RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 FAM236CP0DP71 79 aa7.56□□□□□ -1.2
NPAS3-205ENST00000547068 PFN2P35080 140 aa7.56□□□□□ -1.2
NPAS3-205ENST00000547068 SS18Q15532 418 aa7.56□□□□□ -1.2
NPAS3-205ENST00000547068 ENHOQ6UWT2 76 aa7.56□□□□□ -1.2
NPAS3-205ENST00000547068 FAM19A1Q7Z5A9 133 aa7.56□□□□□ -1.2
NPAS3-205ENST00000547068 ZANQ9Y493 2812 aa7.56□□□□□ -1.2
NPAS3-205ENST00000547068 TMEM89A2RUT3 159 aa7.56□□□□□ -1.2
NPAS3-205ENST00000547068 PAX4O43316 350 aa7.56□□□□□ -1.2
NPAS3-205ENST00000547068 FSHBP01225 129 aa7.56□□□□□ -1.2
NPAS3-205ENST00000547068 CYSRT1A8MQ03 144 aa7.55□□□□□ -1.2
NPAS3-205ENST00000547068 A8MTW9 85 aa7.55□□□□□ -1.2
NPAS3-205ENST00000547068 UBE2L6O14933 153 aa7.55□□□□□ -1.2
NPAS3-205ENST00000547068 XCL1P47992 114 aa7.55□□□□□ -1.2
NPAS3-205ENST00000547068 XCL2Q9UBD3 114 aa7.55□□□□□ -1.2
NPAS3-205ENST00000547068 TLN2Q9Y4G6 2542 aa7.55□□□□□ -1.2
NPAS3-205ENST00000547068 JMJD7-PLA2G4BH0Y9G9 81 aa7.54□□□□□ -1.2
NPAS3-205ENST00000547068 DEFB112Q30KQ8 113 aa7.54□□□□□ -1.2
NPAS3-205ENST00000547068 OTOGQ6ZRI0 2925 aa7.54□□□□□ -1.2
NPAS3-205ENST00000547068 IGKV3OR2-268A0A0C4DH90 116 aa7.53□□□□□ -1.2
NPAS3-205ENST00000547068 SERP1Q9Y6X1 66 aa7.53□□□□□ -1.2
NPAS3-205ENST00000547068 HIVEP2P31629 2446 aa7.53□□□□□ -1.2
NPAS3-205ENST00000547068 TRGV1A0A0A0MS02 117 aa7.52□□□□□ -1.21
NPAS3-205ENST00000547068 IBA57-AS1B1ANH7 110 aa7.52□□□□□ -1.21
NPAS3-205ENST00000547068 K7EQD1 137 aa7.52□□□□□ -1.21
NPAS3-205ENST00000547068 INSP01308 110 aa7.52□□□□□ -1.21
NPAS3-205ENST00000547068 LYPD5Q6UWN5 251 aa7.52□□□□□ -1.21
NPAS3-205ENST00000547068 UBL5Q9BZL1 73 aa7.52□□□□□ -1.21
NPAS3-205ENST00000547068 TRBV10-1A0A0K0K1A3 114 aa7.52□□□□□ -1.21
NPAS3-205ENST00000547068 TRBV10-3A0A0K0K1G6 114 aa7.52□□□□□ -1.21
NPAS3-205ENST00000547068 TRBV6-4A0A1B0GX49 114 aa7.52□□□□□ -1.21
NPAS3-205ENST00000547068 Q6YL49 198 aa7.52□□□□□ -1.21
NPAS3-205ENST00000547068 PRO0628Q9UI54 55 aa7.52□□□□□ -1.21
NPAS3-205ENST00000547068 LINC00336Q6ZUF6 198 aa7.51□□□□□ -1.21
NPAS3-205ENST00000547068 EPM2AB3EWF7 344 aa7.51□□□□□ -1.21
NPAS3-205ENST00000547068 H7BZZ5 65 aa7.51□□□□□ -1.21
NPAS3-205ENST00000547068 SONP18583 2426 aaKnown RBP7.51□□□□□ -1.21
NPAS3-205ENST00000547068 INAFM1C9JVW0 142 aa7.5□□□□□ -1.21
NPAS3-205ENST00000547068 TMEM256-PLSCR3K7ERE1 68 aa7.5□□□□□ -1.21
NPAS3-205ENST00000547068 LINC00167Q96N53 147 aa7.5□□□□□ -1.21
NPAS3-205ENST00000547068 IGHV4-59P01825 116 aa7.49□□□□□ -1.21
NPAS3-205ENST00000547068 Q8N814 137 aa7.49□□□□□ -1.21
NPAS3-205ENST00000547068 MAP6D1Q9H9H5 199 aa7.49□□□□□ -1.21
NPAS3-205ENST00000547068 HIVEP1P15822 2718 aa7.49□□□□□ -1.21
NPAS3-205ENST00000547068 TRAV7A0A075B6U4 112 aa7.48□□□□□ -1.21
NPAS3-205ENST00000547068 RNASE1P07998 156 aaKnown RBP7.48□□□□□ -1.21
NPAS3-205ENST00000547068 SLURP1P55000 103 aa7.48□□□□□ -1.21
NPAS3-205ENST00000547068 TMEM86BQ8N661 226 aa7.48□□□□□ -1.21
NPAS3-205ENST00000547068 IGHV3OR16-9A0A0B4J2B5 98 aa7.47□□□□□ -1.21
NPAS3-205ENST00000547068 Q6ZTI0 123 aa7.47□□□□□ -1.21
NPAS3-205ENST00000547068 C1orf43Q9BWL3 253 aa7.47□□□□□ -1.21
NPAS3-205ENST00000547068 F8P00451 2351 aa7.47□□□□□ -1.21
NPAS3-205ENST00000547068 C2CD3Q4AC94 2353 aa7.47□□□□□ -1.21
NPAS3-205ENST00000547068 BCE1O60756 84 aa7.47□□□□□ -1.21
NPAS3-205ENST00000547068 DEFB136Q30KP8 78 aa7.47□□□□□ -1.21
NPAS3-205ENST00000547068 UBE2E2Q96LR5 201 aa7.47□□□□□ -1.21
NPAS3-205ENST00000547068 C11orf68Q9H3H3 251 aaKnown RBP7.47□□□□□ -1.21
NPAS3-205ENST00000547068 KLKP1Q107X0 134 aa7.46□□□□□ -1.21
NPAS3-205ENST00000547068 MAST4O15021 2626 aa7.46□□□□□ -1.22
NPAS3-205ENST00000547068 A0A087WZ39 114 aa7.46□□□□□ -1.22
NPAS3-205ENST00000547068 C6orf226Q5I0X4 101 aa7.46□□□□□ -1.22
NPAS3-205ENST00000547068 IGLV4-60A0A075B6I1 120 aa7.45□□□□□ -1.22
NPAS3-205ENST00000547068 IL17DQ8TAD2 202 aa7.45□□□□□ -1.22
NPAS3-205ENST00000547068 SNURFQ9Y675 71 aa7.45□□□□□ -1.22
NPAS3-205ENST00000547068 SMIM26A0A096LP01 95 aa7.45□□□□□ -1.22
NPAS3-205ENST00000547068 DNAJC9-AS1A6NH13 148 aa7.45□□□□□ -1.22
NPAS3-205ENST00000547068 C1orf158Q8N1D5 194 aa7.45□□□□□ -1.22
NPAS3-205ENST00000547068 RMI2Q96E14 147 aa7.44□□□□□ -1.22
NPAS3-205ENST00000547068 MXRA5Q9NR99 2828 aa7.44□□□□□ -1.22
NPAS3-205ENST00000547068 NANOS2P60321 138 aaKnown RBP7.44□□□□□ -1.22
NPAS3-205ENST00000547068 PRR3P79522 188 aaKnown RBP7.44□□□□□ -1.22
NPAS3-205ENST00000547068 C18orf65Q6ZTR6 163 aa7.44□□□□□ -1.22
NPAS3-205ENST00000547068 DYNLRB2Q8TF09 96 aa7.44□□□□□ -1.22
NPAS3-205ENST00000547068 MTORP42345 2549 aa7.44□□□□□ -1.22
NPAS3-205ENST00000547068 LOC100131303A0A0U1RQF7 123 aa7.43□□□□□ -1.22
NPAS3-205ENST00000547068 F8WEM9 126 aa7.43□□□□□ -1.22
NPAS3-205ENST00000547068 HAMPP81172 84 aa7.43□□□□□ -1.22
NPAS3-205ENST00000547068 FP248Q71RG6 208 aaPredicted RBP7.43□□□□□ -1.22
NPAS3-205ENST00000547068 C16orf95Q9H693 158 aa7.43□□□□□ -1.22
NPAS3-205ENST00000547068 TRAV10A0A0B4J240 114 aa7.43□□□□□ -1.22
NPAS3-205ENST00000547068 LINC01547P58512 204 aaPredicted RBP7.43□□□□□ -1.22
NPAS3-205ENST00000547068 RBM3P98179 157 aaKnown RBP7.43□□□□□ -1.22
NPAS3-205ENST00000547068 ESM1Q9NQ30 184 aa7.43□□□□□ -1.22
NPAS3-205ENST00000547068 RPL35AP18077 110 aaKnown RBP7.42□□□□□ -1.22
NPAS3-205ENST00000547068 Q6ZQT0 140 aa7.42□□□□□ -1.22
NPAS3-205ENST00000547068 LINC00482Q8N8I6 264 aa7.42□□□□□ -1.22
NPAS3-205ENST00000547068 NOP10Q9NPE3 64 aaKnown RBP7.42□□□□□ -1.22
NPAS3-205ENST00000547068 STHQ8IWL8 128 aa7.42□□□□□ -1.22
NPAS3-205ENST00000547068 PKIGQ9Y2B9 76 aa7.42□□□□□ -1.22
NPAS3-205ENST00000547068 KHDC1LQ5JSQ8 128 aa7.41□□□□□ -1.22
NPAS3-205ENST00000547068 FN1P02751 2386 aaKnown RBP7.41□□□□□ -1.22
NPAS3-205ENST00000547068 LAMTOR3Q9UHA4 124 aa7.4□□□□□ -1.22
NPAS3-205ENST00000547068 NSD1Q96L73 2696 aaPredicted RBP7.4□□□□□ -1.22
NPAS3-205ENST00000547068 ANK3Q12955 4377 aaKnown RBP7.4□□□□□ -1.23
NPAS3-205ENST00000547068 TRGV2A0A075B6R0 118 aa7.4□□□□□ -1.23
NPAS3-205ENST00000547068 TRBV6-8A0A0A6YYG3 113 aa7.4□□□□□ -1.23
NPAS3-205ENST00000547068 Q6ZVQ6 151 aa7.4□□□□□ -1.23
NPAS3-205ENST00000547068 TEP1Q99973 2627 aaKnown RBP7.4□□□□□ -1.23
NPAS3-205ENST00000547068 LOC110117498A0A087WWA1 95 aa7.39□□□□□ -1.23
NPAS3-205ENST00000547068 TRBV7-6A0A0J9YX20 115 aa7.39□□□□□ -1.23
NPAS3-205ENST00000547068 LINC00959A0A1B0GUT2 108 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms