RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 HNRNPA3P51991 378 aaKnown RBP6.83□□□□□ -1.32
GCN1-202ENST00000547263 PMCHL1Q16048 86 aa6.83□□□□□ -1.32
GCN1-202ENST00000547263 C2orf82Q6UX34 121 aa6.83□□□□□ -1.32
GCN1-202ENST00000547263 CXCL5P42830 114 aa6.82□□□□□ -1.32
GCN1-202ENST00000547263 TRAV12-1A0A0B4J245 112 aa6.81□□□□□ -1.32
GCN1-202ENST00000547263 KRTAP29-1A8MX34 341 aaPredicted RBP6.81□□□□□ -1.32
GCN1-202ENST00000547263 NDUFC2-KCTD14E9PQ53 114 aa6.81□□□□□ -1.32
GCN1-202ENST00000547263 ZNF22P17026 224 aaPredicted RBP6.81□□□□□ -1.32
GCN1-202ENST00000547263 GAGE2BQ13066 116 aa6.81□□□□□ -1.32
GCN1-202ENST00000547263 C9orf116Q5BN46 136 aaPredicted RBP6.81□□□□□ -1.32
GCN1-202ENST00000547263 KRTAP7-1Q8IUC3 87 aa6.81□□□□□ -1.32
GCN1-202ENST00000547263 LINC00469Q8N7U9 141 aa6.81□□□□□ -1.32
GCN1-202ENST00000547263 F8VRH5 84 aa6.8□□□□□ -1.32
GCN1-202ENST00000547263 PACRGQ96M98 296 aaPredicted RBP6.8□□□□□ -1.32
GCN1-202ENST00000547263 C11orf86A6NJI1 115 aa6.79□□□□□ -1.32
GCN1-202ENST00000547263 PRSS2P07478 247 aa6.79□□□□□ -1.32
GCN1-202ENST00000547263 PRR3P79522 188 aaKnown RBP6.79□□□□□ -1.32
GCN1-202ENST00000547263 RPL18AQ02543 176 aaKnown RBP6.79□□□□□ -1.32
GCN1-202ENST00000547263 C6orf226Q5I0X4 101 aa6.79□□□□□ -1.32
GCN1-202ENST00000547263 C9orf129Q5T035 196 aaKnown RBP6.79□□□□□ -1.32
GCN1-202ENST00000547263 C7orf33Q8WU49 177 aa6.79□□□□□ -1.32
GCN1-202ENST00000547263 IFI27L1Q96BM0 104 aa6.79□□□□□ -1.32
GCN1-202ENST00000547263 DPH3Q96FX2 82 aa6.79□□□□□ -1.32
GCN1-202ENST00000547263 TOMM7Q9P0U1 55 aa6.79□□□□□ -1.32
GCN1-202ENST00000547263 NUPR1O60356 82 aa6.78□□□□□ -1.32
GCN1-202ENST00000547263 SERF1AO75920 110 aa6.78□□□□□ -1.32
GCN1-202ENST00000547263 COX7B2Q8TF08 81 aa6.78□□□□□ -1.32
GCN1-202ENST00000547263 MYCBP2O75592 4640 aa6.77□□□□□ -1.33
GCN1-202ENST00000547263 H3BRM9 83 aa6.77□□□□□ -1.33
GCN1-202ENST00000547263 HSBP1O75506 76 aa6.77□□□□□ -1.33
GCN1-202ENST00000547263 SCO1O75880 301 aa6.77□□□□□ -1.33
GCN1-202ENST00000547263 SPINK8P0C7L1 97 aa6.77□□□□□ -1.33
GCN1-202ENST00000547263 CKS1BP61024 79 aa6.77□□□□□ -1.33
GCN1-202ENST00000547263 SRSF9Q13242 221 aaKnown RBP eCLIP6.77□□□□□ -1.33
GCN1-202ENST00000547263 BAGE3Q86Y29 109 aa6.77□□□□□ -1.33
GCN1-202ENST00000547263 FAM19A2Q8N3H0 131 aa6.77□□□□□ -1.33
GCN1-202ENST00000547263 OXTP01178 125 aa6.76□□□□□ -1.33
GCN1-202ENST00000547263 CHTOPQ9Y3Y2 248 aaKnown RBP6.76□□□□□ -1.33
GCN1-202ENST00000547263 FAM168BA1KXE4 195 aa6.75□□□□□ -1.33
GCN1-202ENST00000547263 PKHD1L1Q86WI1 4243 aa6.75□□□□□ -1.33
GCN1-202ENST00000547263 TMEM223A0PJW6 202 aa6.74□□□□□ -1.33
GCN1-202ENST00000547263 HIST1H2BKO60814 126 aa6.74□□□□□ -1.33
GCN1-202ENST00000547263 HIST1H2BJP06899 126 aa6.74□□□□□ -1.33
GCN1-202ENST00000547263 HIST1H2BOP23527 126 aa6.74□□□□□ -1.33
GCN1-202ENST00000547263 HIST1H2BBP33778 126 aa6.74□□□□□ -1.33
GCN1-202ENST00000547263 NDUFA6P56556 154 aa6.74□□□□□ -1.33
GCN1-202ENST00000547263 HIST1H2BDP58876 126 aa6.74□□□□□ -1.33
GCN1-202ENST00000547263 HIST1H2BCP62807 126 aa6.74□□□□□ -1.33
GCN1-202ENST00000547263 HIST2H2BEQ16778 126 aa6.74□□□□□ -1.33
GCN1-202ENST00000547263 GAGE2EQ4V326 116 aa6.74□□□□□ -1.33
GCN1-202ENST00000547263 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.74□□□□□ -1.33
GCN1-202ENST00000547263 PHF5AQ7RTV0 110 aaKnown RBP6.74□□□□□ -1.33
GCN1-202ENST00000547263 KRTAP11-1Q8IUC1 163 aa6.74□□□□□ -1.33
GCN1-202ENST00000547263 HIST1H2BHQ93079 126 aa6.74□□□□□ -1.33
GCN1-202ENST00000547263 ZNF625Q96I27 306 aaPredicted RBP6.74□□□□□ -1.33
GCN1-202ENST00000547263 HIST1H2BNQ99877 126 aa6.74□□□□□ -1.33
GCN1-202ENST00000547263 HIST1H2BMQ99879 126 aa6.74□□□□□ -1.33
GCN1-202ENST00000547263 GAGE2DQ9UEU5 116 aa6.74□□□□□ -1.33
GCN1-202ENST00000547263 PLA2G2DQ9UNK4 145 aa6.74□□□□□ -1.33
GCN1-202ENST00000547263 DMBT1Q9UGM3 2413 aaPredicted RBP6.74□□□□□ -1.33
GCN1-202ENST00000547263 LEPROTL1O95214 131 aa6.73□□□□□ -1.33
GCN1-202ENST00000547263 COA6Q5JTJ3 125 aaKnown RBP6.73□□□□□ -1.33
GCN1-202ENST00000547263 SFTA2Q6UW10 78 aa6.73□□□□□ -1.33
GCN1-202ENST00000547263 PSORS1C2Q9UIG4 136 aa6.73□□□□□ -1.33
GCN1-202ENST00000547263 IGLV5-37A0A075B6J1 123 aa6.72□□□□□ -1.33
GCN1-202ENST00000547263 MT1HL1P0DM35 61 aa6.72□□□□□ -1.33
GCN1-202ENST00000547263 SERTAD4-AS1Q5TG53 156 aa6.72□□□□□ -1.33
GCN1-202ENST00000547263 TP73-AS1Q9UF72 201 aa6.72□□□□□ -1.33
GCN1-202ENST00000547263 COX17Q14061 63 aa6.71□□□□□ -1.34
GCN1-202ENST00000547263 TMEM170BQ5T4T1 132 aa6.71□□□□□ -1.34
GCN1-202ENST00000547263 SPINK6Q6UWN8 80 aa6.71□□□□□ -1.34
GCN1-202ENST00000547263 FAM19A5Q7Z5A7 132 aaPredicted RBP6.71□□□□□ -1.34
GCN1-202ENST00000547263 M0QXV9 152 aa6.7□□□□□ -1.34
GCN1-202ENST00000547263 XAGE1AQ9HD64 81 aa6.7□□□□□ -1.34
GCN1-202ENST00000547263 HSPB8Q9UJY1 196 aa6.7□□□□□ -1.34
GCN1-202ENST00000547263 ERG28Q9UKR5 140 aa6.69□□□□□ -1.34
GCN1-202ENST00000547263 C22orf24Q9Y442 160 aa6.69□□□□□ -1.34
GCN1-202ENST00000547263 LRP1Q07954 4544 aaKnown RBP6.69□□□□□ -1.34
GCN1-202ENST00000547263 IGLV7-43P04211 117 aa6.67□□□□□ -1.34
GCN1-202ENST00000547263 S100A1P23297 94 aa6.67□□□□□ -1.34
GCN1-202ENST00000547263 PLNP26678 52 aa6.67□□□□□ -1.34
GCN1-202ENST00000547263 LINC01600Q96MT4 127 aa6.67□□□□□ -1.34
GCN1-202ENST00000547263 FABP4P15090 132 aa6.66□□□□□ -1.34
GCN1-202ENST00000547263 MRPL55Q7Z7F7 128 aaKnown RBP6.66□□□□□ -1.34
GCN1-202ENST00000547263 SND1-IT1Q9HBX3 110 aa6.66□□□□□ -1.34
GCN1-202ENST00000547263 J3QL48 77 aa6.65□□□□□ -1.34
GCN1-202ENST00000547263 DPM2O94777 84 aa6.65□□□□□ -1.34
GCN1-202ENST00000547263 VPREB1P12018 145 aa6.65□□□□□ -1.34
GCN1-202ENST00000547263 TSPEAR-AS2P59090 65 aa6.65□□□□□ -1.34
GCN1-202ENST00000547263 KRTAP10-8P60410 259 aa6.65□□□□□ -1.34
GCN1-202ENST00000547263 HERV-K104P63124 156 aa6.65□□□□□ -1.34
GCN1-202ENST00000547263 LBHQ53QV2 105 aaPredicted RBP6.65□□□□□ -1.34
GCN1-202ENST00000547263 C1orf137Q5JT78 98 aa6.65□□□□□ -1.34
GCN1-202ENST00000547263 FAT3Q8TDW7 4589 aa6.65□□□□□ -1.35
GCN1-202ENST00000547263 SYS1-DBNDD2H3BUS1 97 aa6.64□□□□□ -1.35
GCN1-202ENST00000547263 LEPROTO15243 131 aa6.64□□□□□ -1.35
GCN1-202ENST00000547263 IGKCP01834 107 aa6.64□□□□□ -1.35
GCN1-202ENST00000547263 PFN2P35080 140 aa6.64□□□□□ -1.35
GCN1-202ENST00000547263 LINC01545Q5VT33 79 aa6.64□□□□□ -1.35
GCN1-202ENST00000547263 Q8NDZ9 215 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms