RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 COX6A2Q02221 97 aa4.93□□□□□ -1.62
MRPS35-204ENST00000542199 KIAA0087Q14695 138 aa4.93□□□□□ -1.62
MRPS35-204ENST00000542199 Q6ZRU5 148 aa4.93□□□□□ -1.62
MRPS35-204ENST00000542199 MRPL52Q86TS9 123 aaKnown RBP4.93□□□□□ -1.62
MRPS35-204ENST00000542199 BORCS7Q96B45 105 aa4.93□□□□□ -1.62
MRPS35-204ENST00000542199 EIF5A2Q9GZV4 153 aaKnown RBP4.93□□□□□ -1.62
MRPS35-204ENST00000542199 ST20Q9HBF5 79 aa4.93□□□□□ -1.62
MRPS35-204ENST00000542199 OSTCQ9NRP0 149 aa4.93□□□□□ -1.62
MRPS35-204ENST00000542199 TMEM242Q9NWH2 141 aa4.93□□□□□ -1.62
MRPS35-204ENST00000542199 LINC00959A0A1B0GUT2 108 aa4.92□□□□□ -1.62
MRPS35-204ENST00000542199 ZNF727A8MUV8 499 aa4.92□□□□□ -1.62
MRPS35-204ENST00000542199 SRP19P09132 144 aaKnown RBP4.92□□□□□ -1.62
MRPS35-204ENST00000542199 XCL1P47992 114 aa4.92□□□□□ -1.62
MRPS35-204ENST00000542199 Q6ZVH6 145 aa4.92□□□□□ -1.62
MRPS35-204ENST00000542199 AMN1Q8IY45 258 aa4.92□□□□□ -1.62
MRPS35-204ENST00000542199 MRAP2Q96G30 205 aa4.92□□□□□ -1.62
MRPS35-204ENST00000542199 BTF3L4Q96K17 158 aa4.92□□□□□ -1.62
MRPS35-204ENST00000542199 LINC00167Q96N53 147 aa4.92□□□□□ -1.62
MRPS35-204ENST00000542199 CDC42SE2Q9NRR3 84 aa4.92□□□□□ -1.62
MRPS35-204ENST00000542199 CSDC2Q9Y534 153 aaKnown RBP4.92□□□□□ -1.62
MRPS35-204ENST00000542199 V9GYV3 84 aa4.92□□□□□ -1.62
MRPS35-204ENST00000542199 C7orf77A4D0Y5 90 aa4.91□□□□□ -1.62
MRPS35-204ENST00000542199 CCL25O15444 150 aa4.91□□□□□ -1.62
MRPS35-204ENST00000542199 NUP35Q8NFH5 326 aa4.91□□□□□ -1.62
MRPS35-204ENST00000542199 DPH3Q96FX2 82 aa4.91□□□□□ -1.62
MRPS35-204ENST00000542199 A0A096LNI7 61 aa4.9□□□□□ -1.63
MRPS35-204ENST00000542199 IGHV1-58A0A0C4DH39 117 aa4.9□□□□□ -1.63
MRPS35-204ENST00000542199 IGKV2-24A0A0C4DH68 120 aa4.9□□□□□ -1.63
MRPS35-204ENST00000542199 SMKR1H3BMG3 65 aa4.9□□□□□ -1.63
MRPS35-204ENST00000542199 PPP1R17O96001 155 aa4.9□□□□□ -1.63
MRPS35-204ENST00000542199 ZNF664Q8N3J9 261 aa4.9□□□□□ -1.63
MRPS35-204ENST00000542199 ISOC2Q96AB3 205 aa4.9□□□□□ -1.63
MRPS35-204ENST00000542199 LINC00474Q9P2X8 69 aa4.9□□□□□ -1.63
MRPS35-204ENST00000542199 C9JQL5 133 aa4.89□□□□□ -1.63
MRPS35-204ENST00000542199 RPL23P62829 140 aaKnown RBP4.89□□□□□ -1.63
MRPS35-204ENST00000542199 PRR3P79522 188 aaKnown RBP4.89□□□□□ -1.63
MRPS35-204ENST00000542199 SS18Q15532 418 aa4.89□□□□□ -1.63
MRPS35-204ENST00000542199 TMEM241Q24JQ0 296 aa4.89□□□□□ -1.63
MRPS35-204ENST00000542199 LINC00526Q96FQ7 95 aa4.89□□□□□ -1.63
MRPS35-204ENST00000542199 CARD19Q96LW7 228 aa4.89□□□□□ -1.63
MRPS35-204ENST00000542199 NAT8BQ9UHF3 227 aa4.89□□□□□ -1.63
MRPS35-204ENST00000542199 PKIGQ9Y2B9 76 aa4.89□□□□□ -1.63
MRPS35-204ENST00000542199 TRBV24-1A0A075B6N3 115 aa4.88□□□□□ -1.63
MRPS35-204ENST00000542199 SMIM27A0A1W2PRY6 76 aa4.88□□□□□ -1.63
MRPS35-204ENST00000542199 C1orf196B1AJZ1 125 aa4.88□□□□□ -1.63
MRPS35-204ENST00000542199 PPP1R2P9O14990 202 aa4.88□□□□□ -1.63
MRPS35-204ENST00000542199 FCER1GP30273 86 aa4.88□□□□□ -1.63
MRPS35-204ENST00000542199 MRPL51Q4U2R6 128 aaKnown RBP4.88□□□□□ -1.63
MRPS35-204ENST00000542199 FAM104BQ5XKR9 115 aa4.88□□□□□ -1.63
MRPS35-204ENST00000542199 UBE2D4Q9Y2X8 147 aa4.88□□□□□ -1.63
MRPS35-204ENST00000542199 A0A1B0GVG6 124 aa4.87□□□□□ -1.63
MRPS35-204ENST00000542199 A0A1B0GW15 77 aa4.87□□□□□ -1.63
MRPS35-204ENST00000542199 LINC00862A6NCI5 91 aa4.87□□□□□ -1.63
MRPS35-204ENST00000542199 SYCNQ0VAF6 134 aa4.87□□□□□ -1.63
MRPS35-204ENST00000542199 SMAGPQ0VAQ4 97 aa4.87□□□□□ -1.63
MRPS35-204ENST00000542199 ADIRFQ15847 76 aa4.87□□□□□ -1.63
MRPS35-204ENST00000542199 C20orf78Q9BR46 151 aa4.87□□□□□ -1.63
MRPS35-204ENST00000542199 TIMM21Q9BVV7 248 aa4.87□□□□□ -1.63
MRPS35-204ENST00000542199 NAT8Q9UHE5 227 aa4.87□□□□□ -1.63
MRPS35-204ENST00000542199 COX7A2LO14548 114 aa4.86□□□□□ -1.63
MRPS35-204ENST00000542199 RNASE13Q5GAN3 156 aaKnown RBP4.86□□□□□ -1.63
MRPS35-204ENST00000542199 Q6ZUT4 128 aa4.86□□□□□ -1.63
MRPS35-204ENST00000542199 FAM104AQ969W3 186 aa4.86□□□□□ -1.63
MRPS35-204ENST00000542199 SMDT1Q9H4I9 107 aa4.86□□□□□ -1.63
MRPS35-204ENST00000542199 IGLV4-69A0A075B6H9 119 aa4.85□□□□□ -1.63
MRPS35-204ENST00000542199 TRAV13-1A0A0B4J241 112 aa4.85□□□□□ -1.63
MRPS35-204ENST00000542199 A0A1B0GXF2 115 aa4.85□□□□□ -1.63
MRPS35-204ENST00000542199 TCAPO15273 167 aa4.85□□□□□ -1.63
MRPS35-204ENST00000542199 CKS2P33552 79 aa4.85□□□□□ -1.63
MRPS35-204ENST00000542199 PEA15Q15121 130 aa4.85□□□□□ -1.63
MRPS35-204ENST00000542199 COA6Q5JTJ3 125 aaKnown RBP4.85□□□□□ -1.63
MRPS35-204ENST00000542199 LINC01600Q96MT4 127 aa4.85□□□□□ -1.63
MRPS35-204ENST00000542199 LOC107984640A0A0U1RRK4 108 aa4.84□□□□□ -1.63
MRPS35-204ENST00000542199 D6R8Y8 96 aa4.84□□□□□ -1.63
MRPS35-204ENST00000542199 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.84□□□□□ -1.63
MRPS35-204ENST00000542199 APOMO95445 188 aa4.84□□□□□ -1.63
MRPS35-204ENST00000542199 RPL39P62891 51 aaKnown RBP4.84□□□□□ -1.63
MRPS35-204ENST00000542199 HBBP68871 147 aa4.84□□□□□ -1.63
MRPS35-204ENST00000542199 SPINK6Q6UWN8 80 aa4.84□□□□□ -1.63
MRPS35-204ENST00000542199 CAMK2N2Q96S95 79 aa4.84□□□□□ -1.63
MRPS35-204ENST00000542199 SMIM2Q9BVW6 85 aa4.84□□□□□ -1.63
MRPS35-204ENST00000542199 SPANXA1Q9NS26 97 aa4.84□□□□□ -1.63
MRPS35-204ENST00000542199 IGHV3OR16-9A0A0B4J2B5 98 aa4.83□□□□□ -1.64
MRPS35-204ENST00000542199 A0A0J9YXV3 536 aa4.83□□□□□ -1.64
MRPS35-204ENST00000542199 A0A1W2PNN7 141 aa4.83□□□□□ -1.64
MRPS35-204ENST00000542199 NPYP01303 97 aa4.83□□□□□ -1.64
MRPS35-204ENST00000542199 S100A8P05109 93 aa4.83□□□□□ -1.64
MRPS35-204ENST00000542199 MRPS36P82909 103 aaKnown RBP4.83□□□□□ -1.64
MRPS35-204ENST00000542199 MRPL54Q6P161 138 aaKnown RBP4.83□□□□□ -1.64
MRPS35-204ENST00000542199 CAMK2N1Q7Z7J9 78 aa4.83□□□□□ -1.64
MRPS35-204ENST00000542199 C5orf38Q86SI9 138 aa4.83□□□□□ -1.64
MRPS35-204ENST00000542199 OR10D4PQ8NGN7 298 aa4.83□□□□□ -1.64
MRPS35-204ENST00000542199 LPAP08519 4548 aa4.83□□□□□ -1.64
MRPS35-204ENST00000542199 MUC2Q02817 5179 aa4.83□□□□□ -1.64
MRPS35-204ENST00000542199 F8W036 122 aa4.82□□□□□ -1.64
MRPS35-204ENST00000542199 PPBPP02775 128 aa4.82□□□□□ -1.64
MRPS35-204ENST00000542199 KRTAP10-8P60410 259 aa4.82□□□□□ -1.64
MRPS35-204ENST00000542199 SPAG11BQ08648 103 aa4.82□□□□□ -1.64
MRPS35-204ENST00000542199 ATP5L2Q7Z4Y8 100 aa4.82□□□□□ -1.64
MRPS35-204ENST00000542199 NMUP48645 174 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms