00000555301 PLAC8Q9NZF1 115 aa9.06□□□□□ -0.96
CHD8-208ENST00000555301 APOBP04114 4563 aaKnown RBP9.05□□□□□ -0.96
CHD8-208ENST00000555301 ZNF815PA8K554 130 aa9.05□□□□□ -0.96
CHD8-208ENST00000555301 SMIM13P0DJ93 91 aa9.05□□□□□ -0.96
CHD8-208ENST00000555301 HAMPP81172 84 aa9.05□□□□□ -0.96
CHD8-208ENST00000555301 XAGE1AQ9HD64 81 aa9.05□□□□□ -0.96
CHD8-208ENST00000555301 C9orf129Q5T035 196 aaKnown RBP9.04□□□□□ -0.96
CHD8-208ENST00000555301 A0A0J9YXY3 114 aa9.03□□□□□ -0.96
CHD8-208ENST00000555301 A0A0U1RRA0 63 aa9.03□□□□□ -0.96
CHD8-208ENST00000555301 A0A1W2PNN7 141 aa9.02□□□□□ -0.97
CHD8-208ENST00000555301 PYY3Q5JQD4 70 aa9.02□□□□□ -0.97
CHD8-208ENST00000555301 TTTY13Q9BZ97 58 aa9.02□□□□□ -0.97
CHD8-208ENST00000555301 SND1-IT1Q9HBX3 110 aa9.02□□□□□ -0.97
CHD8-208ENST00000555301 EPM2AB3EWF7 344 aa9.01□□□□□ -0.97
CHD8-208ENST00000555301 MIR7-3HGQ8N6C7 128 aa9.01□□□□□ -0.97
CHD8-208ENST00000555301 KIAA1109Q2LD37 5005 aa9.01□□□□□ -0.97
CHD8-208ENST00000555301 RYR1P21817 5038 aa9□□□□□ -0.97
CHD8-208ENST00000555301 FAM168BA1KXE4 195 aa9□□□□□ -0.97
CHD8-208ENST00000555301 TIMM17BO60830 172 aa9□□□□□ -0.97
CHD8-208ENST00000555301 SCGB1D4Q6XE38 83 aa9□□□□□ -0.97
CHD8-208ENST00000555301 FAM19A5Q7Z5A7 132 aaPredicted RBP9□□□□□ -0.97
CHD8-208ENST00000555301 PCP2Q8IVA1 136 aa9□□□□□ -0.97
CHD8-208ENST00000555301 VAMP8Q9BV40 100 aa9□□□□□ -0.97
CHD8-208ENST00000555301 PLA2G2DQ9UNK4 145 aa9□□□□□ -0.97
CHD8-208ENST00000555301 SMR3BP02814 79 aaPredicted RBP8.98□□□□□ -0.97
CHD8-208ENST00000555301 RPL24P83731 157 aaKnown RBP8.98□□□□□ -0.97
CHD8-208ENST00000555301 C7orf33Q8WU49 177 aa8.98□□□□□ -0.97
CHD8-208ENST00000555301 PAM16Q9Y3D7 125 aa8.98□□□□□ -0.97
CHD8-208ENST00000555301 TMEM238C9JI98 176 aa8.97□□□□□ -0.97
CHD8-208ENST00000555301 M0QXV9 152 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms