RNA–Protein interactions for RNA: ENST00000543462.1

VEGFB-204, Transcript of vascular endothelial growth factor B, humanhuman

TSL 2

Gene VEGFB, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-204ENST00000543462 SPACA4Q8TDM5 124 aa6.32□□□□□ -1.4
VEGFB-204ENST00000543462 CHAC1Q9BUX1 264 aa6.32□□□□□ -1.4
VEGFB-204ENST00000543462 MRPL35Q9NZE8 188 aaKnown RBP6.32□□□□□ -1.4
VEGFB-204ENST00000543462 VPS13BQ7Z7G8 4022 aa6.32□□□□□ -1.4
VEGFB-204ENST00000543462 EPM2AB3EWF7 344 aa6.31□□□□□ -1.4
VEGFB-204ENST00000543462 PYY3Q5JQD4 70 aa6.31□□□□□ -1.4
VEGFB-204ENST00000543462 Q8IZM0 81 aa6.31□□□□□ -1.4
VEGFB-204ENST00000543462 LINC00469Q8N7U9 141 aa6.31□□□□□ -1.4
VEGFB-204ENST00000543462 GEMIN7Q9H840 131 aaKnown RBP6.31□□□□□ -1.4
VEGFB-204ENST00000543462 A0A096LNI7 61 aa6.3□□□□□ -1.4
VEGFB-204ENST00000543462 LEPROTL1O95214 131 aa6.3□□□□□ -1.4
VEGFB-204ENST00000543462 TLX1NBP0CAT3 122 aa6.3□□□□□ -1.4
VEGFB-204ENST00000543462 CHTF8P0CG12 524 aa6.3□□□□□ -1.4
VEGFB-204ENST00000543462 ODF1Q14990 250 aa6.3□□□□□ -1.4
VEGFB-204ENST00000543462 Q8N1X5 172 aa6.3□□□□□ -1.4
VEGFB-204ENST00000543462 CIRBP-AS1Q8TBR5 109 aa6.3□□□□□ -1.4
VEGFB-204ENST00000543462 CAMK2N2Q96S95 79 aa6.3□□□□□ -1.4
VEGFB-204ENST00000543462 KRTAP4-5Q9BYR2 181 aa6.3□□□□□ -1.4
VEGFB-204ENST00000543462 C6orf48Q9UBA6 75 aa6.3□□□□□ -1.4
VEGFB-204ENST00000543462 F8VRH5 84 aa6.29□□□□□ -1.4
VEGFB-204ENST00000543462 NDUFA1O15239 70 aa6.29□□□□□ -1.4
VEGFB-204ENST00000543462 C2orf82Q6UX34 121 aa6.29□□□□□ -1.4
VEGFB-204ENST00000543462 UNQ6190/PRO20217Q6UXQ8 127 aa6.29□□□□□ -1.4
VEGFB-204ENST00000543462 ABCA13Q86UQ4 5058 aa6.29□□□□□ -1.4
VEGFB-204ENST00000543462 TRBV30A0A0K0K1B3 111 aa6.28□□□□□ -1.4
VEGFB-204ENST00000543462 KRTAP10-4P60372 401 aaPredicted RBP6.28□□□□□ -1.4
VEGFB-204ENST00000543462 PLAC8Q9NZF1 115 aa6.28□□□□□ -1.4
VEGFB-204ENST00000543462 CHTOPQ9Y3Y2 248 aaKnown RBP6.28□□□□□ -1.4
VEGFB-204ENST00000543462 LOC107984640A0A0U1RRK4 108 aa6.27□□□□□ -1.41
VEGFB-204ENST00000543462 SPINK8P0C7L1 97 aa6.27□□□□□ -1.41
VEGFB-204ENST00000543462 PTTG1IPP53801 180 aa6.27□□□□□ -1.41
VEGFB-204ENST00000543462 HSPB8Q9UJY1 196 aa6.27□□□□□ -1.41
VEGFB-204ENST00000543462 PKIGQ9Y2B9 76 aa6.27□□□□□ -1.41
VEGFB-204ENST00000543462 A0A087WYN8 130 aa6.26□□□□□ -1.41
VEGFB-204ENST00000543462 TMEM223A0PJW6 202 aa6.26□□□□□ -1.41
VEGFB-204ENST00000543462 H3BRM9 83 aa6.26□□□□□ -1.41
VEGFB-204ENST00000543462 CXCL5P42830 114 aa6.26□□□□□ -1.41
VEGFB-204ENST00000543462 COX7B2Q8TF08 81 aa6.26□□□□□ -1.41
VEGFB-204ENST00000543462 PKHD1L1Q86WI1 4243 aa6.26□□□□□ -1.41
VEGFB-204ENST00000543462 Q6ZRP5 223 aa6.25□□□□□ -1.41
VEGFB-204ENST00000543462 ZNF625Q96I27 306 aaPredicted RBP6.25□□□□□ -1.41
VEGFB-204ENST00000543462 TOMM7Q9P0U1 55 aa6.25□□□□□ -1.41
VEGFB-204ENST00000543462 SRRM2Q9UQ35 2752 aaKnown RBP6.25□□□□□ -1.41
VEGFB-204ENST00000543462 PCLOQ9Y6V0 5065 aa6.24□□□□□ -1.41
VEGFB-204ENST00000543462 IGKV2-24A0A0C4DH68 120 aa6.24□□□□□ -1.41
VEGFB-204ENST00000543462 SYS1-DBNDD2H3BUS1 97 aa6.24□□□□□ -1.41
VEGFB-204ENST00000543462 PRSS2P07478 247 aa6.24□□□□□ -1.41
VEGFB-204ENST00000543462 C9orf116Q5BN46 136 aaPredicted RBP6.24□□□□□ -1.41
VEGFB-204ENST00000543462 Q5VSD8 79 aa6.24□□□□□ -1.41
VEGFB-204ENST00000543462 KRTAP7-1Q8IUC3 87 aa6.24□□□□□ -1.41
VEGFB-204ENST00000543462 LINC00474Q9P2X8 69 aa6.24□□□□□ -1.41
VEGFB-204ENST00000543462 NDUFC2-KCTD14E9PQ53 114 aa6.23□□□□□ -1.41
VEGFB-204ENST00000543462 TSTD3H0UI37 97 aa6.23□□□□□ -1.41
VEGFB-204ENST00000543462 SMR3BP02814 79 aaPredicted RBP6.23□□□□□ -1.41
VEGFB-204ENST00000543462 PLNP26678 52 aa6.23□□□□□ -1.41
VEGFB-204ENST00000543462 C6orf226Q5I0X4 101 aa6.23□□□□□ -1.41
VEGFB-204ENST00000543462 TMEM170BQ5T4T1 132 aa6.23□□□□□ -1.41
VEGFB-204ENST00000543462 LINC01545Q5VT33 79 aa6.23□□□□□ -1.41
VEGFB-204ENST00000543462 LINC00528Q8N1L1 170 aa6.23□□□□□ -1.41
VEGFB-204ENST00000543462 C3orf79P0CE67 100 aa6.22□□□□□ -1.41
VEGFB-204ENST00000543462 CKS1BP61024 79 aa6.22□□□□□ -1.41
VEGFB-204ENST00000543462 GAGE2BQ13066 116 aa6.22□□□□□ -1.41
VEGFB-204ENST00000543462 MAJINQ3KP22 176 aa6.22□□□□□ -1.41
VEGFB-204ENST00000543462 C9orf129Q5T035 196 aaKnown RBP6.22□□□□□ -1.41
VEGFB-204ENST00000543462 MAP1LC3CQ9BXW4 147 aa6.22□□□□□ -1.41
VEGFB-204ENST00000543462 A0A1W2PNN7 141 aa6.21□□□□□ -1.42
VEGFB-204ENST00000543462 C20orf202A1L168 122 aa6.21□□□□□ -1.42
VEGFB-204ENST00000543462 H0Y8G0 127 aa6.21□□□□□ -1.42
VEGFB-204ENST00000543462 DPM2O94777 84 aa6.21□□□□□ -1.42
VEGFB-204ENST00000543462 SCGB1D1O95968 90 aa6.21□□□□□ -1.42
VEGFB-204ENST00000543462 TSPEAR-AS2P59090 65 aa6.21□□□□□ -1.42
VEGFB-204ENST00000543462 RPL18AQ02543 176 aaKnown RBP6.21□□□□□ -1.42
VEGFB-204ENST00000543462 PET117Q6UWS5 81 aa6.21□□□□□ -1.42
VEGFB-204ENST00000543462 STPG4Q8N801 248 aa6.21□□□□□ -1.42
VEGFB-204ENST00000543462 PMCHL2Q9BQD1 86 aa6.21□□□□□ -1.42
VEGFB-204ENST00000543462 IGKCP01834 107 aa6.2□□□□□ -1.42
VEGFB-204ENST00000543462 FAM168BA1KXE4 195 aa6.19□□□□□ -1.42
VEGFB-204ENST00000543462 SFTA2Q6UW10 78 aa6.19□□□□□ -1.42
VEGFB-204ENST00000543462 LEPROTO15243 131 aa6.18□□□□□ -1.42
VEGFB-204ENST00000543462 KRTDAPP60985 99 aa6.18□□□□□ -1.42
VEGFB-204ENST00000543462 MYCBP2O75592 4640 aa6.17□□□□□ -1.42
VEGFB-204ENST00000543462 PCP4L1A6NKN8 68 aa6.17□□□□□ -1.42
VEGFB-204ENST00000543462 E9PLD3 99 aa6.17□□□□□ -1.42
VEGFB-204ENST00000543462 DDTP30046 118 aa6.17□□□□□ -1.42
VEGFB-204ENST00000543462 GAGE2EQ4V326 116 aa6.17□□□□□ -1.42
VEGFB-204ENST00000543462 VAMP8Q9BV40 100 aa6.17□□□□□ -1.42
VEGFB-204ENST00000543462 GAGE2DQ9UEU5 116 aa6.17□□□□□ -1.42
VEGFB-204ENST00000543462 ERG28Q9UKR5 140 aa6.17□□□□□ -1.42
VEGFB-204ENST00000543462 FLG2Q5D862 2391 aaPredicted RBP6.16□□□□□ -1.42
VEGFB-204ENST00000543462 FAM229AH3BQW9 127 aa6.16□□□□□ -1.42
VEGFB-204ENST00000543462 HNRNPA3P51991 378 aaKnown RBP6.16□□□□□ -1.42
VEGFB-204ENST00000543462 COX17Q14061 63 aa6.16□□□□□ -1.42
VEGFB-204ENST00000543462 SERTAD4-AS1Q5TG53 156 aa6.16□□□□□ -1.42
VEGFB-204ENST00000543462 KRTAP11-1Q8IUC1 163 aa6.16□□□□□ -1.42
VEGFB-204ENST00000543462 PLEKHB2Q96CS7 222 aa6.16□□□□□ -1.42
VEGFB-204ENST00000543462 XAGE1AQ9HD64 81 aa6.16□□□□□ -1.42
VEGFB-204ENST00000543462 PLA2G2DQ9UNK4 145 aa6.16□□□□□ -1.42
VEGFB-204ENST00000543462 IGLV5-37A0A075B6J1 123 aa6.15□□□□□ -1.42
VEGFB-204ENST00000543462 J3QQQ9 107 aa6.15□□□□□ -1.42
VEGFB-204ENST00000543462 PLA2G1BP04054 148 aaKnown RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms