RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 HIST1H2BJP06899 126 aa3.71□□□□□ -1.82
CPSF7-222ENST00000544585 ARMS2P0C7Q2 107 aa3.71□□□□□ -1.82
CPSF7-222ENST00000544585 HIST1H2BOP23527 126 aa3.71□□□□□ -1.82
CPSF7-222ENST00000544585 HIST1H2BBP33778 126 aa3.71□□□□□ -1.82
CPSF7-222ENST00000544585 HIST1H2BDP58876 126 aa3.71□□□□□ -1.82
CPSF7-222ENST00000544585 HIST1H2BCP62807 126 aa3.71□□□□□ -1.82
CPSF7-222ENST00000544585 HIST2H2BEQ16778 126 aa3.71□□□□□ -1.82
CPSF7-222ENST00000544585 MPV17L2Q567V2 206 aa3.71□□□□□ -1.82
CPSF7-222ENST00000544585 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.71□□□□□ -1.82
CPSF7-222ENST00000544585 FAM74A4Q5TZK3 123 aa3.71□□□□□ -1.82
CPSF7-222ENST00000544585 KRTAP26-1Q6PEX3 210 aa3.71□□□□□ -1.82
CPSF7-222ENST00000544585 FAM19A1Q7Z5A9 133 aa3.71□□□□□ -1.82
CPSF7-222ENST00000544585 TMEM75Q8N9X5 138 aa3.71□□□□□ -1.82
CPSF7-222ENST00000544585 C5orf17Q8NAS9 161 aa3.71□□□□□ -1.82
CPSF7-222ENST00000544585 HIST1H2BHQ93079 126 aa3.71□□□□□ -1.82
CPSF7-222ENST00000544585 HIST1H2BNQ99877 126 aa3.71□□□□□ -1.82
CPSF7-222ENST00000544585 HIST1H2BMQ99879 126 aa3.71□□□□□ -1.82
CPSF7-222ENST00000544585 SMIM7Q9BQ49 75 aa3.71□□□□□ -1.82
CPSF7-222ENST00000544585 EPDR1Q9UM22 224 aa3.71□□□□□ -1.82
CPSF7-222ENST00000544585 PHLDA3Q9Y5J5 127 aa3.71□□□□□ -1.82
CPSF7-222ENST00000544585 A0A1B0GVX0 72 aa3.7□□□□□ -1.82
CPSF7-222ENST00000544585 DLEU1O43261 78 aa3.7□□□□□ -1.82
CPSF7-222ENST00000544585 TRGC2P03986 189 aa3.7□□□□□ -1.82
CPSF7-222ENST00000544585 TLX1NBP0CAT3 122 aa3.7□□□□□ -1.82
CPSF7-222ENST00000544585 PSMB2P49721 201 aa3.7□□□□□ -1.82
CPSF7-222ENST00000544585 GNG5P63218 68 aa3.7□□□□□ -1.82
CPSF7-222ENST00000544585 ADIRFQ15847 76 aa3.7□□□□□ -1.82
CPSF7-222ENST00000544585 C6orf99Q4VX62 202 aa3.7□□□□□ -1.82
CPSF7-222ENST00000544585 PRNTQ86SH4 94 aa3.7□□□□□ -1.82
CPSF7-222ENST00000544585 HIST3H2BBQ8N257 126 aa3.7□□□□□ -1.82
CPSF7-222ENST00000544585 LINC00269Q8N2A0 174 aa3.7□□□□□ -1.82
CPSF7-222ENST00000544585 IMMP2LQ96T52 175 aa3.7□□□□□ -1.82
CPSF7-222ENST00000544585 TMEM238C9JI98 176 aa3.69□□□□□ -1.82
CPSF7-222ENST00000544585 TRGC1P0CF51 173 aa3.69□□□□□ -1.82
CPSF7-222ENST00000544585 DDTP30046 118 aa3.69□□□□□ -1.82
CPSF7-222ENST00000544585 CDC34P49427 236 aaPredicted RBP3.69□□□□□ -1.82
CPSF7-222ENST00000544585 COX6A2Q02221 97 aa3.69□□□□□ -1.82
CPSF7-222ENST00000544585 SMIM15Q7Z3B0 74 aa3.69□□□□□ -1.82
CPSF7-222ENST00000544585 MRPL52Q86TS9 123 aaKnown RBP3.69□□□□□ -1.82
CPSF7-222ENST00000544585 OR10D4PQ8NGN7 298 aa3.69□□□□□ -1.82
CPSF7-222ENST00000544585 LINC00474Q9P2X8 69 aa3.69□□□□□ -1.82
CPSF7-222ENST00000544585 IGLV10-54A0A075B6I4 117 aa3.68□□□□□ -1.82
CPSF7-222ENST00000544585 TRBV25-1A0A075B6N4 114 aa3.68□□□□□ -1.82
CPSF7-222ENST00000544585 TRAV9-1A0A075B6T8 112 aa3.68□□□□□ -1.82
CPSF7-222ENST00000544585 H3BVH4 76 aa3.68□□□□□ -1.82
CPSF7-222ENST00000544585 CXorf1O96002 111 aa3.68□□□□□ -1.82
CPSF7-222ENST00000544585 PYY3Q5JQD4 70 aa3.68□□□□□ -1.82
CPSF7-222ENST00000544585 ZNF664Q8N3J9 261 aa3.68□□□□□ -1.82
CPSF7-222ENST00000544585 TMEM167BQ9NRX6 74 aa3.68□□□□□ -1.82
CPSF7-222ENST00000544585 PSORS1C2Q9UIG4 136 aa3.68□□□□□ -1.82
CPSF7-222ENST00000544585 PKIGQ9Y2B9 76 aa3.68□□□□□ -1.82
CPSF7-222ENST00000544585 TRBV6-1A0A0K0K1D8 114 aa3.67□□□□□ -1.82
CPSF7-222ENST00000544585 A0A1W2PRE2 83 aa3.67□□□□□ -1.82
CPSF7-222ENST00000544585 GRIFINA4D1Z8 144 aa3.67□□□□□ -1.82
CPSF7-222ENST00000544585 TSTD3H0UI37 97 aa3.67□□□□□ -1.82
CPSF7-222ENST00000544585 M0QXV9 152 aa3.67□□□□□ -1.82
CPSF7-222ENST00000544585 M0R381 172 aa3.67□□□□□ -1.82
CPSF7-222ENST00000544585 HMGB3O15347 200 aaKnown RBP3.67□□□□□ -1.82
CPSF7-222ENST00000544585 NDUFS5O43920 106 aa3.67□□□□□ -1.82
CPSF7-222ENST00000544585 PPBPP02775 128 aa3.67□□□□□ -1.82
CPSF7-222ENST00000544585 FABP4P15090 132 aa3.67□□□□□ -1.82
CPSF7-222ENST00000544585 ZNF25P17030 456 aaPredicted RBP3.67□□□□□ -1.82
CPSF7-222ENST00000544585 JOSD1Q15040 202 aaPredicted RBP3.67□□□□□ -1.82
CPSF7-222ENST00000544585 LCE1FQ5T754 118 aa3.67□□□□□ -1.82
CPSF7-222ENST00000544585 NTM-AS1Q6ZSK4 140 aa3.67□□□□□ -1.82
CPSF7-222ENST00000544585 BOD1L2Q8IYS8 172 aa3.67□□□□□ -1.82
CPSF7-222ENST00000544585 C15orf56Q8N910 161 aa3.67□□□□□ -1.82
CPSF7-222ENST00000544585 PACRGQ96M98 296 aaPredicted RBP3.67□□□□□ -1.82
CPSF7-222ENST00000544585 HIST1H2BLQ99880 126 aa3.67□□□□□ -1.82
CPSF7-222ENST00000544585 DERL1Q9BUN8 251 aa3.67□□□□□ -1.82
CPSF7-222ENST00000544585 ZFP30Q9Y2G7 519 aa3.67□□□□□ -1.82
CPSF7-222ENST00000544585 ARL2-SNX15V9GYD0 113 aa3.67□□□□□ -1.82
CPSF7-222ENST00000544585 A0A096LNJ9 63 aa3.66□□□□□ -1.82
CPSF7-222ENST00000544585 IGHV1-24A0A0C4DH33 117 aa3.66□□□□□ -1.82
CPSF7-222ENST00000544585 IGKV2-24A0A0C4DH68 120 aa3.66□□□□□ -1.82
CPSF7-222ENST00000544585 APCSP02743 223 aa3.66□□□□□ -1.82
CPSF7-222ENST00000544585 ARL14EPLP0DKL9 152 aa3.66□□□□□ -1.82
CPSF7-222ENST00000544585 GCHFRP30047 84 aa3.66□□□□□ -1.82
CPSF7-222ENST00000544585 CRIP1P50238 77 aa3.66□□□□□ -1.82
CPSF7-222ENST00000544585 UBE2G2P60604 165 aa3.66□□□□□ -1.82
CPSF7-222ENST00000544585 ZNF56Q15929 161 aa3.66□□□□□ -1.82
CPSF7-222ENST00000544585 IQCJQ1A5X6 159 aa3.66□□□□□ -1.82
CPSF7-222ENST00000544585 CLPSL2Q6UWE3 100 aa3.66□□□□□ -1.82
CPSF7-222ENST00000544585 LINC01551Q86U37 167 aa3.66□□□□□ -1.82
CPSF7-222ENST00000544585 TRAV26-2A0A0B4J265 109 aa3.65□□□□□ -1.83
CPSF7-222ENST00000544585 CD164Q04900 197 aa3.65□□□□□ -1.83
CPSF7-222ENST00000544585 PMVKQ15126 192 aa3.65□□□□□ -1.83
CPSF7-222ENST00000544585 COX19Q49B96 90 aa3.65□□□□□ -1.83
CPSF7-222ENST00000544585 PDZD11Q5EBL8 140 aa3.65□□□□□ -1.83
CPSF7-222ENST00000544585 FAM162BQ5T6X4 162 aa3.65□□□□□ -1.83
CPSF7-222ENST00000544585 OR2D3Q8NGH3 330 aa3.65□□□□□ -1.83
CPSF7-222ENST00000544585 TRAPPC1Q9Y5R8 145 aa3.65□□□□□ -1.83
CPSF7-222ENST00000544585 MUC21A0A0G2JKD1 596 aa3.64□□□□□ -1.83
CPSF7-222ENST00000544585 BPY2O14599 106 aa3.64□□□□□ -1.83
CPSF7-222ENST00000544585 SH2D1AO60880 128 aa3.64□□□□□ -1.83
CPSF7-222ENST00000544585 SMIM17P0DL12 118 aa3.64□□□□□ -1.83
CPSF7-222ENST00000544585 DEFB116Q30KQ4 102 aa3.64□□□□□ -1.83
CPSF7-222ENST00000544585 PRO0628Q9UI54 55 aa3.64□□□□□ -1.83
CPSF7-222ENST00000544585 IGLV4-60A0A075B6I1 120 aa3.63□□□□□ -1.83
CPSF7-222ENST00000544585 TMSB15BA0A087X1C1 80 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms