RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 HECTD4Q9Y4D8 3996 aa15.02■□□□□ -0
HOMER3-205ENST00000542541 E9PLD3 99 aa15.02□□□□□ -0.01
HOMER3-205ENST00000542541 SFTA2Q6UW10 78 aa15.02□□□□□ -0.01
HOMER3-205ENST00000542541 EPPK1P58107 5090 aaKnown RBP15.01□□□□□ -0.01
HOMER3-205ENST00000542541 C2orf82Q6UX34 121 aa15.01□□□□□ -0.01
HOMER3-205ENST00000542541 Q6ZRU5 148 aa15.01□□□□□ -0.01
HOMER3-205ENST00000542541 HSBP1L1C9JCN9 74 aa15□□□□□ -0.01
HOMER3-205ENST00000542541 UNQ6190/PRO20217Q6UXQ8 127 aa15□□□□□ -0.01
HOMER3-205ENST00000542541 C9orf163Q8N9P6 203 aa14.99□□□□□ -0.01
HOMER3-205ENST00000542541 J3QQQ9 107 aa14.99□□□□□ -0.01
HOMER3-205ENST00000542541 TRBV30A0A0K0K1B3 111 aa14.98□□□□□ -0.01
HOMER3-205ENST00000542541 LGALS3P17931 250 aaKnown RBP14.98□□□□□ -0.01
HOMER3-205ENST00000542541 RNF151Q2KHN1 245 aa14.98□□□□□ -0.01
HOMER3-205ENST00000542541 FUSP35637 526 aaKnown RBP eCLIP14.97□□□□□ -0.01
HOMER3-205ENST00000542541 C10orf25Q5T742 122 aa14.97□□□□□ -0.01
HOMER3-205ENST00000542541 PKIGQ9Y2B9 76 aa14.95□□□□□ -0.02
HOMER3-205ENST00000542541 NMUP48645 174 aa14.95□□□□□ -0.02
HOMER3-205ENST00000542541 C6orf48Q9UBA6 75 aa14.95□□□□□ -0.02
HOMER3-205ENST00000542541 NDUFA12Q9UI09 145 aa14.95□□□□□ -0.02
HOMER3-205ENST00000542541 MYMXA0A1B0GTQ4 84 aa14.94□□□□□ -0.02
HOMER3-205ENST00000542541 GCSHP23434 173 aa14.94□□□□□ -0.02
HOMER3-205ENST00000542541 PYY3Q5JQD4 70 aa14.94□□□□□ -0.02
HOMER3-205ENST00000542541 ZNF625Q96I27 306 aaPredicted RBP14.94□□□□□ -0.02
HOMER3-205ENST00000542541 TSPEAR-AS2P59090 65 aa14.93□□□□□ -0.02
HOMER3-205ENST00000542541 ANKRD39Q53RE8 183 aa14.93□□□□□ -0.02
HOMER3-205ENST00000542541 PKHD1P08F94 4074 aa14.92□□□□□ -0.02
HOMER3-205ENST00000542541 HERV-K104P63124 156 aa14.92□□□□□ -0.02
HOMER3-205ENST00000542541 MAJINQ3KP22 176 aa14.92□□□□□ -0.02
HOMER3-205ENST00000542541 IGKV2D-26A0A0A0MRZ7 120 aa14.91□□□□□ -0.02
HOMER3-205ENST00000542541 C16orf90A8MZG2 172 aa14.91□□□□□ -0.02
HOMER3-205ENST00000542541 LINC01620Q4KN68 170 aa14.9□□□□□ -0.02
HOMER3-205ENST00000542541 LOC107984640A0A0U1RRK4 108 aa14.89□□□□□ -0.03
HOMER3-205ENST00000542541 SDIM1Q6ZPB5 146 aa14.89□□□□□ -0.03
HOMER3-205ENST00000542541 VAMP8Q9BV40 100 aa14.88□□□□□ -0.03
HOMER3-205ENST00000542541 LINC00587B1AMM8 73 aa14.88□□□□□ -0.03
HOMER3-205ENST00000542541 C9orf116Q5BN46 136 aaPredicted RBP14.88□□□□□ -0.03
HOMER3-205ENST00000542541 LOC105371267A0A1B0GV96 52 aa14.87□□□□□ -0.03
HOMER3-205ENST00000542541 TLX1NBP0CAT3 122 aa14.87□□□□□ -0.03
HOMER3-205ENST00000542541 COX17Q14061 63 aa14.86□□□□□ -0.03
HOMER3-205ENST00000542541 ERG28Q9UKR5 140 aa14.86□□□□□ -0.03
HOMER3-205ENST00000542541 ZNF815PA8K554 130 aa14.85□□□□□ -0.03
HOMER3-205ENST00000542541 NDUFC2-KCTD14E9PQ53 114 aa14.85□□□□□ -0.03
HOMER3-205ENST00000542541 DNAH5Q8TE73 4624 aa14.85□□□□□ -0.03
HOMER3-205ENST00000542541 RPL18AQ02543 176 aaKnown RBP14.84□□□□□ -0.03
HOMER3-205ENST00000542541 MEIG1Q5JSS6 88 aa14.84□□□□□ -0.03
HOMER3-205ENST00000542541 PAM16Q9Y3D7 125 aa14.84□□□□□ -0.03
HOMER3-205ENST00000542541 DYNC1H1Q14204 4646 aaKnown RBP14.83□□□□□ -0.04
HOMER3-205ENST00000542541 PFN2P35080 140 aa14.83□□□□□ -0.04
HOMER3-205ENST00000542541 KRTAP10-1P60331 282 aa14.82□□□□□ -0.04
HOMER3-205ENST00000542541 SPATA45Q537H7 98 aa14.82□□□□□ -0.04
HOMER3-205ENST00000542541 TTTY13Q9BZ97 58 aa14.82□□□□□ -0.04
HOMER3-205ENST00000542541 LINC00474Q9P2X8 69 aa14.82□□□□□ -0.04
HOMER3-205ENST00000542541 GAGE2BQ13066 116 aa14.81□□□□□ -0.04
HOMER3-205ENST00000542541 PCP2Q8IVA1 136 aa14.81□□□□□ -0.04
HOMER3-205ENST00000542541 LINC00158P58513 81 aa14.81□□□□□ -0.04
HOMER3-205ENST00000542541 S100A12P80511 92 aa14.81□□□□□ -0.04
HOMER3-205ENST00000542541 CIRBPQ14011 172 aaKnown RBP14.81□□□□□ -0.04
HOMER3-205ENST00000542541 Q6ZRP5 223 aa14.81□□□□□ -0.04
HOMER3-205ENST00000542541 A0A0J9YXY3 114 aa14.8□□□□□ -0.04
HOMER3-205ENST00000542541 PTTG1IPP53801 180 aa14.8□□□□□ -0.04
HOMER3-205ENST00000542541 A0A096LNI7 61 aa14.79□□□□□ -0.04
HOMER3-205ENST00000542541 GAGE2EQ4V326 116 aa14.79□□□□□ -0.04
HOMER3-205ENST00000542541 GAGE2DQ9UEU5 116 aa14.79□□□□□ -0.04
HOMER3-205ENST00000542541 IGKV2-24A0A0C4DH68 120 aa14.78□□□□□ -0.04
HOMER3-205ENST00000542541 SMIM6P0DI80 62 aa14.78□□□□□ -0.04
HOMER3-205ENST00000542541 SMIM13P0DJ93 91 aa14.78□□□□□ -0.04
HOMER3-205ENST00000542541 SCGB1D4Q6XE38 83 aa14.78□□□□□ -0.04
HOMER3-205ENST00000542541 DPH3Q96FX2 82 aa14.77□□□□□ -0.04
HOMER3-205ENST00000542541 A0A0U1RRA0 63 aa14.76□□□□□ -0.05
HOMER3-205ENST00000542541 COX8AP10176 69 aa14.76□□□□□ -0.05
HOMER3-205ENST00000542541 TIMM17BO60830 172 aa14.74□□□□□ -0.05
HOMER3-205ENST00000542541 CHTF8P0CG12 524 aa14.74□□□□□ -0.05
HOMER3-205ENST00000542541 Q6ZSA8 131 aa14.74□□□□□ -0.05
HOMER3-205ENST00000542541 BOD1L2Q8IYS8 172 aa14.74□□□□□ -0.05
HOMER3-205ENST00000542541 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.74□□□□□ -0.05
HOMER3-205ENST00000542541 SPACA4Q8TDM5 124 aa14.73□□□□□ -0.05
HOMER3-205ENST00000542541 C14orf144Q96I85 54 aa14.73□□□□□ -0.05
HOMER3-205ENST00000542541 LRP1BQ9NZR2 4599 aa14.72□□□□□ -0.05
HOMER3-205ENST00000542541 DLEU1O43261 78 aa14.72□□□□□ -0.05
HOMER3-205ENST00000542541 MIR7-3HGQ8N6C7 128 aa14.72□□□□□ -0.05
HOMER3-205ENST00000542541 XAGE1AQ9HD64 81 aa14.72□□□□□ -0.05
HOMER3-205ENST00000542541 FAM30AQ9NZY2 134 aa14.72□□□□□ -0.05
HOMER3-205ENST00000542541 SND1-IT1Q9HBX3 110 aa14.71□□□□□ -0.05
HOMER3-205ENST00000542541 BIRC6Q9NR09 4857 aa14.71□□□□□ -0.05
HOMER3-205ENST00000542541 TMEM238C9JI98 176 aa14.7□□□□□ -0.06
HOMER3-205ENST00000542541 PANO1I0J062 215 aa14.7□□□□□ -0.06
HOMER3-205ENST00000542541 SLC25A34Q6PIV7 304 aa14.7□□□□□ -0.06
HOMER3-205ENST00000542541 C9orf129Q5T035 196 aaKnown RBP14.69□□□□□ -0.06
HOMER3-205ENST00000542541 LITAFQ99732 161 aa14.68□□□□□ -0.06
HOMER3-205ENST00000542541 ADAMTSL4-AS1Q5T5F5 129 aa14.67□□□□□ -0.06
HOMER3-205ENST00000542541 DAND5Q8N907 189 aa14.67□□□□□ -0.06
HOMER3-205ENST00000542541 A0A087WYN8 130 aa14.66□□□□□ -0.06
HOMER3-205ENST00000542541 MIEN1Q9BRT3 115 aa14.66□□□□□ -0.06
HOMER3-205ENST00000542541 Q6ZVH6 145 aa14.65□□□□□ -0.06
HOMER3-205ENST00000542541 SPANXDQ9BXN6 97 aa14.63□□□□□ -0.07
HOMER3-205ENST00000542541 SPANXCQ9NY87 97 aa14.63□□□□□ -0.07
HOMER3-205ENST00000542541 PLAC8Q9NZF1 115 aa14.63□□□□□ -0.07
HOMER3-205ENST00000542541 LOC107984156A0A0G2JMH3 177 aa14.63□□□□□ -0.07
HOMER3-205ENST00000542541 SCXQ7RTU7 201 aa14.63□□□□□ -0.07
HOMER3-205ENST00000542541 ARL17AQ8IVW1 177 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms