RNA–Protein interactions for RNA: ENST00000554232.5

UBR7-204, Transcript of ubiquitin protein ligase E3 component n-recognin 7 (putative), humanhuman

TSL 4

Gene UBR7, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR7-204ENST00000554232 PLAC8Q9NZF1 115 aa13.25□□□□□ -0.29
UBR7-204ENST00000554232 C6orf48Q9UBA6 75 aa13.25□□□□□ -0.29
UBR7-204ENST00000554232 S100A1P23297 94 aa13.24□□□□□ -0.29
UBR7-204ENST00000554232 CXCL5P42830 114 aa13.24□□□□□ -0.29
UBR7-204ENST00000554232 LINC00310P59036 64 aa13.24□□□□□ -0.29
UBR7-204ENST00000554232 C2orf82Q6UX34 121 aa13.24□□□□□ -0.29
UBR7-204ENST00000554232 STPG4Q8N801 248 aa13.24□□□□□ -0.29
UBR7-204ENST00000554232 SPINK8P0C7L1 97 aa13.23□□□□□ -0.29
UBR7-204ENST00000554232 CHTOPQ9Y3Y2 248 aaKnown RBP13.23□□□□□ -0.29
UBR7-204ENST00000554232 TRAV12-1A0A0B4J245 112 aa13.22□□□□□ -0.29
UBR7-204ENST00000554232 LEPROTL1O95214 131 aa13.22□□□□□ -0.29
UBR7-204ENST00000554232 TLX1NBP0CAT3 122 aa13.22□□□□□ -0.29
UBR7-204ENST00000554232 COX7B2Q8TF08 81 aa13.22□□□□□ -0.29
UBR7-204ENST00000554232 ZNF22P17026 224 aaPredicted RBP13.21□□□□□ -0.29
UBR7-204ENST00000554232 HIST1H2BKO60814 126 aa13.2□□□□□ -0.3
UBR7-204ENST00000554232 ATP6V1G1O75348 118 aa13.2□□□□□ -0.3
UBR7-204ENST00000554232 HIST1H2BJP06899 126 aa13.2□□□□□ -0.3
UBR7-204ENST00000554232 HIST1H2BOP23527 126 aa13.2□□□□□ -0.3
UBR7-204ENST00000554232 HIST1H2BBP33778 126 aa13.2□□□□□ -0.3
UBR7-204ENST00000554232 HIST1H2BDP58876 126 aa13.2□□□□□ -0.3
UBR7-204ENST00000554232 HIST1H2BCP62807 126 aa13.2□□□□□ -0.3
UBR7-204ENST00000554232 HIST2H2BEQ16778 126 aa13.2□□□□□ -0.3
UBR7-204ENST00000554232 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.2□□□□□ -0.3
UBR7-204ENST00000554232 HIST1H2BHQ93079 126 aa13.2□□□□□ -0.3
UBR7-204ENST00000554232 HIST1H2BNQ99877 126 aa13.2□□□□□ -0.3
UBR7-204ENST00000554232 HIST1H2BMQ99879 126 aa13.2□□□□□ -0.3
UBR7-204ENST00000554232 VPS13BQ7Z7G8 4022 aa13.2□□□□□ -0.3
UBR7-204ENST00000554232 C11orf86A6NJI1 115 aa13.19□□□□□ -0.3
UBR7-204ENST00000554232 F8VRH5 84 aa13.19□□□□□ -0.3
UBR7-204ENST00000554232 HSPB8Q9UJY1 196 aa13.19□□□□□ -0.3
UBR7-204ENST00000554232 RPL37AP61513 92 aaKnown RBP13.18□□□□□ -0.3
UBR7-204ENST00000554232 TMEM170BQ5T4T1 132 aa13.18□□□□□ -0.3
UBR7-204ENST00000554232 C7orf33Q8WU49 177 aa13.18□□□□□ -0.3
UBR7-204ENST00000554232 FAT1Q14517 4588 aa13.18□□□□□ -0.3
UBR7-204ENST00000554232 ABCA13Q86UQ4 5058 aa13.17□□□□□ -0.3
UBR7-204ENST00000554232 PCLOQ9Y6V0 5065 aa13.17□□□□□ -0.3
UBR7-204ENST00000554232 NUPR1O60356 82 aa13.17□□□□□ -0.3
UBR7-204ENST00000554232 INAFM2P0DMQ5 153 aa13.17□□□□□ -0.3
UBR7-204ENST00000554232 Q6ZRP5 223 aa13.17□□□□□ -0.3
UBR7-204ENST00000554232 NDUFC2-KCTD14E9PQ53 114 aa13.16□□□□□ -0.3
UBR7-204ENST00000554232 H0Y8G0 127 aa13.16□□□□□ -0.3
UBR7-204ENST00000554232 IGLV5-39A0A0G2JS06 123 aa13.15□□□□□ -0.3
UBR7-204ENST00000554232 C9orf116Q5BN46 136 aaPredicted RBP13.15□□□□□ -0.3
UBR7-204ENST00000554232 FABP4P15090 132 aa13.14□□□□□ -0.31
UBR7-204ENST00000554232 GAGE2EQ4V326 116 aa13.14□□□□□ -0.31
UBR7-204ENST00000554232 GAGE2DQ9UEU5 116 aa13.14□□□□□ -0.31
UBR7-204ENST00000554232 ODF1Q14990 250 aa13.12□□□□□ -0.31
UBR7-204ENST00000554232 KRTAP10-4P60372 401 aaPredicted RBP13.11□□□□□ -0.31
UBR7-204ENST00000554232 A0A1W2PNN7 141 aa13.1□□□□□ -0.31
UBR7-204ENST00000554232 TMEM223A0PJW6 202 aa13.09□□□□□ -0.31
UBR7-204ENST00000554232 SFTA2Q6UW10 78 aa13.09□□□□□ -0.31
UBR7-204ENST00000554232 MAP1LC3CQ9BXW4 147 aa13.09□□□□□ -0.31
UBR7-204ENST00000554232 PLNP26678 52 aa13.08□□□□□ -0.32
UBR7-204ENST00000554232 COA6Q5JTJ3 125 aaKnown RBP13.06□□□□□ -0.32
UBR7-204ENST00000554232 FAM19A5Q7Z5A7 132 aaPredicted RBP13.06□□□□□ -0.32
UBR7-204ENST00000554232 SRRM2Q9UQ35 2752 aaKnown RBP13.05□□□□□ -0.32
UBR7-204ENST00000554232 FAM168BA1KXE4 195 aa13.05□□□□□ -0.32
UBR7-204ENST00000554232 C9orf129Q5T035 196 aaKnown RBP13.05□□□□□ -0.32
UBR7-204ENST00000554232 DPM2O94777 84 aa13.04□□□□□ -0.32
UBR7-204ENST00000554232 PRR3P79522 188 aaKnown RBP13.03□□□□□ -0.32
UBR7-204ENST00000554232 IGKCP01834 107 aa13.02□□□□□ -0.33
UBR7-204ENST00000554232 PHF5AQ7RTV0 110 aaKnown RBP13.02□□□□□ -0.33
UBR7-204ENST00000554232 XAGE1AQ9HD64 81 aa13.02□□□□□ -0.33
UBR7-204ENST00000554232 M0QXV9 152 aa13.01□□□□□ -0.33
UBR7-204ENST00000554232 ZNF625Q96I27 306 aaPredicted RBP13.01□□□□□ -0.33
UBR7-204ENST00000554232 PMCHL2Q9BQD1 86 aa13.01□□□□□ -0.33
UBR7-204ENST00000554232 ERG28Q9UKR5 140 aa13.01□□□□□ -0.33
UBR7-204ENST00000554232 HERVK_113P61574 105 aa13□□□□□ -0.33
UBR7-204ENST00000554232 FLG2Q5D862 2391 aaPredicted RBP13□□□□□ -0.33
UBR7-204ENST00000554232 SYS1-DBNDD2H3BUS1 97 aa12.99□□□□□ -0.33
UBR7-204ENST00000554232 PFN2P35080 140 aa12.99□□□□□ -0.33
UBR7-204ENST00000554232 COX17Q14061 63 aa12.99□□□□□ -0.33
UBR7-204ENST00000554232 HNRNPA3P51991 378 aaKnown RBP12.97□□□□□ -0.33
UBR7-204ENST00000554232 SERTAD4-AS1Q5TG53 156 aa12.96□□□□□ -0.33
UBR7-204ENST00000554232 KRTAP7-1Q8IUC3 87 aa12.96□□□□□ -0.33
UBR7-204ENST00000554232 PLEKHB2Q96CS7 222 aa12.96□□□□□ -0.33
UBR7-204ENST00000554232 LEPROTO15243 131 aa12.95□□□□□ -0.34
UBR7-204ENST00000554232 HERV-K104P63124 156 aa12.95□□□□□ -0.34
UBR7-204ENST00000554232 UBE2BP63146 152 aa12.95□□□□□ -0.34
UBR7-204ENST00000554232 PET117Q6UWS5 81 aa12.95□□□□□ -0.34
UBR7-204ENST00000554232 PKHD1L1Q86WI1 4243 aa12.95□□□□□ -0.34
UBR7-204ENST00000554232 PSORS1C2Q9UIG4 136 aa12.94□□□□□ -0.34
UBR7-204ENST00000554232 LINC01545Q5VT33 79 aa12.93□□□□□ -0.34
UBR7-204ENST00000554232 NDUFA12Q9UI09 145 aa12.93□□□□□ -0.34
UBR7-204ENST00000554232 PLA2G2DQ9UNK4 145 aa12.93□□□□□ -0.34
UBR7-204ENST00000554232 MYMXA0A1B0GTQ4 84 aa12.92□□□□□ -0.34
UBR7-204ENST00000554232 C3orf79P0CE67 100 aa12.92□□□□□ -0.34
UBR7-204ENST00000554232 KRTDAPP60985 99 aa12.92□□□□□ -0.34
UBR7-204ENST00000554232 MEIG1Q5JSS6 88 aa12.92□□□□□ -0.34
UBR7-204ENST00000554232 TP73-AS1Q9UF72 201 aa12.92□□□□□ -0.34
UBR7-204ENST00000554232 LINC00158P58513 81 aa12.91□□□□□ -0.34
UBR7-204ENST00000554232 TSPEAR-AS2P59090 65 aa12.91□□□□□ -0.34
UBR7-204ENST00000554232 LBHQ53QV2 105 aaPredicted RBP12.91□□□□□ -0.34
UBR7-204ENST00000554232 SND1-IT1Q9HBX3 110 aa12.91□□□□□ -0.34
UBR7-204ENST00000554232 C22orf24Q9Y442 160 aa12.91□□□□□ -0.34
UBR7-204ENST00000554232 LINC00587B1AMM8 73 aa12.9□□□□□ -0.34
UBR7-204ENST00000554232 J3QQQ9 107 aa12.9□□□□□ -0.34
UBR7-204ENST00000554232 LGALS3P17931 250 aaKnown RBP12.9□□□□□ -0.34
UBR7-204ENST00000554232 C1orf137Q5JT78 98 aa12.9□□□□□ -0.34
UBR7-204ENST00000554232 C20orf202A1L168 122 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms