RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 SYCNQ0VAF6 134 aa5.28□□□□□ -1.56
TROAP-208ENST00000548817 FOXI1Q12951 378 aa5.28□□□□□ -1.56
TROAP-208ENST00000548817 LINC01545Q5VT33 79 aa5.28□□□□□ -1.56
TROAP-208ENST00000548817 ORAOV1Q8WV07 137 aa5.28□□□□□ -1.56
TROAP-208ENST00000548817 RPL39LQ96EH5 51 aaKnown RBP5.28□□□□□ -1.56
TROAP-208ENST00000548817 LINC00959A0A1B0GUT2 108 aa5.27□□□□□ -1.57
TROAP-208ENST00000548817 D6R8Y8 96 aa5.27□□□□□ -1.57
TROAP-208ENST00000548817 K7EMI3 77 aa5.27□□□□□ -1.57
TROAP-208ENST00000548817 DLEU1O43261 78 aa5.27□□□□□ -1.57
TROAP-208ENST00000548817 ATP5LO75964 103 aa5.27□□□□□ -1.57
TROAP-208ENST00000548817 MALP21145 153 aa5.27□□□□□ -1.57
TROAP-208ENST00000548817 SMAGPQ0VAQ4 97 aa5.27□□□□□ -1.57
TROAP-208ENST00000548817 LCE2DQ5TA82 110 aaPredicted RBP5.27□□□□□ -1.57
TROAP-208ENST00000548817 MRAP2Q96G30 205 aa5.27□□□□□ -1.57
TROAP-208ENST00000548817 LOC107984640A0A0U1RRK4 108 aa5.26□□□□□ -1.57
TROAP-208ENST00000548817 GAGE2BQ13066 116 aa5.26□□□□□ -1.57
TROAP-208ENST00000548817 MRPL51Q4U2R6 128 aaKnown RBP5.26□□□□□ -1.57
TROAP-208ENST00000548817 CD164L2Q6UWJ8 174 aa5.26□□□□□ -1.57
TROAP-208ENST00000548817 IFI27L1Q96BM0 104 aa5.26□□□□□ -1.57
TROAP-208ENST00000548817 LINC00526Q96FQ7 95 aa5.26□□□□□ -1.57
TROAP-208ENST00000548817 URB1-AS1Q96HZ7 61 aa5.26□□□□□ -1.57
TROAP-208ENST00000548817 LINC01546A6NGU7 62 aa5.25□□□□□ -1.57
TROAP-208ENST00000548817 PRSS47A8MTI9 375 aa5.25□□□□□ -1.57
TROAP-208ENST00000548817 COX8AP10176 69 aa5.25□□□□□ -1.57
TROAP-208ENST00000548817 FCER1GP30273 86 aa5.25□□□□□ -1.57
TROAP-208ENST00000548817 IFI27P40305 119 aaPredicted RBP5.25□□□□□ -1.57
TROAP-208ENST00000548817 SEC11AP67812 179 aa5.25□□□□□ -1.57
TROAP-208ENST00000548817 AMN1Q8IY45 258 aa5.25□□□□□ -1.57
TROAP-208ENST00000548817 ATOH7Q8N100 152 aa5.25□□□□□ -1.57
TROAP-208ENST00000548817 IGLV4-69A0A075B6H9 119 aa5.24□□□□□ -1.57
TROAP-208ENST00000548817 TRBV6-5A0A0K0K1A5 114 aa5.24□□□□□ -1.57
TROAP-208ENST00000548817 LOC389332A0A1B0GUA5 103 aa5.24□□□□□ -1.57
TROAP-208ENST00000548817 A6NDN8 102 aa5.24□□□□□ -1.57
TROAP-208ENST00000548817 COX7A2LO14548 114 aa5.24□□□□□ -1.57
TROAP-208ENST00000548817 APOMO95445 188 aa5.24□□□□□ -1.57
TROAP-208ENST00000548817 HINT1P49773 126 aaPredicted RBP5.24□□□□□ -1.57
TROAP-208ENST00000548817 PTTG1IPP53801 180 aa5.24□□□□□ -1.57
TROAP-208ENST00000548817 SRSF9Q13242 221 aaKnown RBP eCLIP5.24□□□□□ -1.57
TROAP-208ENST00000548817 Q8N8P6 123 aa5.24□□□□□ -1.57
TROAP-208ENST00000548817 CAMK2N2Q96S95 79 aa5.24□□□□□ -1.57
TROAP-208ENST00000548817 CDC42SE2Q9NRR3 84 aa5.24□□□□□ -1.57
TROAP-208ENST00000548817 TNFRSF6BO95407 300 aa5.23□□□□□ -1.57
TROAP-208ENST00000548817 TSHBP01222 138 aa5.23□□□□□ -1.57
TROAP-208ENST00000548817 ORMDL2Q53FV1 153 aa5.23□□□□□ -1.57
TROAP-208ENST00000548817 C20orf78Q9BR46 151 aa5.23□□□□□ -1.57
TROAP-208ENST00000548817 H0Y8G0 127 aa5.22□□□□□ -1.57
TROAP-208ENST00000548817 VCYO14598 125 aa5.22□□□□□ -1.57
TROAP-208ENST00000548817 RPL18AQ02543 176 aaKnown RBP5.22□□□□□ -1.57
TROAP-208ENST00000548817 TRAV13-1A0A0B4J241 112 aa5.21□□□□□ -1.58
TROAP-208ENST00000548817 TRBV27A0A0K0K1C4 114 aa5.21□□□□□ -1.58
TROAP-208ENST00000548817 DPM2O94777 84 aa5.21□□□□□ -1.58
TROAP-208ENST00000548817 NPYP01303 97 aa5.21□□□□□ -1.58
TROAP-208ENST00000548817 PLNP26678 52 aa5.21□□□□□ -1.58
TROAP-208ENST00000548817 POLR2KP53803 58 aaKnown RBP5.21□□□□□ -1.58
TROAP-208ENST00000548817 HSD52Q0P140 79 aa5.21□□□□□ -1.58
TROAP-208ENST00000548817 UBE2V1Q13404 147 aa5.21□□□□□ -1.58
TROAP-208ENST00000548817 VAMP3Q15836 100 aa5.21□□□□□ -1.58
TROAP-208ENST00000548817 C9orf116Q5BN46 136 aaPredicted RBP5.21□□□□□ -1.58
TROAP-208ENST00000548817 C1orf137Q5JT78 98 aa5.21□□□□□ -1.58
TROAP-208ENST00000548817 BOD1L2Q8IYS8 172 aa5.21□□□□□ -1.58
TROAP-208ENST00000548817 C2orf48Q96LS8 159 aa5.21□□□□□ -1.58
TROAP-208ENST00000548817 KIR2DL4Q99706 377 aa5.21□□□□□ -1.58
TROAP-208ENST00000548817 CBY1Q9Y3M2 126 aa5.21□□□□□ -1.58
TROAP-208ENST00000548817 A0A1W2PNN7 141 aa5.2□□□□□ -1.58
TROAP-208ENST00000548817 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.2□□□□□ -1.58
TROAP-208ENST00000548817 IGKCP01834 107 aa5.2□□□□□ -1.58
TROAP-208ENST00000548817 PAPPA-AS1Q5QFB9 102 aa5.2□□□□□ -1.58
TROAP-208ENST00000548817 BVES-AS1Q5T3Y7 98 aa5.2□□□□□ -1.58
TROAP-208ENST00000548817 LINC00173Q6ZV60 143 aa5.2□□□□□ -1.58
TROAP-208ENST00000548817 GTF2H5Q6ZYL4 71 aa5.2□□□□□ -1.58
TROAP-208ENST00000548817 DIRC1Q969H9 104 aa5.2□□□□□ -1.58
TROAP-208ENST00000548817 PSORS1C2Q9UIG4 136 aa5.2□□□□□ -1.58
TROAP-208ENST00000548817 A0A087WZ39 114 aa5.19□□□□□ -1.58
TROAP-208ENST00000548817 TRAV12-1A0A0B4J245 112 aa5.19□□□□□ -1.58
TROAP-208ENST00000548817 RPL32P62910 135 aaKnown RBP5.19□□□□□ -1.58
TROAP-208ENST00000548817 SPAG11BQ08648 103 aa5.19□□□□□ -1.58
TROAP-208ENST00000548817 RNF151Q2KHN1 245 aa5.19□□□□□ -1.58
TROAP-208ENST00000548817 C5orf38Q86SI9 138 aa5.19□□□□□ -1.58
TROAP-208ENST00000548817 HIGD1BQ9P298 99 aa5.19□□□□□ -1.58
TROAP-208ENST00000548817 CSDC2Q9Y534 153 aaKnown RBP5.19□□□□□ -1.58
TROAP-208ENST00000548817 F8WDY8 70 aa5.18□□□□□ -1.58
TROAP-208ENST00000548817 SMKR1H3BMG3 65 aa5.18□□□□□ -1.58
TROAP-208ENST00000548817 H3BRM9 83 aa5.18□□□□□ -1.58
TROAP-208ENST00000548817 SUMO2P61956 95 aaKnown RBP5.18□□□□□ -1.58
TROAP-208ENST00000548817 TAL2Q16559 108 aa5.18□□□□□ -1.58
TROAP-208ENST00000548817 RNASE13Q5GAN3 156 aaKnown RBP5.18□□□□□ -1.58
TROAP-208ENST00000548817 PHF5AQ7RTV0 110 aaKnown RBP5.18□□□□□ -1.58
TROAP-208ENST00000548817 ERASQ7Z444 233 aa5.18□□□□□ -1.58
TROAP-208ENST00000548817 OPRPNQ99935 248 aaPredicted RBP5.18□□□□□ -1.58
TROAP-208ENST00000548817 SMIM2Q9BVW6 85 aa5.18□□□□□ -1.58
TROAP-208ENST00000548817 UBE2D4Q9Y2X8 147 aa5.18□□□□□ -1.58
TROAP-208ENST00000548817 A0A096LNJ9 63 aa5.17□□□□□ -1.58
TROAP-208ENST00000548817 NDUFA1O15239 70 aa5.17□□□□□ -1.58
TROAP-208ENST00000548817 NMUP48645 174 aa5.17□□□□□ -1.58
TROAP-208ENST00000548817 TIMM21Q9BVV7 248 aa5.17□□□□□ -1.58
TROAP-208ENST00000548817 IGLV7-43P04211 117 aa5.16□□□□□ -1.58
TROAP-208ENST00000548817 NPSP0C0P6 89 aa5.16□□□□□ -1.58
TROAP-208ENST00000548817 SMIM13P0DJ93 91 aa5.16□□□□□ -1.58
TROAP-208ENST00000548817 HERVK_113P61574 105 aa5.16□□□□□ -1.58
TROAP-208ENST00000548817 NRACQ8N912 160 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms